Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SALL3

Gene Name Gene ID Reads Annotation
SALL3 ENSGALG00000041404 29 spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]











Genes with expression patterns similar to SALL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SALL3 ENSGALG00000041404 29 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 spalt like transcription factor 3 [Source:NCBI gene;Acc:395359]
2. CFUC-TIX CFUC-TIX 1 1.533 - - - - - 0.789 - - - 0.744
3. CRHBP ENSGALG00000014994 8 1.447 - - - - 0.736 - 0.711 - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
4. FOXP4 ENSGALG00000033497 13 1 - - - - 1.000 - - - - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
5. SNX8 ENSGALG00000004255 4 1 - - - - 1.000 - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
6. JDP2 ENSGALG00000010322 11 1 - - - - 1.000 - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
7. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - - 1.000 - - - - -
8. SASH1 ENSGALG00000012342 28 1 - - - - 1.000 - - - - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
9. ZFYVE26 ENSGALG00000028762 18 1 - - - - 1.000 - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
10. ABCC3 ENSGALG00000007522 340 1 - - - - 1.000 - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
11. RD3 ENSGALG00000009861 2 1 - - - - 1.000 - - - - - retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]
12. RNF157 ENSGALG00000002008 1 1 - - - - 1.000 - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
13. CMTM4 ENSGALG00000005251 5 1 - - - - 1.000 - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
14. ATHL1 ATHL1 16 0.996 - - - - - 0.996 - - - -
15. CHOBF-1 CHOBF-1 41 0.912 - - - - - - 0.912 - - -
16. SLC17A6 ENSGALG00000039254 16 0.898 - - - - 0.898 - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
17. IMPG1 ENSGALG00000015897 4 0.863 - - - - 0.863 - - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
18. MOCOS ENSGALG00000013149 25 0.863 - - - - 0.863 - - - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
19. ENSGALG00000003618 ENSGALG00000003618 12 0.848 - - - - - - - - - 0.848
20. IGFBP4 ENSGALG00000040672 608 0.846 - - - - - 0.846 - - - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
21. CYP2J19 ENSGALG00000011413 22 0.826 - - - - - - 0.826 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
22. SNX18 ENSGALG00000014914 7 0.826 - - - - - - 0.826 - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
23. HPGDS ENSGALG00000010402 343 0.826 - - - - - - 0.826 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
24. WFIKKN2 ENSGALG00000007367 9 0.826 - - - - - - 0.826 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
25. TTC9 ENSGALG00000017652 16 0.826 - - - - - - 0.826 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
26. PLXNB1 23 0.826 - - - - - - 0.826 - - - plexin B1, transcript variant X2
27. ZNF362 ENSGALG00000026558 11 0.826 - - - - - - 0.826 - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
28. DRD2 ENSGALG00000007794 399 0.826 - - - - - - 0.826 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
29. CHADL ENSGALG00000011970 42 0.826 - - - - - - 0.826 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
30. NKX2-5 ENSGALG00000002886 81 0.826 - - - - - - 0.826 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
31. ENSGALG00000000865 ENSGALG00000000865 46 0.826 - - - - - - 0.826 - - -
32. SIM1 ENSGALG00000015466 111 0.822 - - - - - - 0.822 - - - SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
33. PIRT 41 0.821 - - - - - - - - - 0.821 phosphoinositide-interacting regulator of transient receptor potential channels
34. WNT7B ENSGALG00000036255 3343 0.813 - - - - - 0.813 - - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
35. CALB1 ENSGALG00000032282 16 0.811 - - - - - - 0.811 - - - calbindin 1 [Source:NCBI gene;Acc:396519]
36. RHBDL3 ENSGALG00000003426 19 0.794 - - - - 0.794 - - - - - rhomboid like 3 [Source:HGNC Symbol;Acc:HGNC:16502]
37. DDTNFR23 ENSGALG00000006407 4 0.789 - - - - - 0.789 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
38. KLHL23 ENSGALG00000020737 13 0.789 - - - - - 0.789 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
39. CCDC64 CCDC64 2 0.789 - - - - - 0.789 - - - -
40. SCARNA23 SCARNA23 2 0.789 - - - - - 0.789 - - - -
41. CHSY1 ENSGALG00000026468 4 0.789 - - - - - 0.789 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
42. ENSGALG00000026368 ENSGALG00000026368 1 0.789 - - - - - 0.789 - - - -
43. GPR12 ENSGALG00000017102 4 0.789 - - - - - 0.789 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
44. PAPPA ENSGALG00000007079 6 0.789 - - - - - 0.789 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
45. P2RX3 ENSGALG00000040479 5 0.789 - - - - - 0.789 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
46. SRRM3 ENSGALG00000001932 12 0.789 - - - - - 0.789 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
47. ST6GALNAC3 ENSGALG00000009027 17 0.789 - - - - - 0.789 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
48. FGL1 ENSGALG00000013606 42 0.789 - - - - - 0.789 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
49. ACRBP 0 0.789 - - - - - 0.789 - - - - acrosin binding protein
50. ENSGALG00000022715 ENSGALG00000022715 13 0.789 - - - - - 0.789 - - - -
51. FAM149B1 ENSGALG00000002693 16 0.789 - - - - - 0.789 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
52. MAPK11 ENSGALG00000040023 15 0.789 - - - - - 0.789 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
53. CTSD ENSGALG00000006613 4 0.789 - - - - - 0.789 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
54. SERPINB5 ENSGALG00000012873 24 0.789 - - - - - 0.789 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
55. GVINP1 ENSGALG00000016556 4 0.789 - - - - - 0.789 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
56. WDR63 ENSGALG00000008696 15 0.789 - - - - - 0.789 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
57. MARCO ENSGALG00000012119 5 0.789 - - - - - 0.789 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
58. ENSGALG00000028531 ENSGALG00000028531 2 0.789 - - - - - 0.789 - - - -
59. TP63 ENSGALG00000007324 6 0.789 - - - - - 0.789 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
60. NOXO1 ENSGALG00000005572 14 0.789 - - - - - 0.789 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
61. TRH ENSGALG00000008490 16 0.789 - - - - - 0.789 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
62. ST7L ENSGALG00000001538 5 0.789 - - - - - 0.789 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
63. TSSK3 4 0.789 - - - - - 0.789 - - - - testis specific serine kinase 3
64. SLC26A11 ENSGALG00000007018 7 0.789 - - - - - 0.789 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
65. TOX3 ENSGALG00000034649 54 0.789 - - - - - 0.789 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
66. ENSGALG00000020349 ENSGALG00000020349 10 0.789 - - - - - 0.789 - - - -
67. TMEM8C ENSGALG00000021520 30 0.789 - - - - - 0.789 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
68. OSTN ENSGALG00000007226 33 0.789 - - - - - 0.789 - - - - osteocrin [Source:NCBI gene;Acc:424907]
69. DIET1 DIET1 1 0.789 - - - - - 0.789 - - - -
70. BANK1 ENSGALG00000012292 17 0.789 - - - - - 0.789 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
71. BACE1 ENSGALG00000007298 3 0.789 - - - - - 0.789 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
72. STK35 ENSGALG00000036219 0 0.789 - - - - - 0.789 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
73. LOC100858814 ENSGALG00000028210 3 0.789 - - - - - 0.789 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
74. ATP7B ENSGALG00000017021 7 0.789 - - - - - 0.789 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
75. HMX2 ENSGALG00000030875 10 0.789 - - - - - 0.789 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
76. ENSGALG00000015321 ENSGALG00000015321 18 0.789 - - - - - 0.789 - - - -
77. TTC34 ENSGALG00000001081 8 0.789 - - - - - 0.789 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
78. SLCO4C1 ENSGALG00000026768 30 0.789 - - - - - 0.789 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
79. COTL1 ENSGALG00000017644 81 0.789 - - - - - 0.789 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
80. DMP1 ENSGALG00000010927 5 0.789 - - - - - 0.789 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
81. gga-let-7i ENSGALG00000018237 2 0.789 - - - - - 0.789 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
82. KCNC1 ENSGALG00000006220 15 0.789 - - - - - 0.789 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
83. PPFIA2 ENSGALG00000010958 27 0.789 - - - - - 0.789 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
84. GRID2 ENSGALG00000010397 6 0.786 - - - - - - - - - 0.786 glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
85. FHDC1 ENSGALG00000041054 34 0.786 - - - - - 0.786 - - - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
86. GNRH1 9 0.784 - - - - 0.784 - - - - - gonadotropin releasing hormone 1
87. NAT8L ENSGALG00000032113 137 0.784 - - - - - 0.784 - - - - N-acetyltransferase 8 like [Source:HGNC Symbol;Acc:HGNC:26742]
88. RCOR1 ENSGALG00000011384 22 0.779 - - - - - 0.779 - - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
89. VWA1 ENSGALG00000001527 79 0.779 - - - - - - 0.779 - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
90. TSPAN18 ENSGALG00000036901 14 0.776 - - - - - 0.776 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
91. ANKRD31 46 0.774 - - - - - 0.774 - - - - ankyrin repeat domain 31, transcript variant X2
92. SPHKAP ENSGALG00000002974 80 0.771 - - - - - 0.771 - - - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
93. RGS3 ENSGALG00000008881 3399 0.77 - - - - - - - - - 0.770 regulator of G protein signaling 3 [Source:NCBI gene;Acc:395110]
94. ZHX3 ENSGALG00000039155 5 0.768 - - - - 0.768 - - - - - zinc fingers and homeoboxes 3 [Source:HGNC Symbol;Acc:HGNC:15935]
95. EDRF1 26 0.768 - - - - 0.768 - - - - - erythroid differentiation regulatory factor 1
96. EPHB6 ENSGALG00000014749 30 0.768 - - - - - - - - - 0.768 EPH receptor B6 [Source:NCBI gene;Acc:418308]
97. YES1 ENSGALG00000014860 31 0.767 - - - - - - 0.767 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
98. KLHDC8B ENSGALG00000006776 76 0.766 - - - - - 0.766 - - - - kelch domain containing 8B [Source:HGNC Symbol;Acc:HGNC:28557]
99. CDH7 ENSGALG00000013782 11 0.766 - - - - - - - - - 0.766 cadherin 7 [Source:NCBI gene;Acc:374007]
100. HS3ST5 ENSGALG00000026594 44 0.763 - - - - - - - - - 0.763 heparan sulfate-glucosamine 3-sulfotransferase 5 [Source:HGNC Symbol;Acc:HGNC:19419]

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA