Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SBF1

Gene Name Gene ID Reads Annotation
SBF1 ENSGALG00000043178 32 SET binding factor 1, transcript variant X12











Genes with expression patterns similar to SBF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SBF1 ENSGALG00000043178 32 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 SET binding factor 1, transcript variant X12
2. ENSGALG00000015888 ENSGALG00000015888 12 1.926 - - - - 1.000 - - 0.926 - -
3. ENSGALG00000014932 ENSGALG00000014932 3 1 - - - - 1.000 - - - - -
4. CTH ENSGALG00000011331 2390 1 - - - - 1.000 - - - - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
5. HPGD ENSGALG00000010769 5 1 - - - - 1.000 - - - - - 15-hydroxyprostaglandin dehydrogenase [Source:NCBI gene;Acc:422567]
6. IL13RA2 ENSGALG00000020316 22 1 - - - - 1.000 - - - - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
7. TGM4 ENSGALG00000033171 19 1 - - - - 1.000 - - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
8. LRRC49 ENSGALG00000004059 29 1 - - - - - - - 1.000 - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
9. FGL2 ENSGALG00000008306 15 1 - - - - 1.000 - - - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
10. MCM9 ENSGALG00000014883 8 1 - - - - 1.000 - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
11. OVST_1 ENSGALG00000011930 9 1 - - - - 1.000 - - - - - ovostatin [Source:NCBI gene;Acc:396151]
12. VILL ENSGALG00000005763 4 0.997 - - - - - - - 0.997 - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
13. TIMP2 ENSGALG00000027070 33 0.997 - - - - - - - 0.997 - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
14. ENSGALG00000018356 ENSGALG00000018356 22 0.997 - - - - - - - 0.997 - -
15. PGAP3 ENSGALG00000022030 87 0.997 - - - - - - - 0.997 - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
16. DPH1 ENSGALG00000003082 5 0.997 - - - - - - - 0.997 - - diphthamide biosynthesis 1 [Source:NCBI gene;Acc:417564]
17. B3GAT1L ENSGALG00000015075 2 0.997 - - - - - - - 0.997 - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
18. CDH6 ENSGALG00000012917 17 0.997 - - - - - - - 0.997 - - cadherin 6 [Source:NCBI gene;Acc:414842]
19. MFSD11 ENSGALG00000001777 8 0.997 - - - - - - - 0.997 - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
20. SMIM10 SMIM10 2 0.997 - - - - - - - 0.997 - -
21. SLCO4A1 ENSGALG00000005460 109 0.997 - - - - - - - 0.997 - - solute carrier organic anion transporter family member 4A1 [Source:NCBI gene;Acc:419231]
22. STRA8 ENSGALG00000011722 4 0.997 - - - - - - - 0.997 - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
23. FAM3D ENSGALG00000007152 4 0.997 - - - - - - - 0.997 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
24. TG ENSGALG00000039509 19 0.997 - - - - - - - 0.997 - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
25. GTF3C3 ENSGALG00000007958 6 0.997 - - - - - - - 0.997 - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
26. ANKS3 ENSGALG00000000643 2 0.997 - - - - - - - 0.997 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29422]
27. CYP2U1 ENSGALG00000027908 13 0.997 - - - - - - - 0.997 - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
28. SCG2 ENSGALG00000029819 26 0.989 - - - - - - - 0.989 - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
29. ENSGALG00000025953 ENSGALG00000025953 65 0.981 - - - - - - - 0.981 - -
30. EPAS1 ENSGALG00000010005 14 0.959 - - - - 0.959 - - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
31. SLC2A5 ENSGALG00000002466 26 0.959 - - - - 0.959 - - - - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
32. SLC35D3 ENSGALG00000030545 55 0.958 - - - - - - - 0.958 - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
33. ENPP4 ENSGALG00000016708 18 0.955 - - - - - - - 0.955 - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
34. MYCT1 ENSGALG00000013603 44 0.948 - - - - 0.948 - - - - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
35. CTNNA2 ENSGALG00000027853 452 0.945 - - - - - - - 0.945 - - catenin alpha 2 [Source:NCBI gene;Acc:396035]
36. FUT13 FUT13 49 0.945 - - - - - - - 0.945 - -
37. PDE3A ENSGALG00000013143 28 0.944 - - - - - - - 0.944 - - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
38. CFAP99 ENSGALG00000015685 32 0.934 - - - - - - - 0.934 - - cilia and flagella associated protein 99 [Source:HGNC Symbol;Acc:HGNC:51180]
39. CLCN4 ENSGALG00000016607 8 0.932 - - - - 0.932 - - - - - chloride voltage-gated channel 4 [Source:HGNC Symbol;Acc:HGNC:2022]
40. ENSGALG00000013985 ENSGALG00000013985 11 0.931 - - - - - - - 0.931 - -
41. ARSE ENSGALG00000016654 8 0.93 - - - - 0.930 - - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
42. SLC22A18 ENSGALG00000006454 24 0.92 - - - - 0.920 - - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
43. MAML2 ENSGALG00000017199 13 0.919 - - - - - - - 0.919 - - mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]
44. ST6GAL2 ENSGALG00000016803 24 0.919 - - - - - - - 0.919 - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
45. PTPN23 ENSGALG00000038522 93 0.91 - - - - - - - 0.910 - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
46. IGSF6 ENSGALG00000007059 25 0.906 - - - - - 0.906 - - - - immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]
47. ENSGALG00000008594 ENSGALG00000008594 54 0.899 - - - - 0.899 - - - - -
48. ADAP2 ENSGALG00000003319 134 0.897 - - - - - - - 0.897 - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
49. CCDC96 9 0.892 - - - - 0.892 - - - - - coiled-coil domain containing 96
50. ENSGALG00000010456 ENSGALG00000010456 4 0.889 - - - - - - - 0.889 - -
51. HOXB9 ENSGALG00000001276 55 0.885 - - - - - - - 0.885 - - homeobox B9 [Source:HGNC Symbol;Acc:HGNC:5120]
52. ENSGALG00000015743 ENSGALG00000015743 22 0.881 - - - - - - - 0.881 - -
53. ACN9 ACN9 269 0.88 - - - - 0.880 - - - - -
54. MGAT4D ENSGALG00000009830 23 0.878 - - - - - - - 0.878 - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
55. TYRO3 ENSGALG00000008631 23 0.874 - - - - 0.874 - - - - - TYRO3 protein tyrosine kinase [Source:NCBI gene;Acc:395336]
56. DCLRE1C ENSGALG00000013926 34 0.87 - - - - - - - 0.870 - - DNA cross-link repair 1C [Source:NCBI gene;Acc:430764]
57. ENSGALG00000019267 ENSGALG00000019267 11 0.867 - - - - 0.867 - - - - -
58. AGRP ENSGALG00000002244 27 0.863 - - - - - - - 0.863 - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
59. HTR2A ENSGALG00000016992 73 0.859 - - - - - - - 0.859 - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
60. ARHGEF37 ENSGALG00000039652 28 0.854 - - - - 0.854 - - - - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
61. MED12 ENSGALG00000036322 814 0.852 - - - - - - - 0.852 - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
62. P2RY13 ENSGALG00000039432 16 0.848 - - - - - - - 0.848 - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
63. SPIRE1 ENSGALG00000013817 155 0.843 - - - - - - - 0.843 - - spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
64. NFIL3 ENSGALG00000015209 15 0.839 - - - - 0.839 - - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
65. RCAN1 ENSGALG00000016014 95 0.838 - - - - - - - 0.838 - - regulator of calcineurin 1 [Source:NCBI gene;Acc:418510]
66. GFPT2 ENSGALG00000039705 562 0.836 - - - - - - - 0.836 - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
67. AHR2 ENSGALG00000023742 21 0.83 - - - - - - - 0.830 - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
68. CALCA CALCA 682 0.83 - - 0.830 - - - - - - -
69. TBC1D9B ENSGALG00000005856 115 0.83 - - - - - - - 0.830 - - TBC1 domain family member 9B [Source:HGNC Symbol;Acc:HGNC:29097]
70. CCDC113 20 0.83 - - - - - - - 0.830 - - coiled-coil domain containing 113, transcript variant X2
71. CLCNKB ENSGALG00000003713 27 0.827 - - - - 0.827 - - - - - chloride voltage-gated channel Kb, transcript variant X3
72. DNAJB13 ENSGALG00000017317 12 0.822 - - - - - - - 0.822 - - DnaJ heat shock protein family (Hsp40) member B13 [Source:HGNC Symbol;Acc:HGNC:30718]
73. PTPN13 ENSGALG00000011078 62 0.822 - - - - - - - 0.822 - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
74. PXK ENSGALG00000007052 121 0.82 - - - - - 0.820 - - - - PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
75. ZFP64 ENSGALG00000038858 177 0.814 - - - - - - - 0.814 - - ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
76. HAVCR1 ENSGALG00000017362 25 0.814 - - - - 0.814 - - - - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
77. NPTXR ENSGALG00000041604 256 0.812 - - - - 0.812 - - - - - neuronal pentraxin receptor [Source:HGNC Symbol;Acc:HGNC:7954]
78. CRB2 ENSGALG00000001169 23 0.812 - - - - - - - 0.812 - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
79. SLC12A2 ENSGALG00000014690 48 0.806 - - - - 0.806 - - - - - solute carrier family 12 member 2 [Source:HGNC Symbol;Acc:HGNC:10911]
80. THSD7A ENSGALG00000010718 149 0.805 - - - - - - - 0.805 - - thrombospondin type 1 domain containing 7A [Source:HGNC Symbol;Acc:HGNC:22207]
81. DNM1 ENSGALG00000004852 292 0.803 - - - - - - - 0.803 - - dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
82. PDIK1L ENSGALG00000001463 80 0.802 - - - - - - - 0.802 - - PDLIM1 interacting kinase 1 like [Source:HGNC Symbol;Acc:HGNC:18981]
83. RNF123 ENSGALG00000002486 91 0.801 - - - - 0.801 - - - - - ring finger protein 123 [Source:NCBI gene;Acc:415923]
84. ATP6V0E1 10 0.8 - - - - 0.800 - - - - - ATPase H+ transporting V0 subunit e1
85. ETNK1 ENSGALG00000013205 18 0.797 - - - - - - - 0.797 - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
86. CLEC16A ENSGALG00000007167 66 0.787 - - - - - - - - - 0.787 C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
87. BACH1 ENSGALG00000015828 114 0.786 - - - - - - - 0.786 - - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
88. CHST1 ENSGALG00000008440 156 0.784 - - - - - - - 0.784 - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
89. FHIT ENSGALG00000007172 580 0.78 - - - - - - - 0.780 - - fragile histidine triad [Source:NCBI gene;Acc:416071]
90. ENSGALG00000006278 ENSGALG00000006278 202 0.778 - - - - 0.778 - - - - -
91. TRAK1 ENSGALG00000038733 59 0.776 - - - - - - - 0.776 - - trafficking kinesin protein 1 [Source:HGNC Symbol;Acc:HGNC:29947]
92. ANKEF1 ENSGALG00000008996 12 0.773 - - - - - - - - - 0.773 ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
93. TAL2 ENSGALG00000023114 17 0.772 - - 0.772 - - - - - - - TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]
94. KHDRBS3 ENSGALG00000031519 501 0.772 - - - - 0.772 - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
95. FHAD1 ENSGALG00000034761 3 0.771 - - - - - 0.771 - - - - forkhead associated phosphopeptide binding domain 1 [Source:HGNC Symbol;Acc:HGNC:29408]
96. MX MX 45 0.761 - - - - 0.761 - - - - -
97. ZBED1 54 0.759 - - - - 0.759 - - - - - zinc finger BED-type containing 1, transcript variant X2
98. BSPRY ENSGALG00000008861 98 0.757 - - - - - - - 0.757 - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
99. VPS72 ENSGALG00000000793 329 0.753 - - - - - - - 0.753 - - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
100. HOXB6 ENSGALG00000037619 435 0.749 - - - - - 0.749 - - - - homeobox B6 [Source:HGNC Symbol;Acc:HGNC:5117]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA