Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCARA5

Gene Name Gene ID Reads Annotation
SCARA5 ENSGALG00000016580 712 scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]











Genes with expression patterns similar to SCARA5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCARA5 ENSGALG00000016580 712 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
2. COL8A1 ENSGALG00000015253 2505 2.584 - - - - - 0.947 0.787 0.850 - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
3. TIMP3 ENSGALG00000028627 8706 2.278 - - - - - 0.826 0.726 0.726 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
4. OSF-2 OSF-2 10433 2.258 - - - - - 0.818 0.728 0.712 - -
5. EMILIN3 ENSGALG00000030012 6200 1.685 - - - - - 0.911 0.774 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
6. COL9A2 ENSGALG00000027526 4685 1.679 - - - - - 0.962 0.717 - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
7. SCARA3 ENSGALG00000026651 2559 1.678 - - - - - 0.918 0.760 - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
8. SPON2 ENSGALG00000038433 1240 1.662 - - - - - 0.925 - 0.737 - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
9. SAMD3 ENSGALG00000032409 459 1.657 - - - - - 0.933 - 0.724 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
10. OCA2 ENSGALG00000016740 421 1.652 - - - - - 0.926 - 0.726 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
11. COL9A1 ENSGALG00000015970 3788 1.645 - - - - - 0.898 0.747 - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
12. PCDH17 ENSGALG00000016941 1006 1.594 - - - - - 0.892 0.702 - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
13. COL9A3 ENSGALG00000005628 2842 1.564 - - - - - 0.758 - 0.806 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
14. WWP2 ENSGALG00000000699 5040 1.516 - - - - - 0.814 0.702 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
15. SLC24A4 ENSGALG00000010793 238 1.477 - - - - - 0.723 0.754 - - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
16. LECT1 LECT1 12694 1.46 - - - - - - 0.760 0.700 - -
17. LEFTY2 ENSGALG00000009256 1 0.953 - - - - - 0.953 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
18. PTH3R PTH3R 214 0.953 - - - - - 0.953 - - - -
19. ENSGALG00000008822 ENSGALG00000008822 221 0.949 - - - - - 0.949 - - - -
20. SLC15A5 ENSGALG00000013097 213 0.948 - - - - - 0.948 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
21. RAB38 ENSGALG00000028018 1046 0.946 - - - - - 0.946 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
22. CCK ENSGALG00000029788 213 0.944 - - - - - 0.944 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
23. HOXA10 ENSGALG00000026631 1 0.933 - - - - - 0.933 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
24. KCNG1 ENSGALG00000007980 26 0.933 - - - - - 0.933 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
25. APOD ENSGALG00000006995 2 0.933 - - - - - 0.933 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
26. WIF1 ENSGALG00000039209 863 0.915 - - - - - 0.915 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
27. SST ENSGALG00000007361 1383 0.912 - - - - - 0.912 - - - - somatostatin [Source:NCBI gene;Acc:396279]
28. RRAD ENSGALG00000005140 183 0.912 - - - - - 0.912 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
29. ZNF385B ENSGALG00000009012 290 0.901 - - - - - 0.901 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
30. CHRDL1 ENSGALG00000008072 711 0.892 - - - - - 0.892 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
31. T ENSGALG00000011489 2619 0.891 - - - - - 0.891 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
32. NPY7R ENSGALG00000021303 215 0.884 - - - - - 0.884 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
33. MYL1 ENSGALG00000002907 1300 0.875 - - - - - 0.875 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
34. LOC428824 ENSGALG00000004393 358 0.864 - - - - - 0.864 - - - - SITS-binding protein-like, transcript variant X1
35. TAC1 ENSGALG00000009737 2211 0.863 - - - - - 0.863 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
36. B3GNT7 ENSGALG00000007701 929 0.855 - - - - - 0.855 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
37. FAM160A2 ENSGALG00000003416 23 0.836 - - - - - 0.836 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
38. C1H7ORF60 C1H7ORF60 3 0.836 - - - - - 0.836 - - - -
39. PITPNC1L ENSGALG00000002610 3 0.836 - - - - - 0.836 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
40. MFSD6 ENSGALG00000041884 1 0.836 - - - - - 0.836 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
41. ENSGALG00000013079 ENSGALG00000013079 12 0.836 - - - - - 0.836 - - - -
42. PRKG2 ENSGALG00000010909 1 0.836 - - - - - 0.836 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
43. SEC16A ENSGALG00000002364 19 0.836 - - - - - 0.836 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
44. RHBDF2 ENSGALG00000001943 1 0.836 - - - - - 0.836 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
45. TMEM163 ENSGALG00000012190 72 0.836 - - - - - 0.836 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
46. PTPN3 ENSGALG00000022909 6 0.836 - - - - - 0.836 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
47. GBE ENSGALG00000011859, ENSGALG00000028016 2 0.836 - - - - - 0.836 - - - - eye-globin, transcript variant X3
48. AFTPH ENSGALG00000008828 21 0.836 - - - - - 0.836 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
49. SNX8 ENSGALG00000004255 4 0.836 - - - - - 0.836 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
50. F-KER ENSGALG00000028706 0 0.836 - - - - - 0.836 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
51. PPP1R12B ENSGALG00000000336 16 0.836 - - - - - 0.836 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
52. ARHGEF17 6 0.836 - - - - - 0.836 - - - - Rho guanine nucleotide exchange factor 17
53. PPP1R1B ENSGALG00000044406 6 0.836 - - - - - 0.836 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
54. VSTM2A ENSGALG00000041764 2 0.836 - - - - - 0.836 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
55. ZNRF2 ENSGALG00000031163 0 0.836 - - - - - 0.836 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
56. PLD5 ENSGALG00000010737 5 0.836 - - - - - 0.836 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
57. STX3 ENSGALG00000035153 1 0.836 - - - - - 0.836 - - - - syntaxin 3
58. ENSGALG00000021682 ENSGALG00000021682 0 0.836 - - - - - 0.836 - - - -
59. PSTPIP1 ENSGALG00000002786 9 0.836 - - - - - 0.836 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
60. CARF ENSGALG00000008474 6 0.836 - - - - - 0.836 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
61. SP-A SP-A 9 0.836 - - - - - 0.836 - - - -
62. DNMBP ENSGALG00000007304 4 0.836 - - - - - 0.836 - - - - dynamin binding protein
63. VPS37D 3 0.836 - - - - - 0.836 - - - - VPS37D, ESCRT-I subunit
64. MINPP1 ENSGALG00000003695 1 0.836 - - - - - 0.836 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
65. CBL ENSGALG00000029077 6 0.836 - - - - - 0.836 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
66. GTF3C3 ENSGALG00000007958 6 0.836 - - - - - 0.836 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
67. CORO6 ENSGALG00000028949 21 0.836 - - - - - 0.836 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
68. MAGI1 ENSGALG00000007431 23 0.836 - - - - - 0.836 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
69. RPS6KA2 ENSGALG00000011473 2 0.836 - - - - - 0.836 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
70. BAFF BAFF 40 0.836 - - - - - 0.836 - - - -
71. HID1 ENSGALG00000007808 2 0.836 - - - - - 0.836 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
72. FARP2 ENSGALG00000005788 6 0.836 - - - - - 0.836 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
73. ENSGALG00000028116 ENSGALG00000028116 0 0.836 - - - - - 0.836 - - - -
74. SNORA24 SNORA24 2 0.836 - - - - - 0.836 - - - -
75. AGRP ENSGALG00000002244 27 0.836 - - - - - 0.836 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
76. ENSGALG00000013409 ENSGALG00000013409 4 0.836 - - - - - 0.836 - - - -
77. DSCAML1 ENSGALG00000007314 1 0.836 - - - - - 0.836 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
78. LPP ENSGALG00000007337 18 0.836 - - - - - 0.836 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
79. OVST_1 ENSGALG00000011930 9 0.836 - - - - - 0.836 - - - - ovostatin [Source:NCBI gene;Acc:396151]
80. gga-mir-301a ENSGALG00000029989 5 0.836 - - - - - 0.836 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
81. ENPP4 ENSGALG00000016708 18 0.836 - - - - - 0.836 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
82. MAVS ENSGALG00000040428 1 0.836 - - - - - 0.836 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
83. TBX15 0 0.836 - - - - - 0.836 - - - - T-box 15
84. MFSD11 ENSGALG00000001777 8 0.836 - - - - - 0.836 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
85. SLC26A6 ENSGALG00000026089 3 0.836 - - - - - 0.836 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
86. AATK ENSGALG00000006901 1 0.836 - - - - - 0.836 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
87. ERI3 ENSGALG00000010106 995 0.836 - - - - - 0.836 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
88. TRIM25 ENSGALG00000003144 12 0.836 - - - - - 0.836 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
89. C17orf105 C17orf105 11 0.836 - - - - - 0.836 - - - -
90. SOD3 ENSGALG00000018557 16 0.836 - - - - - 0.836 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
91. FKHR FKHR 1 0.836 - - - - - 0.836 - - - -
92. GAMT ENSGALG00000040182 5 0.836 - - - - - 0.836 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
93. gga-mir-10a ENSGALG00000021952 4 0.836 - - - - - 0.836 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
94. PABPN1L ENSGALG00000006242 3 0.836 - - - - - 0.836 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
95. WFDC2 ENSGALG00000031164 37 0.836 - - - - - 0.836 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
96. RNF217 ENSGALG00000013651 1 0.836 - - - - - 0.836 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
97. WDR41 ENSGALG00000004350 16 0.836 - - - - - 0.836 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
98. TMEM189 ENSGALG00000026906 14 0.836 - - - - - 0.836 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
99. NME4 ENSGALG00000002688 1 0.836 - - - - - 0.836 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
100. LDB1 ENSGALG00000007641 2 0.836 - - - - - 0.836 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA