Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SCAF8

Gene Name Gene ID Reads Annotation
SCAF8 ENSGALG00000013635 421 SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]











Genes with expression patterns similar to SCAF8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCAF8 ENSGALG00000013635 421 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
2. CLSPN ENSGALG00000002346 2590 1.637 - - - - - 0.815 - - 0.822 - claspin [Source:NCBI gene;Acc:428223]
3. RNF38 ENSGALG00000015311 506 1.553 - - - - - 0.792 - 0.761 - - ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052]
4. FGF7 ENSGALG00000028158 189 1.545 - - - - - 0.841 - - 0.704 - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
5. TMEM209 ENSGALG00000008036 1190 1.516 - - - - - 0.740 - - 0.776 - transmembrane protein 209 [Source:HGNC Symbol;Acc:HGNC:21898]
6. KIF7 ENSGALG00000006611 33 0.987 - - - - - 0.987 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
7. SH2D1B ENSGALG00000028448 17 0.987 - - - - - 0.987 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
8. OLFML1 ENSGALG00000027184 19 0.987 - - - - - 0.987 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
9. BLVRA ENSGALG00000031786 23 0.986 - - - - - 0.986 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
10. GPD1L2 ENSGALG00000012061 31 0.986 - - - - - 0.986 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
11. HJURP ENSGALG00000015363 54 0.985 - - - - - 0.985 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
12. AQP1 ENSGALG00000005209 111 0.984 - - - - - 0.984 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
13. LTC4SL ENSGALG00000011450 645 0.983 - - - - - 0.983 - - - - leukotriene C4 synthase-like, transcript variant X3
14. DRD4 ENSGALG00000040761 79 0.983 - - - - - 0.983 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
15. ADNP2 ENSGALG00000035669 318 0.981 - - - - - 0.981 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
16. RAC3 ENSGALG00000040606 355 0.98 - - - - - 0.980 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
17. CLASP1 ENSGALG00000011645 1378 0.979 - - - - - 0.979 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
18. NIPAL4 ENSGALG00000039687 29 0.979 - - - - - 0.979 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
19. ENSGALG00000002946 ENSGALG00000002946 56 0.978 - - - - - 0.978 - - - -
20. LOC419851 ENSGALG00000023953 80 0.977 - - - - - 0.977 - - - - complement component 4 binding protein, alpha chain
21. C1orf168 C1orf168 98 0.977 - - - - - 0.977 - - - -
22. ELMSAN1 ENSGALG00000009282 79 0.974 - - - - - 0.974 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
23. GOLGA1 ENSGALG00000001025 334 0.974 - - - - - 0.974 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
24. MCC ENSGALG00000000208 61 0.97 - - - - - 0.970 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
25. KLHL40 ENSGALG00000005292 61 0.97 - - - - - 0.970 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
26. SMOC2 ENSGALG00000011205 340 0.97 - - - - - 0.970 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
27. PACSIN2 ENSGALG00000014159 601 0.97 - - - - - 0.970 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
28. DSEL ENSGALG00000042505 92 0.967 - - - - - 0.967 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
29. GTF3C4 ENSGALG00000031016 1221 0.966 - - - - - 0.966 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
30. COBL ENSGALG00000013102 84 0.966 - - - - - 0.966 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
31. PON2 ENSGALG00000009689 1416 0.957 - - - - - 0.957 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
32. WHAMM ENSGALG00000006002 1678 0.953 - - - - - 0.953 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
33. POLB ENSGALG00000040828 7462 0.953 - - - - - 0.953 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
34. SERPINB1 ENSGALG00000019555 29 0.952 - - - - - 0.952 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
35. ENSGALG00000026461 ENSGALG00000026461 61 0.949 - - - - - 0.949 - - - -
36. JAKMIP2 ENSGALG00000007593 95 0.949 - - - - - 0.949 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
37. TERF1 ENSGALG00000037453 4497 0.949 - - - - - 0.949 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
38. SERPINF2 ENSGALG00000002987 236 0.947 - - - - - 0.947 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
39. C9orf96 C9orf96 43 0.944 - - - - - 0.944 - - - -
40. TPCN3 ENSGALG00000008198 124 0.942 - - - - - 0.942 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
41. ABCC3 ENSGALG00000007522 340 0.941 - - - - - 0.941 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
42. ACN9 ACN9 269 0.939 - - - - - 0.939 - - - -
43. GYPC ENSGALG00000011566 99 0.939 - - - - - 0.939 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
44. SPSB3 ENSGALG00000002285 1329 0.938 - - - - - 0.938 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
45. TTC7A ENSGALG00000010020 793 0.938 - - - - - 0.938 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
46. DIAPH3 ENSGALG00000016937 1069 0.937 - - - - - 0.937 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
47. EVC2 ENSGALG00000015029 51 0.935 - - - - - 0.935 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
48. FGD4 ENSGALG00000012932 50 0.934 - - - - - 0.934 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
49. MTR ENSGALG00000014464 90 0.932 - - - - - - - - 0.932 - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
50. DBT ENSGALG00000005280 2893 0.931 - - - - - 0.931 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
51. CDC14A ENSGALG00000005248 502 0.93 - - - - - 0.930 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
52. MXRA5 ENSGALG00000016635 352 0.93 - - - - - 0.930 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
53. PRKDC ENSGALG00000042469 449 0.928 - - - - - 0.928 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
54. PNPLA4 ENSGALG00000016618 142 0.927 - - - - - 0.927 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
55. PRUNE PRUNE 452 0.926 - - - - - 0.926 - - - -
56. LOC415478 ENSGALG00000021171 100 0.923 - - - - - 0.923 - - - - transmembrane protein 2-like, transcript variant X2
57. CRCP ENSGALG00000002587 8809 0.923 - - - - - 0.923 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
58. APLF ENSGALG00000008745 887 0.92 - - - - - 0.920 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
59. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.919 - - - - - 0.919 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
60. ORMDL3 ENSGALG00000029142 165 0.916 - - - - - 0.916 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
61. WARS ENSGALG00000011228 193 0.916 - - - - - 0.916 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
62. PCSK5 ENSGALG00000033256 674 0.913 - - - - - 0.913 - - - - proprotein convertase subtilisin/kexin type 5 [Source:HGNC Symbol;Acc:HGNC:8747]
63. GCHFR ENSGALG00000032239 1608 0.912 - - - - - 0.912 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
64. FAM177A1 ENSGALG00000010046 4318 0.911 - - - - - 0.911 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
65. ATG10 ENSGALG00000027714 1100 0.911 - - - - - 0.911 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
66. BRAT1 ENSGALG00000004348 158 0.908 - - - - - 0.908 - - - - BRCA1 associated ATM activator 1, transcript variant X3
67. CELF1 ENSGALG00000008097 4717 0.907 - - - - - 0.907 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
68. CARKD CARKD 2914 0.906 - - - - - 0.906 - - - -
69. LEMD3 ENSGALG00000009873 347 0.906 - - - - - 0.906 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
70. EIF2AK4 ENSGALG00000009611 2164 0.905 - - - - - 0.905 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
71. ASAP2 ENSGALG00000016419 1393 0.905 - - - - - 0.905 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
72. SLC3A1 ENSGALG00000009973 608 0.903 - - - - - 0.903 - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
73. VRK2 ENSGALG00000032770 117 0.903 - - - - - 0.903 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
74. CBX8 ENSGALG00000026548 1063 0.901 - - - - - 0.901 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
75. DSL1 DSL1 113 0.901 - - - - - 0.901 - - - -
76. BET1 ENSGALG00000024485 2451 0.899 - - - - - 0.899 - - - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
77. ENSGALG00000014545 ENSGALG00000014545 285 0.899 - - - - - 0.899 - - - -
78. ASCC3 ENSGALG00000015465 259 0.898 - - - - - 0.898 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
79. E4F1 ENSGALG00000005900 1814 0.898 - - - - - 0.898 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
80. SLC9A9 ENSGALG00000002374 179 0.898 - - - - - 0.898 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
81. C19H17ORF85 C19H17ORF85 2538 0.897 - - - - - 0.897 - - - -
82. XPC ENSGALG00000006357 2484 0.896 - - - - - 0.896 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
83. LRRC57 ENSGALG00000009112 1443 0.895 - - - - - 0.895 - - - - leucine rich repeat containing 57 [Source:NCBI gene;Acc:423236]
84. ENSGALG00000004127 ENSGALG00000004127 566 0.895 - - - - - 0.895 - - - -
85. PRKAR1A ENSGALG00000004237 4785 0.893 - - - - - 0.893 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
86. BYSL ENSGALG00000003467 7555 0.89 - - - - - 0.890 - - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
87. GDE1 ENSGALG00000006916 1040 0.888 - - - - - 0.888 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
88. POT1 ENSGALG00000008740 947 0.886 - - - - - 0.886 - - - - protection of telomeres 1 [Source:NCBI gene;Acc:404538]
89. FKBP1B ENSGALG00000016500 117 0.884 - - - - - 0.884 - - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
90. HIBADH ENSGALG00000033207 3540 0.882 - - - - - 0.882 - - - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
91. WDR59 ENSGALG00000002798 815 0.881 - - - - - 0.881 - - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
92. CHST13 ENSGALG00000029632 391 0.881 - - - - - 0.881 - - - - carbohydrate sulfotransferase 13 [Source:HGNC Symbol;Acc:HGNC:21755]
93. NAIF1 ENSGALG00000027734 1551 0.881 - - - - - 0.881 - - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
94. MLF1 ENSGALG00000009654 619 0.879 - - - - - 0.879 - - - - myeloid leukemia factor 1, transcript variant X3
95. CADPS2 ENSGALG00000008926 398 0.878 - - - - - 0.878 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
96. RBMX ENSGALG00000006457 34009 0.876 - - - - - 0.876 - - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
97. DDI2 115 0.876 - - - - - 0.876 - - - - DNA damage inducible 1 homolog 2, transcript variant X2
98. MGAT4B ENSGALG00000005924 2663 0.876 - - - - - 0.876 - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
99. UBA6 ENSGALG00000011762 753 0.874 - - - - - 0.874 - - - - ubiquitin like modifier activating enzyme 6 [Source:HGNC Symbol;Acc:HGNC:25581]
100. DDX59 ENSGALG00000002164 3314 0.874 - - - - - 0.874 - - - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]

There are 211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA