Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SBDS

Gene Name Gene ID Reads Annotation
SBDS ENSGALG00000027989 112 SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]











Genes with expression patterns similar to SBDS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SBDS ENSGALG00000027989 112 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
2. SLC30A9 ENSGALG00000031415 36 1.537 - - 0.728 - - - - - - 0.809 solute carrier family 30 member 9
3. COQ2 ENSGALG00000041294 25 1.494 - - - - - 0.711 - - - 0.783 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
4. ZNF385C ENSGALG00000003403 9 1.461 - - 0.729 - - - - 0.732 - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
5. SERAC1 ENSGALG00000013732 24 0.915 - - - - - - - - - 0.915 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
6. BMP2K ENSGALG00000010885 37 0.912 - - - - - - - - - 0.912 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
7. INADL INADL 51 0.91 - - - - - - - - - 0.910
8. PHF11 ENSGALG00000019094 770 0.909 - - - - - - - - - 0.909 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
9. FAM154B FAM154B 175 0.896 - - - - - - - - - 0.896
10. TRMT13 ENSGALG00000005290 95 0.887 - - - - - 0.887 - - - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
11. PXK ENSGALG00000007052 121 0.885 - - - - - - - - - 0.885 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
12. COL21A1 ENSGALG00000016292 35 0.885 - - 0.885 - - - - - - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
13. ENSGALG00000012518 ENSGALG00000012518 25 0.882 - - 0.882 - - - - - - -
14. TRAK2 ENSGALG00000008370 46 0.881 - - - - - - - - - 0.881 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
15. PKD2 ENSGALG00000010921 55 0.878 - - - - - - - - - 0.878 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
16. OSBPL2 ENSGALG00000005195 94 0.876 - - - - - - - - - 0.876 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
17. gga-mir-6544 ENSGALG00000027916 19 0.875 - - - - - - - - - 0.875 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
18. TNFAIP3 ENSGALG00000013861 11 0.875 - - - - - - - - - 0.875 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
19. HOXA1 ENSGALG00000028095 137 0.875 - - 0.875 - - - - - - - homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
20. NMBR ENSGALG00000013813 15 0.874 - - - - - - - - - 0.874 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
21. C3orf58 ENSGALG00000002347 27 0.873 - - - - - - - - - 0.873 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
22. TMEM129 ENSGALG00000015710 1519 0.872 - - - - - - - - - 0.872 transmembrane protein 129 [Source:NCBI gene;Acc:422900]
23. BOK ENSGALG00000005772 117 0.87 - - - - - - - - - 0.870 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
24. KCNB1 ENSGALG00000004758 620 0.869 - - - - - - - - - 0.869 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
25. ERRFI1 ENSGALG00000000535 83 0.868 - - - - - - - - - 0.868 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
26. CEP44 ENSGALG00000020201 1060 0.865 - - - - - - - - - 0.865 centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
27. ZMYND10 ENSGALG00000035883 58 0.864 - - - - - - - - - 0.864 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
28. ARID3C ENSGALG00000005839 646 0.864 - - 0.864 - - - - - - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
29. TNN ENSGALG00000004538 21 0.863 - - - - - - - - - 0.863 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
30. ZMIZ1 ENSGALG00000004850 114 0.863 - - - - - - - - - 0.863 zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]
31. TBX5 ENSGALG00000008253 820 0.862 - - - - - - - - - 0.862 T-box 5 [Source:NCBI gene;Acc:373988]
32. TRMT61A ENSGALG00000011522 14 0.862 - - - - - - - - - 0.862 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
33. SENP7 ENSGALG00000044642 48 0.862 - - - - - - - - - 0.862 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
34. AKAP11 ENSGALG00000022739 82 0.86 - - - - - - - - - 0.860 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
35. CLIC3 ENSGALG00000038789 233 0.86 - - - - - - - - - 0.860 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
36. SMEK1 SMEK1 95 0.858 - - - - - - - - - 0.858
37. TM6SF1 ENSGALG00000006027 20 0.856 - - - - - - - - - 0.856 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
38. SLC7A2 ENSGALG00000013627 58 0.856 - - - - - - - - - 0.856 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
39. TMEM200B ENSGALG00000024318 117 0.856 - - - - - - - - - 0.856 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
40. SLC20A1 ENSGALG00000013740 40 0.855 - - - - - - - - - 0.855 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
41. TNFAIP2 ENSGALG00000011446 32 0.855 - - - - - - - - - 0.855 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
42. KAT6B ENSGALG00000005035 301 0.852 - - - - - - - - - 0.852 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
43. ING5 ENSGALG00000006317 149 0.851 - - - - - - - - - 0.851 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
44. ANKRD40L ENSGALG00000026189 887 0.848 - - - - - 0.848 - - - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
45. NAPG ENSGALG00000013932 67 0.846 - - - - - - - - - 0.846 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
46. GSS ENSGALG00000003281 57 0.846 - - - - - - - - - 0.846 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
47. MYCN ENSGALG00000016462 1930 0.843 - - - - - - - - - 0.843 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
48. PDE3A ENSGALG00000013143 28 0.842 - - - - - - - - - 0.842 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
49. KIAA0895 ENSGALG00000036301 280 0.84 - - - - - - - - - 0.840 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
50. TRAF-5 TRAF-5 102 0.839 - - - - - - - - - 0.839
51. CFD ENSGALG00000040832 222 0.839 - - 0.839 - - - - - - - complement factor D [Source:HGNC Symbol;Acc:HGNC:2771]
52. CLRN1 ENSGALG00000010384 7 0.838 - - - 0.838 - - - - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
53. GPR183 ENSGALG00000016881 5 0.838 - - - 0.838 - - - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
54. MUC16 3 0.838 - - - 0.838 - - - - - - mucin 16, cell surface associated
55. SRR ENSGALG00000003155 93 0.838 - - - - - - - - - 0.838 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
56. TEKT4 ENSGALG00000005247 20 0.838 - - - 0.838 - - - - - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
57. SLC16A3 ENSGALG00000002728 323 0.838 - - - 0.838 - - - - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
58. ST8SIA1 ENSGALG00000013211 14 0.838 - - - 0.838 - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
59. LMBR1 ENSGALG00000030379 29 0.837 - - - - - - - - - 0.837 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
60. SNORA81 SNORA81 15 0.835 - - - 0.835 - - - - - -
61. SOUL ENSGALG00000012464 52 0.832 - - - - 0.832 - - - - - SOUL protein [Source:NCBI gene;Acc:395567]
62. ROGDI ENSGALG00000001841 313 0.831 - - - - - - - - - 0.831 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
63. ZNF385B ENSGALG00000009012 290 0.831 - - - - - - - - - 0.831 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
64. ZEB2 ENSGALG00000040465 315 0.828 - - - - - - - - - 0.828 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
65. ENSGALG00000018386 ENSGALG00000018386 175912 0.827 - - - - - - - - - 0.827
66. TGFBRAP1 ENSGALG00000016795 81 0.819 - - - - - - - - - 0.819 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
67. ACSF3 ENSGALG00000035225 261 0.818 - - - - - - - 0.818 - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
68. ENSGALG00000003440 ENSGALG00000003440 42 0.817 - - - - 0.817 - - - - -
69. KIF24 ENSGALG00000005806 124 0.816 - - - - - - - - - 0.816 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
70. LRRC52 ENSGALG00000003443 20 0.816 - - - 0.816 - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
71. BLOC1S2 ENSGALG00000005794 544 0.815 - - - - - - - - - 0.815 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
72. STEAP1 ENSGALG00000009006 16 0.813 - - - 0.813 - - - - - - STEAP family member 1
73. GRIA4 ENSGALG00000038995 29 0.812 - - - 0.812 - - - - - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
74. CREB5 ENSGALG00000038265 92 0.811 - - - - - - - - - 0.811 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
75. MYH11 ENSGALG00000006520 166 0.809 - - - - - - - - - 0.809 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
76. LIN28A ENSGALG00000036022 542 0.809 - - - - - - - - - 0.809 lin-28 homolog A [Source:NCBI gene;Acc:428206]
77. EXOSC8 ENSGALG00000017048 2939 0.808 - - - - - - - - - 0.808 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
78. DMXL1 ENSGALG00000002227 88 0.808 - - - - - - - - - 0.808 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
79. MPP3 ENSGALG00000042521 1372 0.808 - - - - - - - - - 0.808 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
80. NIPA1 ENSGALG00000039811 20 0.808 - - - 0.808 - - - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
81. MVP ENSGALG00000040471 1407 0.807 - - - - - - - - - 0.807 major vault protein [Source:NCBI gene;Acc:420049]
82. FBXO22 ENSGALG00000039897 377 0.807 - - 0.807 - - - - - - - F-box protein 22 [Source:NCBI gene;Acc:415355]
83. CPLX1 ENSGALG00000015332 55 0.806 - - - - - - - - - 0.806 complexin 1 [Source:HGNC Symbol;Acc:HGNC:2309]
84. NME6 ENSGALG00000038044 1231 0.806 - - - - - - - - - 0.806 NME/NM23 nucleoside diphosphate kinase 6
85. KCNB2 ENSGALG00000031693 31 0.806 - - - - - - - - - 0.806 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
86. JMJD1C ENSGALG00000002942 4556 0.804 - - - - - - - - - 0.804 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
87. EIF2B4 ENSGALG00000033575 3801 0.803 - - - - - - - - - 0.803 eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
88. HS1BP3 ENSGALG00000016486 380 0.802 - - - - - - - - - 0.802 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
89. SRRD ENSGALG00000005614 234 0.802 - - - - - - - - - 0.802 SRR1 domain containing [Source:NCBI gene;Acc:416908]
90. PUSL1 ENSGALG00000001701, ENSGALG00000001714 123 0.801 - - - - - 0.801 - - - - pseudouridylate synthase-like 1, transcript variant X8
91. ENSGALG00000008594 ENSGALG00000008594 54 0.799 - - 0.799 - - - - - - -
92. CDK5RAP1 ENSGALG00000006738 2628 0.799 - - 0.799 - - - - - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
93. ALDH6A1 ENSGALG00000010211 29 0.799 - - - - - - - - - 0.799 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
94. MGRN1 ENSGALG00000037492 372 0.798 - - - - - 0.798 - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
95. DGKH ENSGALG00000016959 75 0.798 - - 0.798 - - - - - - - diacylglycerol kinase eta [Source:HGNC Symbol;Acc:HGNC:2854]
96. SMOC2 ENSGALG00000011205 340 0.798 - - - - - - - - - 0.798 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
97. SMPDL3A ENSGALG00000030275 246 0.798 - - - - - - - - - 0.798 sphingomyelin phosphodiesterase acid like 3A
98. MRM1 ENSGALG00000039523 2009 0.794 - - - - - - - - - 0.794 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
99. BEST3 ENSGALG00000010029 11 0.794 - - - 0.794 - - - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
100. NR5A2 ENSGALG00000002182 392 0.794 - - - - - - - - - 0.794 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]

There are 246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA