Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SBNO1

Gene Name Gene ID Reads Annotation
SBNO1 ENSGALG00000003392 6731 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]











Genes with expression patterns similar to SBNO1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SBNO1 ENSGALG00000003392 6731 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
2. GTF2H2 ENSGALG00000002399 2361 2.21 - - 0.779 - - - 0.701 - - 0.730 general transcription factor IIH subunit 2, transcript variant X2
3. IFNAR2 ENSGALG00000041867 1596 1.823 - - - - - - - 0.950 - 0.873 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
4. EXO1 ENSGALG00000010748 7572 1.74 - - - - - - 0.784 0.956 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
5. XRCC5 ENSGALG00000011492 6802 1.735 - - 0.765 - - - - 0.970 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
6. SNN ENSGALG00000028876 1687 1.721 - - 0.832 - - - - - - 0.889 stannin [Source:NCBI gene;Acc:416429]
7. CETN1 ENSGALG00000026741 7243 1.711 - - - - - - 0.749 0.962 - - centrin 1 [Source:NCBI gene;Acc:422668]
8. MRPL54 ENSGALG00000027611 39450 1.71 - - - - - - 0.816 0.894 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
9. SNIP1 ENSGALG00000002010 1429 1.699 - - - - - - - 0.959 - 0.740 Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
10. RFC3 ENSGALG00000017064 7011 1.671 - - - - - - 0.733 0.938 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
11. KDM6A ENSGALG00000016217 2302 1.659 - - 0.804 - - - - - - 0.855 lysine demethylase 6A, transcript variant X14
12. ACOX1 ENSGALG00000002159 2953 1.657 - - 0.774 - - - - - - 0.883 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
13. SURF6 ENSGALG00000038413 11178 1.644 - - 0.803 - - - 0.841 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
14. TTC3 ENSGALG00000016050 4115 1.63 - - - - - - 0.727 - - 0.903 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
15. SEC22B ENSGALG00000039704 16080 1.622 - - 0.801 - - - 0.821 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
16. CEPT1 ENSGALG00000000142 4219 1.617 - - 0.734 - - - - - - 0.883 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
17. GLRX3 ENSGALG00000010464 22578 1.613 - - - - - - 0.822 - - 0.791 glutaredoxin 3 [Source:NCBI gene;Acc:423968]
18. ATF7IP ENSGALG00000011814 1571 1.591 - - 0.805 - - - - - - 0.786 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
19. SPCS3 ENSGALG00000010839 19106 1.58 - - 0.803 - - - 0.777 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
20. CTCF 10811 1.578 - - - - - - 0.727 - - 0.851 CCCTC-binding factor, transcript variant X2
21. ENSGALG00000017396 ENSGALG00000017396 9028 1.577 - - - - - - 0.703 0.874 - -
22. EMC7 ENSGALG00000009637 4969 1.575 - - - - - - 0.810 - - 0.765 ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
23. ARHGAP11A ENSGALG00000009731 6817 1.573 - - - - - - 0.720 - - 0.853 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
24. CDC45 ENSGALG00000001616 8432 1.572 - - 0.839 - - - 0.733 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
25. DNAJC24 ENSGALG00000012130 1882 1.541 - - 0.755 - - - - - - 0.786 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
26. CEP70 ENSGALG00000012087 7992 1.536 - - - - - - 0.778 - - 0.758 centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
27. TRIP12 ENSGALG00000002929 11713 1.534 - - - - - - 0.827 0.707 - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
28. TOR1AIP1 ENSGALG00000029238 5843 1.528 - - - - - - 0.705 - - 0.823 torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
29. PRPF40A ENSGALG00000012526 7724 1.527 - - 0.810 - - - 0.717 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
30. TPP2 ENSGALG00000016865 7509 1.505 - - 0.802 - - - - - - 0.703 tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
31. WDR92 ENSGALG00000008760 3934 1.5 - - 0.730 - - - 0.770 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
32. SHROOM2 ENSGALG00000030802 4517 1.499 - - 0.715 - - - 0.784 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
33. YBX3 ENSGALG00000031890 819 1.499 - - 0.738 - - - - - - 0.761 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
34. GTF2H5 ENSGALG00000013733 12293 1.498 - - - - - - 0.701 0.797 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
35. HOXA7 ENSGALG00000026989 6746 1.483 - - 0.751 - - - 0.732 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
36. CSTF3 ENSGALG00000011685 4711 1.48 - - 0.731 - - - - - - 0.749 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
37. SUCLG2 ENSGALG00000007652 9688 1.47 - - 0.749 - - - - - - 0.721 succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
38. COQ7 ENSGALG00000006861 5118 1.469 - - - - - - 0.705 - - 0.764 coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
39. MRPL15 ENSGALG00000041086 16820 1.462 - - - - - - 0.722 - - 0.740 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
40. DNPEP ENSGALG00000011318 10623 1.46 - - - - - - 0.729 - - 0.731 aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
41. EVI5 4722 1.453 - - - - - - 0.719 - - 0.734 ecotropic viral integration site 5, transcript variant X1
42. NUPL1 NUPL1 8197 1.451 - - 0.703 - - - 0.748 - - -
43. PSMB2 ENSGALG00000026421 51885 1.435 - - 0.726 - - - 0.709 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
44. USP8 ENSGALG00000005894 4499 1.434 - - 0.707 - - - - - - 0.727 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
45. URM1 ENSGALG00000004971 17880 1.434 - - 0.708 - - - 0.726 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
46. STAM ENSGALG00000035287 7649 1.433 - - 0.707 - - - - - - 0.726 signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
47. SKAP2 ENSGALG00000030081 13746 1.422 - - - - - - 0.708 0.714 - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
48. EHD3 ENSGALG00000009086 14407 1.415 - - - - - - 0.713 - - 0.702 EH domain containing 3 [Source:NCBI gene;Acc:421306]
49. TPD52 ENSGALG00000040167 9891 0.994 - - - - - - - 0.994 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
50. INPP5A ENSGALG00000010493 6769 0.993 - - - - - - - 0.993 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
51. NUP107 ENSGALG00000009934 2097 0.992 - - - - - - - 0.992 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
52. ANKRD11 ENSGALG00000006222 12327 0.985 - - - - - - - 0.985 - - ankyrin repeat domain 11, transcript variant X2
53. ENSGALG00000023609 ENSGALG00000023609 6933 0.962 - - - - - - - 0.962 - -
54. TMEM126A ENSGALG00000014066 6149 0.962 - - - - - - - 0.962 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
55. TMEM192 ENSGALG00000009528 2428 0.962 - - - - - - - 0.962 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
56. CENPL ENSGALG00000038411 4867 0.962 - - - - - - - 0.962 - - centromere protein L [Source:NCBI gene;Acc:426563]
57. RNFT1 ENSGALG00000005205 2888 0.961 - - - - - - - 0.961 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
58. C6ORF192 C6ORF192 4224 0.961 - - - - - - - 0.961 - -
59. FUNDC2 ENSGALG00000029585 9334 0.961 - - - - - - - 0.961 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
60. NVL ENSGALG00000009322 5286 0.96 - - - - - - - 0.960 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
61. SLC35D1 ENSGALG00000011121 4456 0.96 - - - - - - - 0.960 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
62. RCOR3 ENSGALG00000009871 7022 0.96 - - - - - - - 0.960 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
63. CRELD2 ENSGALG00000008551 2084 0.96 - - - - - - - 0.960 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
64. ATE1 ENSGALG00000009502 3751 0.96 - - - - - - - 0.960 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
65. CDCA7 ENSGALG00000040833 7484 0.96 - - - - - - - 0.960 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
66. ELAVL4 ENSGALG00000010533 4978 0.959 - - - - - - - 0.959 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
67. MAP2K2 ENSGALG00000001267 3857 0.959 - - - - - - - 0.959 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
68. RAI2 ENSGALG00000016538 1074 0.959 - - - - - - - 0.959 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
69. RNF168 ENSGALG00000006392 507 0.959 - - - - - - - 0.959 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
70. PIGL ENSGALG00000004492 669 0.959 - - - - - - - 0.959 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
71. CRNKL1 ENSGALG00000008429 7280 0.959 - - - - - - - 0.959 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
72. ENSGALG00000012250 ENSGALG00000012250 581 0.959 - - - - - - - 0.959 - -
73. ATP2B4 ENSGALG00000003601 3746 0.959 - - - - - - - 0.959 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
74. PMP22 ENSGALG00000031425 5358 0.959 - - - - - - - 0.959 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
75. RFT1 ENSGALG00000001945 2446 0.959 - - - - - - - 0.959 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
76. ZNF319 ENSGALG00000000999 1272 0.959 - - - - - - - 0.959 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
77. PDCD6IP ENSGALG00000033500 580 0.958 - - - - - - - 0.958 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
78. PDHB ENSGALG00000029576 12254 0.958 - - - - - - - 0.958 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
79. RBM7 ENSGALG00000007017 8779 0.958 - - - - - - - 0.958 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
80. FBF1 ENSGALG00000002179 1738 0.958 - - - - - - - 0.958 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
81. NBL1 ENSGALG00000040297 8165 0.958 - - - - - - - 0.958 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
82. SPDYA ENSGALG00000017392 503 0.958 - - - - - - - 0.958 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
83. PPM1D ENSGALG00000035610 6530 0.957 - - - - - - - 0.957 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
84. DLC1 ENSGALG00000013715 5297 0.957 - - - - - - - 0.957 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
85. ALS2 ENSGALG00000008415 2576 0.957 - - - - - - - 0.957 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
86. PPP3R1 ENSGALG00000023648 3417 0.954 - - - - - - - 0.954 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
87. TTL ENSGALG00000008614 3991 0.954 - - - - - - - 0.954 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
88. gga-mir-6587 ENSGALG00000026386 9441 0.953 - - - - - - - 0.953 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
89. YAF2 ENSGALG00000009540 8452 0.952 - - - - - - - 0.952 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
90. G3BP2 ENSGALG00000010882 21129 0.952 - - - - - - - 0.952 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
91. JSC JSC 7982 0.947 - - - - - - - 0.947 - -
92. COX7A2L ENSGALG00000037996 13646 0.944 - - - - - - - 0.944 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
93. AP2B1 ENSGALG00000042125 13229 0.933 - - - - - - - 0.933 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
94. KIAA0196 KIAA0196 4011 0.931 - - - - - - - 0.931 - -
95. GARS ENSGALG00000005694 18264 0.93 - - - - - - - 0.930 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
96. XPO5 ENSGALG00000010341 24765 0.921 - - - - - - - 0.921 - - exportin 5 [Source:NCBI gene;Acc:421450]
97. LRPPRC ENSGALG00000009967 17091 0.919 - - - - - - - 0.919 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
98. PDCD7 ENSGALG00000021027 3807 0.916 - - - - - - - - - 0.916 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
99. SFT2D1 ENSGALG00000020005 10855 0.915 - - - - - - - 0.915 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
100. CTK-1 CTK-1 1618 0.912 - - - - - - - - - 0.912

There are 898 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA