Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARB2

Gene Name Gene ID Reads Annotation
SCARB2 ENSGALG00000011499 2763 scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]











Genes with expression patterns similar to SCARB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCARB2 ENSGALG00000011499 2763 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
2. NMB ENSGALG00000043506 1387 1.705 - - - - 0.885 - - - - 0.820 neuromedin B [Source:NCBI gene;Acc:415333]
3. KCNB1 ENSGALG00000004758 620 1.633 - - - - 0.877 - - - - 0.756 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
4. CCDC102A ENSGALG00000029999 324 1.61 - - - - 0.888 - - 0.722 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
5. SLC10A7 ENSGALG00000010006 2064 1.565 - - - - 0.812 - - - 0.753 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
6. FLCN ENSGALG00000004816 4101 1.541 - - - - 0.838 - - - 0.703 - folliculin, transcript variant X1
7. NOTCH2 ENSGALG00000002922 3272 1.531 - - - - - - - 0.715 0.816 - notch 2 [Source:NCBI gene;Acc:374031]
8. NR0B1 ENSGALG00000016287 481 1.525 - - - - - - - 0.771 0.754 - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
9. gga-mir-1306 ENSGALG00000025271 1231 1.518 - - - - 0.792 - - - 0.726 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
10. SLC35E2B 7675 1.506 - - - - 0.787 - 0.719 - - - solute carrier family 35 member E2B
11. PTPRJ ENSGALG00000006382 891 1.503 - - - - - - - 0.745 - 0.758 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
12. MCAT ENSGALG00000034275 4598 1.486 - - - - - - 0.706 - - 0.780 malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
13. ZNF618 ENSGALG00000008886 1326 1.471 - - - - 0.761 - - - 0.710 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
14. CCDC6 ENSGALG00000003165 93 0.928 - - - - 0.928 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
15. CSPP1 1756 0.926 - - - - 0.926 - - - - - centrosome and spindle pole associated protein 1
16. STON2 ENSGALG00000010579 76 0.925 - - - - 0.925 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
17. PAQR8 ENSGALG00000016675 85 0.924 - - - - 0.924 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
18. GLT8D1 ENSGALG00000001642 4232 0.923 - - - - 0.923 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
19. ENSGALG00000021024 ENSGALG00000021024 1339 0.922 - - - - - - - - 0.922 -
20. SRSF4 1200 0.92 - - - - 0.920 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
21. CECR1 336 0.917 - - - - 0.917 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
22. ASTE1 ENSGALG00000036171 155 0.917 - - - - 0.917 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
23. MOCS3 ENSGALG00000007986 308 0.917 - - - - 0.917 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
24. NAT9 ENSGALG00000007723 2098 0.913 - - - - 0.913 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
25. RNF126 ENSGALG00000042948 4724 0.912 - - - - 0.912 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
26. FAM171B ENSGALG00000002646 837 0.91 - - - - 0.910 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
27. BBX ENSGALG00000015353 1281 0.908 - - - - 0.908 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
28. GGA.10540 GGA.10540 3324 0.908 - - - - 0.908 - - - - -
29. CLIC3 ENSGALG00000038789 233 0.908 - - - - 0.908 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
30. KCNC4 ENSGALG00000000400 129 0.906 - - - - 0.906 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
31. GPR158 ENSGALG00000007667 111 0.906 - - - - 0.906 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
32. CANT1 ENSGALG00000011822 2218 0.905 - - - - 0.905 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
33. SPSB3 ENSGALG00000002285 1329 0.903 - - - - 0.903 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
34. PPTC7 ENSGALG00000004550 154 0.903 - - - - 0.903 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
35. PPM1M ENSGALG00000033277 556 0.897 - - - - 0.897 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
36. B3GAT2 ENSGALG00000031590 615 0.897 - - - - 0.897 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
37. ENSGALG00000006865 ENSGALG00000006865 307 0.897 - - - - 0.897 - - - - -
38. VPS72 ENSGALG00000000793 329 0.895 - - - - - - - - 0.895 - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
39. TAC1 ENSGALG00000009737 2211 0.894 - - - - 0.894 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
40. CADM3 ENSGALG00000036925 1753 0.893 - - - - 0.893 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
41. ENSGALG00000001591 ENSGALG00000001591 784 0.891 - - - - 0.891 - - - - -
42. CNN2 ENSGALG00000027777 512 0.891 - - - - 0.891 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
43. DUS2 856 0.891 - - - - 0.891 - - - - - dihydrouridine synthase 2, transcript variant X2
44. SCFD1 ENSGALG00000009916 5756 0.89 - - - - 0.890 - - - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
45. ACP6 ENSGALG00000015485 3147 0.888 - - - - 0.888 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
46. RIOK3 ENSGALG00000015004 4249 0.888 - - - - 0.888 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
47. GKAP1 ENSGALG00000012586 2908 0.888 - - - - 0.888 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
48. CMTM3 ENSGALG00000000424 393 0.887 - - - - 0.887 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
49. DPP7 ENSGALG00000038145 4888 0.886 - - - - 0.886 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
50. ABCD2 ENSGALG00000042554 1607 0.883 - - - - 0.883 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
51. PLEKHB1 ENSGALG00000017321 443 0.883 - - - - 0.883 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
52. STX18 ENSGALG00000015012 1489 0.88 - - - - - - - - - 0.880 syntaxin 18 [Source:NCBI gene;Acc:422848]
53. ENSGALG00000022967 ENSGALG00000022967 240 0.879 - - - - 0.879 - - - - -
54. KIFC3 ENSGALG00000043034 802 0.877 - - - - 0.877 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
55. OFD1 ENSGALG00000016576 1916 0.877 - - - - 0.877 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
56. MED18 ENSGALG00000028149 2684 0.876 - - - - 0.876 - - - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
57. CTSB ENSGALG00000030016 177 0.876 - - - - - - - 0.876 - - cathepsin B [Source:NCBI gene;Acc:396329]
58. CAMLG ENSGALG00000006411 662 0.875 - - - - 0.875 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
59. TMEM120A ENSGALG00000001975 2222 0.875 - - - - - - - 0.875 - - transmembrane protein 120A [Source:HGNC Symbol;Acc:HGNC:21697]
60. UTP18 ENSGALG00000002985 7129 0.875 - - - - 0.875 - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
61. KTN1 ENSGALG00000012137 4058 0.873 - - - - - - - - 0.873 - kinectin 1 [Source:NCBI gene;Acc:396335]
62. TEF ENSGALG00000011958 375 0.872 - - - - 0.872 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
63. CCDC88A ENSGALG00000043587 2208 0.871 - - - - 0.871 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
64. OGFOD3 ENSGALG00000001618 2438 0.87 - - - - - - - - 0.870 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
65. KIAA1407 KIAA1407 252 0.87 - - - - 0.870 - - - - -
66. APTX ENSGALG00000001954 692 0.868 - - - - 0.868 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
67. SCAF4 ENSGALG00000033965 2027 0.867 - - - - 0.867 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
68. PRMT10 PRMT10 1169 0.867 - - - - 0.867 - - - - -
69. FAM183A 242 0.866 - - - - 0.866 - - - - - family with sequence similarity 183 member A, transcript variant 2
70. CEP44 ENSGALG00000020201 1060 0.865 - - - - 0.865 - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
71. ENSGALG00000001346 ENSGALG00000001346 233 0.863 - - - - 0.863 - - - - -
72. ENSGALG00000020497 ENSGALG00000020497 446 0.863 - - - - 0.863 - - - - -
73. LRRC6 ENSGALG00000042548 227 0.862 - - - - 0.862 - - - - - leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
74. VRTN ENSGALG00000010232 692 0.861 - - - - 0.861 - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
75. ENSGALG00000028772 ENSGALG00000028772 1636 0.86 - - - - 0.860 - - - - -
76. MED7 ENSGALG00000003870 4244 0.86 - - - - 0.860 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
77. CALCOCO2 ENSGALG00000001525 3121 0.86 - - - - - - - - 0.860 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
78. U2SURP ENSGALG00000002612 4255 0.859 - - - - 0.859 - - - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
79. MIA2 ENSGALG00000010189 1223 0.859 - - - - - - - - 0.859 - melanoma inhibitory activity 2, transcript variant X5
80. SNRNP35 ENSGALG00000003318 1253 0.854 - - - - 0.854 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
81. NEK3 ENSGALG00000017024 696 0.854 - - - - 0.854 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
82. HPS1 ENSGALG00000017419 700 0.854 - - - - - - - 0.854 - - HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 [Source:NCBI gene;Acc:429879]
83. INPP5E ENSGALG00000001964 3580 0.853 - - - - 0.853 - - - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
84. ELOVL1 ENSGALG00000009988 4000 0.853 - - - - 0.853 - - - - - ELOVL fatty acid elongase 1 [Source:NCBI gene;Acc:424564]
85. AASDHPPT ENSGALG00000027981 1017 0.852 - - - - 0.852 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
86. PTX3 ENSGALG00000028284 2984 0.851 - - - - 0.851 - - - - - pentraxin 3 [Source:NCBI gene;Acc:548626]
87. PCNP ENSGALG00000015330 15750 0.85 - - - - 0.850 - - - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
88. AFAP1L2 ENSGALG00000008999 1305 0.85 - - - - 0.850 - - - - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
89. MRGBP ENSGALG00000005531 79 0.85 - - - - - - - - 0.850 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
90. AFG3L2_1 ENSGALG00000013853 1319 0.849 - - - - - - - 0.849 - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
91. SLC35B4 ENSGALG00000038187 320 0.849 - - - - - - - 0.849 - - solute carrier family 35 member B4 [Source:HGNC Symbol;Acc:HGNC:20584]
92. FDX1 ENSGALG00000026507 2573 0.849 - - - - 0.849 - - - - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
93. ZNF385D ENSGALG00000011283 2578 0.845 - - - - 0.845 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
94. NLGN4 NLGN4 283 0.843 - - - - - - - - 0.843 -
95. CDC16 ENSGALG00000016816 2162 0.843 - - - - 0.843 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
96. PLEK2 ENSGALG00000009562 706 0.842 - - - - 0.842 - - - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
97. CAPN5 ENSGALG00000040478 2414 0.841 - - - - 0.841 - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
98. GALNTL4 GALNTL4 3548 0.841 - - - - - - - 0.841 - -
99. HAS2 ENSGALG00000029596 4192 0.841 - - - - - - - - 0.841 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
100. GALNT16 ENSGALG00000009452 675 0.841 - - - - 0.841 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]

There are 385 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA