Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCAPER

Gene Name Gene ID Reads Annotation
SCAPER ENSGALG00000002883 2087 S-phase cyclin A associated protein in the ER [Source:HGNC Symbol;Acc:HGNC:13081]











Genes with expression patterns similar to SCAPER

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCAPER ENSGALG00000002883 2087 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 S-phase cyclin A associated protein in the ER [Source:HGNC Symbol;Acc:HGNC:13081]
2. ADRM1 ENSGALG00000005200 5417 1.554 - - - - - - 0.817 0.737 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
3. IARS ENSGALG00000004813 12936 1.474 - - - - - - 0.770 0.704 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
4. FANCL ENSGALG00000030022 7423 0.807 - - - - - - 0.807 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
5. CHTF8 ENSGALG00000000632 7230 0.8 - - - - - - 0.800 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
6. CHCHD6 ENSGALG00000006056 6121 0.798 - - - - - - 0.798 - - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
7. THAP9 ENSGALG00000044141 1993 0.796 - - - - - - - 0.796 - - THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
8. ZNF830 ENSGALG00000013156 3896 0.792 - - - - - - - 0.792 - - zinc finger protein 830
9. USP46 ENSGALG00000037496 562 0.788 - - - - - - - 0.788 - - ubiquitin specific peptidase 46 [Source:HGNC Symbol;Acc:HGNC:20075]
10. MSRB1 ENSGALG00000005414 4197 0.788 - - - - - - 0.788 - - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
11. MTHFR ENSGALG00000004612 2299 0.786 - - - - - - 0.786 - - - Gallus gallus methylenetetrahydrofolate reductase (MTHFR), mRNA. [Source:RefSeq mRNA;Acc:NM_001328491]
12. VPS41 ENSGALG00000031635 4391 0.781 - - - - - - - 0.781 - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
13. HDDC2 ENSGALG00000014841 7674 0.78 - - - - - - 0.780 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
14. WDFY1 ENSGALG00000005158 2512 0.779 - - - - - - 0.779 - - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
15. MDN1 ENSGALG00000015733 2352 0.779 - - - - - - - 0.779 - - midasin AAA ATPase 1, transcript variant X1
16. RBBP8 ENSGALG00000014982 3255 0.779 - - - - - - 0.779 - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
17. C14orf80 C14orf80 1921 0.778 - - - - - - - 0.778 - -
18. RPS17 ENSGALG00000002157 142120 0.775 - - - - - - 0.775 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
19. CBLL1 ENSGALG00000038981 6725 0.775 - - - - - - 0.775 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
20. TK2 ENSGALG00000034216 5394 0.773 - - - - - - 0.773 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
21. SETD3 ENSGALG00000034802 4125 0.772 - - - - - - - 0.772 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
22. UBE2V1 ENSGALG00000008015 17947 0.768 - - - - - - 0.768 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
23. LLPH ENSGALG00000019358 20976 0.767 - - - - - - 0.767 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
24. CRLF3 ENSGALG00000003284 6002 0.767 - - - - - - 0.767 - - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
25. KIAA0020 KIAA0020 14353 0.765 - - - - - - 0.765 - - -
26. SPDL1 ENSGALG00000001942 4403 0.764 - - - - - - 0.764 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
27. DYNC1I2 ENSGALG00000009551 5420 0.763 - - - - - - - 0.763 - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
28. DDX27 ENSGALG00000006974 18388 0.76 - - - - - - 0.760 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
29. ARL14EP ENSGALG00000012139 4690 0.76 - - - - - - - 0.760 - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
30. SMC4 ENSGALG00000009553 15715 0.758 - - - - - - 0.758 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
31. CHM ENSGALG00000006906 4953 0.757 - - - - - - - 0.757 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
32. MRPL50 ENSGALG00000015543 11649 0.756 - - - - - - 0.756 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
33. CLNS1A ENSGALG00000008574 25675 0.755 - - - - - - 0.755 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
34. EGLN1 ENSGALG00000041422 11032 0.755 - - - - - - 0.755 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
35. SDHD ENSGALG00000007878 25129 0.754 - - - - - - 0.754 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
36. ENSGALG00000010034 ENSGALG00000010034 3293 0.753 - - - - - - 0.753 - - -
37. TPR ENSGALG00000005105 2924 0.752 - - - - - - - 0.752 - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
38. TAF2 ENSGALG00000043193 6311 0.752 - - - - - - 0.752 - - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
39. COMMD10 ENSGALG00000002308 7442 0.752 - - - - - - 0.752 - - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
40. KIF2C ENSGALG00000010120 8999 0.75 - - - - - - 0.750 - - - kinesin family member 2C, transcript variant X1
41. WIPI2 ENSGALG00000004557 4961 0.747 - - - - - - - 0.747 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
42. TTYH2 ENSGALG00000026940 15628 0.747 - - - - - - 0.747 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
43. PGAM5 ENSGALG00000002137 7700 0.746 - - - - - - 0.746 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
44. SPINZ SPINZ 10341 0.745 - - - - - - 0.745 - - -
45. CUL3 ENSGALG00000005108 9571 0.744 - - - - - - 0.744 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
46. RPS28 ENSGALG00000024398 244056 0.743 - - - - - - 0.743 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
47. PFKFB3 ENSGALG00000040369 2119 0.743 - - - - - - 0.743 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:HGNC Symbol;Acc:HGNC:8874]
48. XBP1 ENSGALG00000005796 14007 0.743 - - - - - - - 0.743 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
49. CLTCL1 ENSGALG00000041760 9351 0.743 - - - - - - 0.743 - - - clathrin, heavy chain-like 1, transcript variant X6
50. ENSGALG00000005870 ENSGALG00000005870 4343 0.741 - - - - - - - 0.741 - -
51. NDUFAF2 ENSGALG00000027564 7302 0.741 - - - - - - 0.741 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
52. EXOSC9 ENSGALG00000011884 3403 0.741 - - - - - - 0.741 - - - exosome component 9 [Source:NCBI gene;Acc:619530]
53. PPP2R2A ENSGALG00000000235 4263 0.741 - - - - - - 0.741 - - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
54. RABGGTB ENSGALG00000011388 11654 0.741 - - - - - - 0.741 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
55. HSF2 ENSGALG00000038420 5259 0.74 - - - - - - - 0.740 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
56. PHYH ENSGALG00000035636 1535 0.74 - - - - - - - 0.740 - - phytanoyl-CoA 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:8940]
57. PSMD3 ENSGALG00000033162 25615 0.74 - - - - - - 0.740 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
58. RAB18 ENSGALG00000007435 3589 0.739 - - - - - - - 0.739 - - RAB18, member RAS oncogene family [Source:NCBI gene;Acc:420483]
59. DLG5 ENSGALG00000043018 2357 0.737 - - - - - - - 0.737 - - discs large MAGUK scaffold protein 5 [Source:HGNC Symbol;Acc:HGNC:2904]
60. DRG1 ENSGALG00000006921 10791 0.737 - - - - - - 0.737 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
61. BIRC6 ENSGALG00000010541 7999 0.735 - - - - - - 0.735 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
62. NUP50 ENSGALG00000014222 11743 0.735 - - - - - - 0.735 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
63. DSCR3 3583 0.735 - - - - - - - 0.735 - - DSCR3 arrestin fold containing, transcript variant X1
64. GRPEL1 ENSGALG00000015549 11246 0.734 - - - - - - 0.734 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
65. ABHD12 ENSGALG00000008525 5763 0.734 - - - - - - 0.734 - - - abhydrolase domain containing 12 [Source:NCBI gene;Acc:421249]
66. CTNNBL1 ENSGALG00000006817 6765 0.734 - - - - - - - 0.734 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
67. MRPL20 ENSGALG00000001542 28764 0.734 - - - - - - 0.734 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
68. CCND1 ENSGALG00000007555 6715 0.734 - - - - - - - 0.734 - - cyclin D1 [Source:NCBI gene;Acc:396341]
69. ENY2 ENSGALG00000036618 30314 0.734 - - - - - - 0.734 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
70. HEATR3 ENSGALG00000041613 2704 0.734 - - - - - - - 0.734 - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
71. GOLGA7 ENSGALG00000003483 26525 0.733 - - - - - - 0.733 - - - golgin A7 [Source:NCBI gene;Acc:426787]
72. SCRN1 ENSGALG00000011176 3783 0.731 - - - - - - - 0.731 - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
73. SRM ENSGALG00000003039 8331 0.73 - - - - - - 0.730 - - - spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
74. MSH6 ENSGALG00000008957 6396 0.729 - - - - - - - 0.729 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
75. ZNF593 ENSGALG00000000542 79105 0.729 - - - - - - 0.729 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
76. EBNA1BP2 ENSGALG00000009045 17453 0.729 - - - - - - 0.729 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
77. DHX8 ENSGALG00000032305 2571 0.729 - - - - - - 0.729 - - - DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
78. METTL14 ENSGALG00000012000 5876 0.728 - - - - - - 0.728 - - - methyltransferase like 14 [Source:NCBI gene;Acc:422684]
79. TRAPPC6B ENSGALG00000010157 7567 0.728 - - - - - - 0.728 - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
80. EIF2S1 ENSGALG00000009565 63906 0.728 - - - - - - 0.728 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
81. TOR1A ENSGALG00000004165 4487 0.728 - - - - - - 0.728 - - - torsin family 1 member A [Source:NCBI gene;Acc:417190]
82. WDR43 ENSGALG00000032529 12235 0.728 - - - - - - 0.728 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
83. SRBD1 ENSGALG00000009990 4568 0.727 - - - - - - - 0.727 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
84. DMTF1 ENSGALG00000030844 3584 0.727 - - - - - - 0.727 - - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
85. DGCR6 ENSGALG00000027369 7882 0.727 - - - - - - 0.727 - - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
86. C26H6ORF130 C26H6ORF130 2434 0.726 - - - - - - - 0.726 - -
87. DKC1 ENSGALG00000005054 30350 0.726 - - - - - - 0.726 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
88. HOXB13 ENSGALG00000033154 71 0.725 - - - - - 0.725 - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
89. EBAG9 ENSGALG00000036293 10058 0.725 - - - - - - - 0.725 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
90. YRDC ENSGALG00000029001 6529 0.725 - - - - - - 0.725 - - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
91. DLG3 ENSGALG00000041900 3016 0.724 - - - - - - 0.724 - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
92. RPF2 ENSGALG00000037087 12788 0.724 - - - - - - 0.724 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
93. MRPL39 ENSGALG00000015742 7025 0.724 - - - - - - 0.724 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
94. SLC35E3 ENSGALG00000009940 8560 0.722 - - - - - - 0.722 - - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
95. FCF1 ENSGALG00000010275 24928 0.722 - - - - - - 0.722 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
96. THAP5 ENSGALG00000009494 6540 0.722 - - - - - - 0.722 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
97. ADD1 ENSGALG00000015664 6828 0.722 - - - - - - 0.722 - - - adducin 1 [Source:NCBI gene;Acc:422882]
98. NOP14 ENSGALG00000015649 7039 0.721 - - - - - - 0.721 - - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
99. ZMYM2 ENSGALG00000017139 3747 0.721 - - - - - - - 0.721 - - zinc finger MYM-type containing 2, transcript variant X10
100. NUP85 ENSGALG00000007974 21249 0.719 - - - - - - 0.719 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]

There are 86 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA