Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARF1

Gene Name Gene ID Reads Annotation
SCARF1 2103 scavenger receptor class F member 1, transcript variant X2











Genes with expression patterns similar to SCARF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCARF1 2103 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class F member 1, transcript variant X2
2. RFX3 ENSGALG00000010179 305 1.769 - - - - - - - 0.980 - 0.789 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
3. C7H2ORF76 ENSGALG00000012113 1947 0.986 - - - - - - - 0.986 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
4. CCNI ENSGALG00000011457 3203 0.985 - - - - - - - 0.985 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
5. PDCD7 ENSGALG00000021027 3807 0.984 - - - - - - - 0.984 - - programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
6. PNPT1 ENSGALG00000043545 1306 0.982 - - - - - - - 0.982 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
7. CLEC3B ENSGALG00000030969 363 0.981 - - - - - - - 0.981 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
8. BIN1 ENSGALG00000011541 2273 0.981 - - - - - - - 0.981 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
9. AGO1 ENSGALG00000002249 125 0.98 - - - - - - - 0.980 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
10. IBA57 ENSGALG00000005328 4362 0.98 - - - - - - - 0.980 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
11. ZNF148 ENSGALG00000012049 365 0.98 - - - - - - - 0.980 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
12. FRYL ENSGALG00000014103 314 0.98 - - - - - - - 0.980 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
13. ENSGALG00000026309 ENSGALG00000026309 360 0.979 - - - - - - - 0.979 - -
14. ECHDC3 ENSGALG00000006690 1299 0.979 - - - - - - - 0.979 - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
15. gga-mir-6681 ENSGALG00000027840 546 0.979 - - - - - - - 0.979 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
16. ENSGALG00000016701 ENSGALG00000016701 418 0.979 - - - - - - - 0.979 - -
17. ENSGALG00000021835 ENSGALG00000021835 424 0.979 - - - - - - - 0.979 - -
18. PRKAG2 ENSGALG00000006219 504 0.979 - - - - - - - 0.979 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
19. CHGA ENSGALG00000010820 1028 0.979 - - - - - - - 0.979 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
20. GMFB ENSGALG00000012208 894 0.979 - - - - - - - 0.979 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
21. CLASP2 ENSGALG00000032647 1821 0.978 - - - - - - - 0.978 - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
22. NGFR ENSGALG00000035950 13452 0.978 - - - - - - - 0.978 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
23. C16orf93 C16orf93 3351 0.978 - - - - - - - 0.978 - -
24. N4BP2L1 ENSGALG00000017072 1371 0.978 - - - - - - - 0.978 - - NEDD4 binding protein 2 like 1, transcript variant X2
25. xcc-b100_1894L ENSGALG00000007564 462 0.977 - - - - - - - 0.977 - - UPF0061 protein xcc-b100_1894-like
26. ENSGALG00000005785 ENSGALG00000005785 1570 0.977 - - - - - - - 0.977 - -
27. LRRC42 ENSGALG00000010743 384 0.976 - - - - - - - 0.976 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
28. COQ5 ENSGALG00000007185 5614 0.975 - - - - - - - 0.975 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
29. LMO4 ENSGALG00000006252 3686 0.975 - - - - - - - 0.975 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
30. TBC1D16 ENSGALG00000007054 2324 0.975 - - - - - - - 0.975 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
31. GHR_1 ENSGALG00000014855 198 0.975 - - - - - - - 0.975 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
32. SZT2 ENSGALG00000028561 255 0.975 - - - - - - - 0.975 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
33. CYB5R3 ENSGALG00000014122 7664 0.974 - - - - - - - 0.974 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
34. ENSGALG00000025773 ENSGALG00000025773 977 0.974 - - - - - - - 0.974 - -
35. ASAP2 ENSGALG00000016419 1393 0.974 - - - - - - - 0.974 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
36. FBXL7 ENSGALG00000031947 2480 0.973 - - - - - - - 0.973 - - F-box and leucine rich repeat protein 7 [Source:HGNC Symbol;Acc:HGNC:13604]
37. SENP2 ENSGALG00000031128 1162 0.973 - - - - - - - 0.973 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
38. THAP4 ENSGALG00000006283 1707 0.973 - - - - - - - 0.973 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
39. ALDH6 ALDH6 771 0.972 - - - - - - - 0.972 - -
40. MAN1A1 ENSGALG00000014878 1061 0.971 - - - - - - - 0.971 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
41. SIAH2 ENSGALG00000010395 2126 0.971 - - - - - - - 0.971 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
42. ZC3H11A ENSGALG00000000541 2712 0.971 - - - - - - - 0.971 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
43. GPR155 ENSGALG00000014209 1281 0.971 - - - - - - - 0.971 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
44. WBP4 ENSGALG00000016949 5858 0.97 - - - - - - - 0.970 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
45. YY1 ENSGALG00000017388 1933 0.97 - - - - - - - 0.970 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
46. SLC37A4 ENSGALG00000007716 2263 0.968 - - - - - - - 0.968 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
47. TBC1D19 ENSGALG00000029673 1868 0.968 - - - - - - - 0.968 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
48. SLC4A3 ENSGALG00000011224 2161 0.968 - - - - - - - 0.968 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
49. KIF3B ENSGALG00000006604 2968 0.967 - - - - - - - 0.967 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
50. ATP6V0E2 ENSGALG00000020754 2648 0.967 - - - - - - - 0.967 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
51. C5H15ORF57 C5H15ORF57 4113 0.966 - - - - - - - 0.966 - -
52. TTC17 ENSGALG00000039558 3301 0.966 - - - - - - - 0.966 - - tetratricopeptide repeat domain 17
53. CDC37L1 ENSGALG00000014448 2283 0.966 - - - - - - - 0.966 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
54. SURF2 ENSGALG00000003181 3500 0.965 - - - - - - - 0.965 - - surfeit 2 [Source:NCBI gene;Acc:417156]
55. BOC ENSGALG00000015152 4868 0.965 - - - - - - - 0.965 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
56. MED20 ENSGALG00000003474 4583 0.965 - - - - - - - 0.965 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
57. CLIC4 ENSGALG00000001262 11497 0.964 - - - - - - - 0.964 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
58. PDHX ENSGALG00000033753 2799 0.962 - - - - - - - 0.962 - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
59. POLR1E ENSGALG00000005395 8953 0.961 - - - - - - - 0.961 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
60. IDS ENSGALG00000009154 1177 0.958 - - - - - - - 0.958 - - iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
61. TRAPPC12 ENSGALG00000016387 2593 0.958 - - - - - - - 0.958 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
62. CNOT2 ENSGALG00000010042 7612 0.954 - - - - - - - 0.954 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
63. SLC35F6 ENSGALG00000016589 5172 0.954 - - - - - - - 0.954 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
64. BRF1 ENSGALG00000011705 3406 0.953 - - - - - - - 0.953 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
65. GTSE1 ENSGALG00000004897 2865 0.952 - - - - - - - 0.952 - - G2 and S-phase expressed 1 [Source:NCBI gene;Acc:425204]
66. CAMK2G ENSGALG00000005088 5037 0.95 - - - - - - - 0.950 - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
67. ACTR3B ENSGALG00000006292 2235 0.949 - - - - - - - 0.949 - - ARP3 actin related protein 3 homolog B, transcript variant X1
68. MMP17 3885 0.949 - - - - - - - 0.949 - - matrix metallopeptidase 17
69. SEMA3C ENSGALG00000040444 5404 0.948 - - - - - - - 0.948 - - semaphorin 3C [Source:NCBI gene;Acc:374090]
70. ST14 ENSGALG00000001331 1655 0.948 - - - - - - - 0.948 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
71. TSPAN5 ENSGALG00000012227 8703 0.944 - - - - - - - 0.944 - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
72. MOB2 ENSGALG00000030499 3658 0.943 - - - - - - - 0.943 - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
73. VDAC2 ENSGALG00000005002 12592 0.94 - - - - - - - 0.940 - - voltage dependent anion channel 2 [Source:NCBI gene;Acc:395498]
74. ABTB1 ENSGALG00000005999 2446 0.94 - - - - - - - 0.940 - - ankyrin repeat and BTB domain containing 1 [Source:NCBI gene;Acc:416026]
75. TADA1L TADA1L 6659 0.94 - - - - - - - 0.940 - -
76. HABP4 ENSGALG00000012628 2894 0.938 - - - - - - - 0.938 - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
77. POLDIP3 ENSGALG00000011863 6424 0.938 - - - - - - - 0.938 - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
78. SECISBP2 ENSGALG00000010694 6990 0.936 - - - - - - - 0.936 - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
79. RBM34 ENSGALG00000029915 5618 0.933 - - - - - - - 0.933 - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
80. CCDC75 CCDC75 4865 0.928 - - - - - - - 0.928 - -
81. DIABLO ENSGALG00000004412 9499 0.926 - - - - - - - 0.926 - - diablo IAP-binding mitochondrial protein, transcript variant X3
82. FAM160B1 ENSGALG00000031404 3153 0.925 - - - - - - - 0.925 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
83. KIAA1551 ENSGALG00000045168 3435 0.923 - - - - - - - 0.923 - - KIAA1551, transcript variant X1
84. MED14 ENSGALG00000016238 4685 0.915 - - - - - - - 0.915 - - mediator complex subunit 14 [Source:HGNC Symbol;Acc:HGNC:2370]
85. SUPT4H1 ENSGALG00000000944 8675 0.914 - - - - - - - 0.914 - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
86. COQ9 ENSGALG00000001184 10174 0.91 - - - - - - - 0.910 - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
87. NKRF ENSGALG00000008645 3531 0.908 - - - - - - - 0.908 - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
88. AP1G1 12403 0.905 - - - - - - - 0.905 - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
89. UBA3 ENSGALG00000013410 6923 0.901 - - - - - - - 0.901 - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
90. CDA ENSGALG00000007382 1544 0.899 - - - - - - - 0.899 - - cytidine deaminase [Source:NCBI gene;Acc:771849]
91. ARMC1 ENSGALG00000036567 5476 0.896 - - - - - - - 0.896 - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
92. MPDZ ENSGALG00000005846 3179 0.894 - - - - - - - 0.894 - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
93. THNSL2 ENSGALG00000015939 2184 0.893 - - - - - - - 0.893 - - threonine synthase like 2 [Source:HGNC Symbol;Acc:HGNC:25602]
94. TLCD1 ENSGALG00000003973 17569 0.893 - - - - - - - 0.893 - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
95. PAXBP1 ENSGALG00000036833 5573 0.89 - - - - - - - 0.890 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
96. TMEM55A 2902 0.889 - - - - - - - 0.889 - - transmembrane protein 55A
97. SMN ENSGALG00000002430 7515 0.884 - - - - - - - 0.884 - - survival of motor neuron [Source:NCBI gene;Acc:374025]
98. DPM2 ENSGALG00000005066 9121 0.872 - - - - - - - 0.872 - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
99. HSD17B12 ENSGALG00000036787 11748 0.871 - - - - - - - 0.871 - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
100. COMMD1 ENSGALG00000008931 12202 0.858 - - - - - - - 0.858 - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA