Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARB1

Gene Name Gene ID Reads Annotation
SCARB1 ENSGALG00000046226 428 scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]











Genes with expression patterns similar to SCARB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCARB1 ENSGALG00000046226 428 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
2. DENND6A ENSGALG00000005656 831 1.567 - - - 0.745 - 0.822 - - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
3. LMCD1 ENSGALG00000008349 928 1.546 - - 0.814 - - - - - - 0.732 LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
4. FGF22 ENSGALG00000041822 37 1.48 - - 0.705 - - 0.775 - - - - fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]
5. CORO7 ENSGALG00000038325 580 1.464 - - - - - 0.718 - - 0.746 - coronin 7 [Source:NCBI gene;Acc:416670]
6. CD200R1A CD200R1A 105 0.919 - - - - - 0.919 - - - -
7. IKBIP ENSGALG00000026284 31 0.918 - - - - - 0.918 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
8. IL1RAP ENSGALG00000007253 6 0.913 - - - - - 0.913 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
9. ENSGALG00000010218 ENSGALG00000010218 12 0.913 - - - - - 0.913 - - - -
10. ETAA1 ENSGALG00000027922 1684 0.91 - - - - - 0.910 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
11. NIPAL3 ENSGALG00000004268 37 0.908 - - - - - 0.908 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
12. LCT ENSGALG00000012260 21 0.903 - - - - - 0.903 - - - - lactase [Source:NCBI gene;Acc:424294]
13. REM1 ENSGALG00000045602 4 0.903 - - - - - 0.903 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
14. C15orf60 C15orf60 16 0.903 - - - - - 0.903 - - - -
15. ASB15 ENSGALG00000008814 7 0.903 - - - - - 0.903 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
16. TRPV6 ENSGALG00000014746 3 0.903 - - - - - 0.903 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
17. SLC51A ENSGALG00000007478 6 0.903 - - - - - 0.903 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
18. LOC396365 ENSGALG00000027219 7 0.903 - - - - - 0.903 - - - - preprogastrin
19. CPSF4L ENSGALG00000004441 4 0.903 - - - - - 0.903 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
20. HSD11B1b ENSGALG00000001369 1 0.903 - - - - - 0.903 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
21. CHRNB3 ENSGALG00000015384 9 0.903 - - - - - 0.903 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
22. ENSGALG00000016499 ENSGALG00000016499 4 0.903 - - - - - 0.903 - - - -
23. TMEM56 ENSGALG00000005580 10 0.903 - - - - - 0.903 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
24. C1QTNF4 ENSGALG00000008080 3 0.903 - - - - - 0.903 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
25. MRAP2 ENSGALG00000015838 7 0.903 - - - - - 0.903 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
26. ENSGALG00000008309 ENSGALG00000008309 7 0.903 - - - - - 0.903 - - - -
27. TGIF2 ENSGALG00000024081 21 0.896 - - - - - 0.896 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
28. PCDH7 ENSGALG00000033883 6 0.896 - - - - - 0.896 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
29. FIBCD1 ENSGALG00000003866 2 0.895 - - - - - 0.895 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
30. ENSGALG00000027143 ENSGALG00000027143 23 0.893 - - - - - 0.893 - - - -
31. LUZP2 ENSGALG00000030151 585 0.89 - - - - - 0.890 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
32. GHR ENSGALG00000014855 131 0.89 - - - - - 0.890 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
33. SGK196 SGK196 83 0.89 - - - - - 0.890 - - - -
34. PSMD4 ENSGALG00000028505 16 0.888 - - - - - 0.888 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
35. C14orf159 C14orf159 7 0.883 - - - - - 0.883 - - - -
36. FASTKD1 ENSGALG00000009841 45 0.881 - - - - - 0.881 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
37. PPARG ENSGALG00000004974 62 0.875 - - - - - 0.875 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
38. CASP7 ENSGALG00000008933 506 0.872 - - - - - 0.872 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
39. C3H20ORF94 C3H20ORF94 414 0.867 - - - - - 0.867 - - - -
40. CCNJL ENSGALG00000040152 4 0.866 - - - - - 0.866 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
41. RUNX3 ENSGALG00000043372 43 0.862 - - - - - 0.862 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
42. C20orf96 C20orf96 10 0.86 - - - - - 0.860 - - - -
43. C15orf26 C15orf26 21 0.857 - - - - - 0.857 - - - -
44. TMEM11 ENSGALG00000004749 206 0.857 - - - - - 0.857 - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
45. TDRD1 ENSGALG00000046180 612 0.849 - - - - - 0.849 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
46. CACNA2D3 ENSGALG00000005400 66 0.844 - - - - - 0.844 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
47. ARF1 ENSGALG00000005393 364 0.843 - - - - - 0.843 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
48. EDEM3 ENSGALG00000004806 205 0.842 - - - - - 0.842 - - - - ER degradation enhancing alpha-mannosidase like protein 3 [Source:HGNC Symbol;Acc:HGNC:16787]
49. PLIN2 ENSGALG00000015090 1290 0.837 - - - - - - - - 0.837 - perilipin 2 [Source:NCBI gene;Acc:427237]
50. GALK2 ENSGALG00000036201 1016 0.837 - - - - - 0.837 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]
51. CHIC2 ENSGALG00000013931 21 0.833 - - - - - 0.833 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
52. SUFU ENSGALG00000008096 307 0.827 - - - - - 0.827 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
53. SRD5A2 ENSGALG00000010625 23 0.822 - - - - - 0.822 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
54. ENSGALG00000023084 ENSGALG00000023084 10 0.818 - - - - - 0.818 - - - -
55. MAP3K8 ENSGALG00000007356 188 0.815 - - - - - 0.815 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
56. UBE2E1 ENSGALG00000011286 5483 0.814 - - - - - 0.814 - - - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
57. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.813 - - - - - 0.813 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
58. FAM65C 36 0.812 - - - - - 0.812 - - - - family with sequence similarity 65 member C, transcript variant X29
59. S100A9 ENSGALG00000024272 103 0.811 - - - - - 0.811 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
60. F8 ENSGALG00000005077 56 0.809 - - - - - 0.809 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
61. NHLRC2 ENSGALG00000008946 387 0.806 - - - - - 0.806 - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
62. PROC ENSGALG00000001780 26 0.804 - - - 0.804 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
63. AIM1 51 0.803 - - - 0.803 - - - - - - absent in melanoma 1, transcript variant X2
64. ENSGALG00000010336 ENSGALG00000010336 16 0.8 - - - 0.800 - - - - - -
65. PLXDC2 ENSGALG00000007956 238 0.799 - - - - - 0.799 - - - - plexin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21013]
66. C8B ENSGALG00000010853 21 0.798 - - - 0.798 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
67. MMR1L3 ENSGALG00000008638 26 0.798 - - - 0.798 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
68. BFIV21 BFIV21 30 0.797 - - - 0.797 - - - - - -
69. TMC7 ENSGALG00000006889 125 0.796 - - - 0.796 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
70. TRMT12 ENSGALG00000006773 707 0.794 - - - - - 0.794 - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
71. FER ENSGALG00000000273 80 0.791 - - - - - 0.791 - - - - FER tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3655]
72. RYR2 ENSGALG00000010812 95 0.79 - - - 0.790 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
73. RFX3 ENSGALG00000010179 305 0.79 - - - - - 0.790 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
74. KIAA0100 ENSGALG00000003766 914 0.789 - - - - - - - 0.789 - - KIAA0100 [Source:HGNC Symbol;Acc:HGNC:28960]
75. GRIN2A ENSGALG00000007278 17 0.789 - - - 0.789 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
76. CUBN ENSGALG00000008704 21 0.789 - - - 0.789 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
77. SPG11 ENSGALG00000008180 1890 0.788 - - - 0.788 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
78. SHB ENSGALG00000026811 1194 0.788 - - - - - 0.788 - - - - SH2 domain containing adaptor protein B
79. NME6 ENSGALG00000038044 1231 0.787 - - - - - - - - 0.787 - NME/NM23 nucleoside diphosphate kinase 6
80. CFAP74 ENSGALG00000001288 54 0.786 - - - 0.786 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
81. NTN4 ENSGALG00000011406 72 0.786 - - - 0.786 - - - - - - netrin 4 [Source:HGNC Symbol;Acc:HGNC:13658]
82. KIAA0319L ENSGALG00000002445 75 0.785 - - - 0.785 - - - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
83. SKIV2L ENSGALG00000035499 45 0.783 - - - - - 0.783 - - - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
84. UBE2A ENSGALG00000008648 174 0.783 - - - 0.783 - - - - - - ubiquitin conjugating enzyme E2 A [Source:NCBI gene;Acc:395672]
85. RAF1 ENSGALG00000004998 327 0.782 - - - 0.782 - - - - - - Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
86. PALMD ENSGALG00000005442 901 0.782 - - - - - - - - - 0.782 palmdelphin [Source:NCBI gene;Acc:424475]
87. SLC15A5 ENSGALG00000013097 213 0.779 - - - - - - - - - 0.779 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
88. EPB41L4A ENSGALG00000000234 113 0.779 - - - 0.779 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
89. ZMYM4 ENSGALG00000002499 435 0.775 - - - 0.775 - - - - - - zinc finger MYM-type containing 4, transcript variant X1
90. CCM2 ENSGALG00000005612 323 0.775 - - 0.775 - - - - - - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
91. FGF3 ENSGALG00000026853 89 0.774 - - - 0.774 - - - - - - fibroblast growth factor 3 [Source:NCBI gene;Acc:396267]
92. ARNTL ENSGALG00000005378 19 0.774 - - - - - 0.774 - - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
93. KLHL22 ENSGALG00000006422 132 0.774 - - - - - 0.774 - - - - kelch like family member 22, transcript variant X2
94. ADAP2 ENSGALG00000003319 134 0.773 - - - 0.773 - - - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
95. RPLP1 ENSGALG00000030878 445592 0.773 - - - 0.773 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
96. LCAT ENSGALG00000028928 484 0.772 - - - - - 0.772 - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
97. NMT2 ENSGALG00000008791 542 0.769 - - - - - - - - 0.769 - N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]
98. ATXN3 ENSGALG00000010766 48 0.767 - - - 0.767 - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
99. KIF1B ENSGALG00000002726 461 0.766 - - - 0.766 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
100. ANKRD28 ENSGALG00000011226 160 0.765 - - - 0.765 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA