Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCAF4

Gene Name Gene ID Reads Annotation
SCAF4 ENSGALG00000033965 2027 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]











Genes with expression patterns similar to SCAF4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCAF4 ENSGALG00000033965 2027 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
2. FAM183A 242 1.827 - - - - 0.875 - 0.952 - - - family with sequence similarity 183 member A, transcript variant 2
3. PIK3R3 ENSGALG00000010335 374 1.783 - - - - - - 0.948 - - 0.835 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
4. NAT9 ENSGALG00000007723 2098 1.778 - - - - 0.899 - 0.879 - - - N-acetyltransferase 9 (putative), transcript variant X7
5. RNF126 ENSGALG00000042948 4724 1.735 - - - - 0.886 - - - - 0.849 ring finger protein 126 [Source:NCBI gene;Acc:420085]
6. CANX ENSGALG00000032148 11297 1.69 - - - - 0.790 - 0.900 - - - calnexin [Source:NCBI gene;Acc:416288]
7. NEK3 ENSGALG00000017024 696 1.674 - - - - 0.866 - - - - 0.808 NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
8. ORC4 ENSGALG00000012448 8405 1.655 - - - - 0.868 - 0.787 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
9. WNK4 ENSGALG00000032191 962 1.632 - - - - 0.780 - - - - 0.852 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
10. NPHP4 ENSGALG00000000966 1698 1.623 - - - - - - 0.859 - - 0.764 nephrocystin 4, transcript variant X5
11. FLCN ENSGALG00000004816 4101 1.599 - - - - 0.834 - 0.765 - - - folliculin, transcript variant X1
12. RIT1 ENSGALG00000014647 7174 1.582 - - - - - - 0.757 - - 0.825 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
13. FAM178A FAM178A 2738 1.519 - - - - 0.725 - - - - 0.794
14. SYS1 ENSGALG00000003929 4487 1.507 - - - - - - 0.705 - - 0.802 SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
15. NAA16 ENSGALG00000032808 3366 1.482 - - - - - - 0.705 - - 0.777 N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
16. CLP1 ENSGALG00000007370 2047 1.472 - - - - - - - 0.722 - 0.750 cleavage and polyadenylation factor I subunit 1 [Source:NCBI gene;Acc:423131]
17. ACBD6 ACBD6 4293 1.469 - - - - 0.756 - - 0.713 - -
18. LRP12 ENSGALG00000033630 2534 1.451 - - - - 0.706 - 0.745 - - - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
19. NUDT1 ENSGALG00000004245 9034 1.435 - - - - 0.709 - 0.726 - - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
20. ENSGALG00000013233 ENSGALG00000013233 3265 0.958 - - - - - - 0.958 - - -
21. WDSUB1 ENSGALG00000012574 2038 0.957 - - - - - - 0.957 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
22. UBE3B ENSGALG00000013851 1672 0.956 - - - - - - 0.956 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
23. NCAPG2 ENSGALG00000006525 2319 0.955 - - - - - - 0.955 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
24. ZFYVE19 ENSGALG00000008460 2750 0.954 - - - - - - 0.954 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
25. C14orf80 C14orf80 1921 0.953 - - - - - - 0.953 - - -
26. CEP290 ENSGALG00000011177 1559 0.95 - - - - - - 0.950 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
27. DNAJC16 ENSGALG00000032832 750 0.95 - - - - - - 0.950 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
28. ENTPD8L ENSGALG00000008936 731 0.949 - - - - - - 0.949 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
29. ENSGALG00000003619 ENSGALG00000003619 58 0.949 - - - - - - 0.949 - - -
30. MESDC1 1013 0.948 - - - - - - 0.948 - - - mesoderm development candidate 1
31. SGSM3 ENSGALG00000012033 1839 0.948 - - - - - - 0.948 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
32. GAS6 ENSGALG00000016820 481 0.947 - - - - - - 0.947 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
33. TCTE1 ENSGALG00000010165 65 0.947 - - - - - - 0.947 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
34. NSRP1 ENSGALG00000004186 1683 0.947 - - - - - - 0.947 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
35. HESX1 ENSGALG00000005506 203 0.947 - - - - - - 0.947 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
36. UPK3BL ENSGALG00000001885 1650 0.947 - - - - - - 0.947 - - - uroplakin 3B-like
37. GRB14 ENSGALG00000020703 42 0.946 - - - - - - 0.946 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
38. MXRA5 ENSGALG00000016635 352 0.946 - - - - - - 0.946 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
39. ENSGALG00000026925 ENSGALG00000026925 119 0.945 - - - - - - 0.945 - - -
40. HEMK1 ENSGALG00000002253 40 0.945 - - - - - - 0.945 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
41. PTN ENSGALG00000040493 864 0.945 - - - - - - 0.945 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
42. CLIC3 ENSGALG00000038789 233 0.945 - - - - 0.945 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
43. SNORA31 SNORA31 183 0.945 - - - - - - 0.945 - - -
44. METTL24 ENSGALG00000041120 60 0.945 - - - - - - 0.945 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
45. FAM57A ENSGALG00000004820 1492 0.945 - - - - - - 0.945 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
46. SCUBE1 ENSGALG00000014178 91 0.945 - - - - - - 0.945 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
47. ENSGALG00000016099 ENSGALG00000016099 138 0.944 - - - - - - 0.944 - - -
48. PKN3 532 0.943 - - - - - - 0.943 - - - protein kinase N3, transcript variant X2
49. SPG11 ENSGALG00000008180 1890 0.943 - - - - - - 0.943 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
50. STON2 ENSGALG00000010579 76 0.94 - - - - 0.940 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
51. ENSGALG00000028164 ENSGALG00000028164 3325 0.94 - - - - - - 0.940 - - -
52. CCNE2 ENSGALG00000040794 1229 0.939 - - - - - - 0.939 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
53. PAQR8 ENSGALG00000016675 85 0.939 - - - - 0.939 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
54. ERMP1 ENSGALG00000000438 1136 0.938 - - - - - - 0.938 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
55. CCDC6 ENSGALG00000003165 93 0.937 - - - - 0.937 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
56. MOCS3 ENSGALG00000007986 308 0.937 - - - - 0.937 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
57. MCEE ENSGALG00000003913 1527 0.936 - - - - - - 0.936 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
58. TM2D3 ENSGALG00000026271 2566 0.936 - - - - - - 0.936 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
59. ASTE1 ENSGALG00000036171 155 0.935 - - - - 0.935 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
60. MST1 ENSGALG00000002722 994 0.935 - - - - - - 0.935 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
61. TUBA4A ENSGALG00000000433 1367 0.934 - - - - - - 0.934 - - - tubulin alpha 4a
62. CECR1 336 0.933 - - - - 0.933 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
63. ENSGALG00000002852 ENSGALG00000002852 2687 0.933 - - - - - - 0.933 - - -
64. PLCE1 ENSGALG00000039528 151 0.931 - - - - - - 0.931 - - - phospholipase C epsilon 1
65. RPIA ENSGALG00000015960 2784 0.93 - - - - - - 0.930 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
66. LFNG ENSGALG00000038515 5178 0.93 - - - - - - 0.930 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
67. XPO7 ENSGALG00000001838 1875 0.93 - - - - - - 0.930 - - - exportin 7 [Source:NCBI gene;Acc:426925]
68. SRSF4 1200 0.929 - - - - 0.929 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
69. CSPP1 1756 0.928 - - - - 0.928 - - - - - centrosome and spindle pole associated protein 1
70. PPTC7 ENSGALG00000004550 154 0.928 - - - - 0.928 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
71. SPAG9 ENSGALG00000034001 2314 0.928 - - - - - - 0.928 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
72. SDK2 ENSGALG00000031895 2682 0.928 - - - - - - 0.928 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
73. DUS2 856 0.928 - - - - 0.928 - - - - - dihydrouridine synthase 2, transcript variant X2
74. BPHL ENSGALG00000029659 501 0.928 - - - - - - 0.928 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
75. PGAP2 ENSGALG00000027762 2583 0.928 - - - - - - 0.928 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
76. NUP205 ENSGALG00000011662 4157 0.927 - - - - - - 0.927 - - - nucleoporin 205
77. USP54 ENSGALG00000005232 2749 0.927 - - - - - - 0.927 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
78. RAB1A ENSGALG00000031582 6929 0.926 - - - - - - 0.926 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
79. FAM193A ENSGALG00000015667 3075 0.926 - - - - - - 0.926 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
80. FAM171B ENSGALG00000002646 837 0.926 - - - - 0.926 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
81. SIAT7E SIAT7E 13 0.925 - - - - - - - - - 0.925
82. FTSJ2 FTSJ2 2951 0.924 - - - - - - 0.924 - - -
83. KCNC4 ENSGALG00000000400 129 0.924 - - - - 0.924 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
84. GPN3 ENSGALG00000003807 6320 0.922 - - - - - - 0.922 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
85. MBNL2 ENSGALG00000016890 3162 0.921 - - - - - - 0.921 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
86. ITSN1 ENSGALG00000036677 5727 0.92 - - - - - - 0.920 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
87. SRP72 ENSGALG00000011403 13666 0.919 - - - - - - 0.919 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
88. TPR ENSGALG00000005105 2924 0.919 - - - - - - 0.919 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
89. SPSB3 ENSGALG00000002285 1329 0.918 - - - - 0.918 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
90. CMTM3 ENSGALG00000000424 393 0.918 - - - - 0.918 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
91. SLC25A21 ENSGALG00000010117 536 0.918 - - - - - - 0.918 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
92. CCNL1 ENSGALG00000009699 1033 0.918 - - - - - - 0.918 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
93. RFX3 ENSGALG00000010179 305 0.917 - - - - - - - - - 0.917 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
94. RPA3 ENSGALG00000010700 6212 0.917 - - - - 0.917 - - - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
95. COPS8 ENSGALG00000033385 10166 0.917 - - - - - - 0.917 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
96. B4GALT3 ENSGALG00000022891 2825 0.917 - - - - - - 0.917 - - - beta-1,4-galactosyltransferase 3
97. SUGP1 ENSGALG00000042132 2771 0.916 - - - - - - 0.916 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
98. MBTPS1 ENSGALG00000003293 4843 0.916 - - - - - - 0.916 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
99. NIN ENSGALG00000012361 2284 0.915 - - - - - - 0.915 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
100. B3GAT2 ENSGALG00000031590 615 0.915 - - - - 0.915 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]

There are 644 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA