Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SCAF11

Gene Name Gene ID Reads Annotation
SCAF11 ENSGALG00000028849 2603 SR-related CTD-associated factor 11 [Source:NCBI gene;Acc:417805]











Genes with expression patterns similar to SCAF11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SCAF11 ENSGALG00000028849 2603 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD-associated factor 11 [Source:NCBI gene;Acc:417805]
2. ATRX ENSGALG00000007843 34172 1.563 0.794 - - - - 0.769 - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
3. TPCN3 ENSGALG00000008198 124 1.491 - - - - - 0.746 - - - 0.745 two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
4. USP16 ENSGALG00000015813 6803 1.421 0.714 - - - - 0.707 - - - - ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]
5. XYLT1 ENSGALG00000006757 169 0.875 - - - - - - - - - 0.875 xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
6. PIGV ENSGALG00000039883 32 0.873 - - - - - - - - - 0.873 phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
7. KLHL5 ENSGALG00000031388 2461 0.873 - - - - - - - - - 0.873 kelch like family member 5 [Source:HGNC Symbol;Acc:HGNC:6356]
8. GAA ENSGALG00000038853 158 0.867 - - - - - - - - - 0.867 glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
9. FANCA ENSGALG00000000516 250 0.86 - - - - - - - - - 0.860 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
10. WDR63 ENSGALG00000008696 15 0.857 - - - - - - - - - 0.857 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
11. SP2 ENSGALG00000000233 43 0.854 - - - - - - - - - 0.854 Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
12. SIAT7E SIAT7E 13 0.853 - - - - - - - - - 0.853
13. S1PR1 ENSGALG00000005208 12 0.853 - - - - - - - - - 0.853 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
14. CCP110 ENSGALG00000006925 59 0.85 - - - - - - - - - 0.850 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
15. PAG1 ENSGALG00000034188 9 0.849 - - - - - - - - - 0.849 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
16. TPCN2 ENSGALG00000007550 10 0.849 - - - - - - - - - 0.849 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
17. LPGAT1 ENSGALG00000009848 33 0.848 - - - - - - - - - 0.848 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
18. LANCL3 ENSGALG00000016265 9 0.846 - - - - - - - - - 0.846 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
19. CSRP3 ENSGALG00000004044 456 0.845 - - - - - - - - - 0.845 cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
20. FAM161A ENSGALG00000008810 36 0.843 - - - - - - - - - 0.843 FAM161A, centrosomal protein [Source:HGNC Symbol;Acc:HGNC:25808]
21. GLRX ENSGALG00000027483 217 0.843 - - - - - - - - - 0.843 glutaredoxin [Source:NCBI gene;Acc:396069]
22. EHD4 ENSGALG00000008950 22 0.843 - - - - - - - - - 0.843 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
23. HERPUD1 ENSGALG00000001220 18 0.843 - - - - - - - - - 0.843 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
24. AKAP10 ENSGALG00000004679 103 0.842 - - - - - - - - - 0.842 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
25. SCL SCL 69 0.841 - - - - - - - - - 0.841
26. ANKS6 ENSGALG00000013196 215 0.838 - - - - - - - - - 0.838 ankyrin repeat and sterile alpha motif domain containing 6 [Source:HGNC Symbol;Acc:HGNC:26724]
27. JAG1 ENSGALG00000009020 25 0.838 - - - - - - - - - 0.838 jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
28. FAM160A2 ENSGALG00000003416 23 0.837 - - - - - - - - - 0.837 family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
29. FER1L6 ENSGALG00000033783 196 0.835 - - - - - - - - - 0.835 fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
30. EPC1 ENSGALG00000007169 101 0.835 - - - - - - - - - 0.835 enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
31. MRVI1 ENSGALG00000005632 450 0.832 - - - - - - - - - 0.832 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
32. LONRF2 ENSGALG00000016768 193 0.829 - - - - - - - - - 0.829 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
33. DARS2 ENSGALG00000023749 2386 0.827 - - - - - - - - - 0.827 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
34. ENSGALG00000009344 ENSGALG00000009344 330 0.826 - - - - - - - - - 0.826
35. PRTFDC1 ENSGALG00000007694 111 0.825 - - - - - - - - - 0.825 phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
36. CSMD3 ENSGALG00000031578 23 0.823 - - - - - - - - - 0.823 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
37. RFESD ENSGALG00000014673 198 0.823 - - - - - - - - - 0.823 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
38. PIK3R3 ENSGALG00000010335 374 0.823 - - - - - - - - - 0.823 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
39. PLEKHA1 ENSGALG00000034548 34 0.822 - - - - - - - - - 0.822 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
40. ACSF3 ENSGALG00000035225 261 0.821 - - - - - - - - - 0.821 acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
41. ENSGALG00000021439 ENSGALG00000021439 628 0.821 - - - - - - - - - 0.821
42. PLCG2 ENSGALG00000033507 348 0.82 - - - - - - - - - 0.820 phospholipase C gamma 2 [Source:HGNC Symbol;Acc:HGNC:9066]
43. ZNF839 ENSGALG00000011368 148 0.819 - - - - - - - - - 0.819 zinc finger protein 839 [Source:HGNC Symbol;Acc:HGNC:20345]
44. RASA4 ENSGALG00000001876 178 0.817 - - - - - - - - - 0.817 RAS p21 protein activator 4 [Source:NCBI gene;Acc:417513]
45. HAUS2 ENSGALG00000009111 5323 0.816 - - - - - - - - - 0.816 HAUS augmin like complex subunit 2 [Source:NCBI gene;Acc:423237]
46. POLR3B ENSGALG00000012655 704 0.815 - - - - - - - - - 0.815 Gallus gallus RNA polymerase III subunit B (POLR3B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321490]
47. ETNPPL ENSGALG00000034741 39 0.814 - - - - - - - - - 0.814 ethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]
48. TSC22D3 ENSGALG00000027069 1222 0.813 - - - - - - - - - 0.813 TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
49. EIF2AK4 ENSGALG00000009611 2164 0.812 - - - - - 0.812 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
50. DIAPH1 DIAPH1 357 0.811 - - - - - - - - - 0.811
51. SCAF4 ENSGALG00000033965 2027 0.81 - - - - - - - - - 0.810 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
52. ZCCHC8 ENSGALG00000004486 3201 0.81 - - - - - - - - - 0.810 zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
53. RAD54L2 ENSGALG00000003243 187 0.808 - - - - - - - - - 0.808 RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
54. PQLC3 ENSGALG00000016449 39 0.807 - - - - - - - - - 0.807 PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
55. RNF126 ENSGALG00000042948 4724 0.805 - - - - - - - - - 0.805 ring finger protein 126 [Source:NCBI gene;Acc:420085]
56. PEX1 ENSGALG00000009410 902 0.805 - - - - - - - - - 0.805 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
57. ENSGALG00000019077 ENSGALG00000019077 49 0.805 - - - - - - - - - 0.805
58. SLC7A6 ENSGALG00000029324 427 0.805 - - - - - - - - - 0.805 solute carrier family 7 member 6 [Source:HGNC Symbol;Acc:HGNC:11064]
59. DENND4A ENSGALG00000041403 57 0.804 - - - - - - - - - 0.804 DENN domain containing 4A [Source:HGNC Symbol;Acc:HGNC:24321]
60. PRODH ENSGALG00000007728 1659 0.803 - - - - - - - - - 0.803 proline dehydrogenase 1
61. NPY7R ENSGALG00000021303 215 0.803 - - - - - - - - - 0.803 neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
62. ARHGEF3 ENSGALG00000005481 683 0.801 - - - - - - - - - 0.801 Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
63. RFX3 ENSGALG00000010179 305 0.799 - - - - - - - - - 0.799 regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
64. ELMSAN1 ENSGALG00000009282 79 0.798 - - - - - 0.798 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
65. IPMK ENSGALG00000002710 40 0.798 - - - - - - - - - 0.798 inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
66. AHI1 ENSGALG00000013951 719 0.797 - - - - - - - - - 0.797 Abelson helper integration site 1 [Source:HGNC Symbol;Acc:HGNC:21575]
67. ZNF330 ENSGALG00000009868 257 0.797 - - - - - - - - - 0.797 zinc finger protein 330 [Source:NCBI gene;Acc:422453]
68. CHD2 ENSGALG00000006949 1076 0.797 - - - - - - - - - 0.797 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
69. PHF5A ENSGALG00000011953 2395 0.796 - - - - - - - - - 0.796 PHD finger protein 5A [Source:NCBI gene;Acc:417991]
70. TLN1 ENSGALG00000002548 489 0.793 - - - - - - - - - 0.793 talin 1 [Source:NCBI gene;Acc:395194]
71. KIF13B 291 0.793 - - - - - - - - - 0.793 kinesin family member 13B, transcript variant X3
72. PIEZO2 ENSGALG00000042134 323 0.79 - - - - - - - - - 0.790 piezo type mechanosensitive ion channel component 2, transcript variant X7
73. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.789 - - - - - - - - - 0.789
74. ATP6AP2 ENSGALG00000016241 257 0.788 - - - - - - - - - 0.788 ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
75. CSMD2 ENSGALG00000030229 716 0.788 - - - - - - - - - 0.788 CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
76. COPS7B ENSGALG00000007752 1588 0.788 - - - - - - - - - 0.788 COP9 signalosome subunit 7B [Source:HGNC Symbol;Acc:HGNC:16760]
77. gga-mir-6683 ENSGALG00000026767 5682 0.787 - - - - - - - - - 0.787 gga-mir-6683 [Source:miRBase;Acc:MI0022504]
78. SK2 SK2 74 0.785 - - - - - - - - - 0.785
79. GATM ENSGALG00000023435 102 0.785 - - - - - - - - - 0.785 glycine amidinotransferase [Source:NCBI gene;Acc:395504]
80. PRUNE PRUNE 452 0.785 - - - - - 0.785 - - - -
81. ADNP ENSGALG00000007989 1930 0.785 - - - - - 0.785 - - - - activity dependent neuroprotector homeobox [Source:HGNC Symbol;Acc:HGNC:15766]
82. C8H1ORF27 C8H1ORF27 516 0.782 - - - - - - - - - 0.782
83. C1H11ORF70 ENSGALG00000017189 395 0.781 - - - - - - - - - 0.781 chromosome 1 open reading frame, human C11orf70 [Source:NCBI gene;Acc:418985]
84. NKIRAS1 ENSGALG00000011289 311 0.781 - - - - - - - - - 0.781 NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
85. WNK4 ENSGALG00000032191 962 0.78 - - - - - - - - - 0.780 WNK lysine deficient protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:14544]
86. ENSGALG00000026058 ENSGALG00000026058 144 0.78 - - - - - - - - - 0.780
87. PGRMC2 ENSGALG00000010209 568 0.78 - - - - - - - - - 0.780 progesterone receptor membrane component 2 [Source:NCBI gene;Acc:422501]
88. USP15 ENSGALG00000030024 2761 0.779 - - - - - - - - - 0.779 ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
89. ZNF800 ENSGALG00000033997 415 0.779 - - - - - - - - - 0.779 zinc finger protein 800 [Source:NCBI gene;Acc:417747]
90. IFT172 ENSGALG00000016509 1226 0.778 - - - - - - - - - 0.778 intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
91. DIAPH3 ENSGALG00000016937 1069 0.778 - - - - - 0.778 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
92. NPTXR ENSGALG00000041604 256 0.777 - - - - - - - - - 0.777 neuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]
93. PPFIBP2 ENSGALG00000005294 133 0.776 - - - - - - - - - 0.776 PPFIA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9250]
94. CARKD CARKD 2914 0.776 - - - - - 0.776 - - - -
95. OSTM1 ENSGALG00000015306 192 0.776 - - - - - - - - - 0.776 osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
96. VPS13B 2293 0.776 - - - - - - - - - 0.776 vacuolar protein sorting 13 homolog B
97. PSME4 ENSGALG00000008163 544 0.775 - - - - - 0.775 - - - - proteasome activator subunit 4 [Source:NCBI gene;Acc:421218]
98. DPH2 ENSGALG00000010089 2029 0.775 - - - - - - - - - 0.775 DPH2 homolog [Source:NCBI gene;Acc:424574]
99. ROBO2 ENSGALG00000015519 858 0.774 - - - - - - - - - 0.774 roundabout guidance receptor 2 [Source:HGNC Symbol;Acc:HGNC:10250]
100. NEXN ENSGALG00000008945 1504 0.773 - - - - - 0.773 - - - - nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA