Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SAFB

Gene Name Gene ID Reads Annotation
SAFB ENSGALG00000013365 3175 scaffold attachment factor B, transcript variant X1











Genes with expression patterns similar to SAFB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SAFB ENSGALG00000013365 3175 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 scaffold attachment factor B, transcript variant X1
2. TRIP13 ENSGALG00000033834 6590 1.565 - - - - - - - 0.837 0.728 - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
3. SENP2 ENSGALG00000031128 1162 1.542 - - - - - - 0.755 - 0.787 - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
4. GOLGA2 ENSGALG00000004881 677 1 - - - - - - - 1.000 - - golgin A2, transcript variant X7
5. MBTPS1 ENSGALG00000003293 4843 1 - - - - - - - 1.000 - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
6. LARP1B ENSGALG00000010207 2935 1 - - - - - - - 1.000 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
7. RPTOR ENSGALG00000034210 982 1 - - - - - - - 1.000 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
8. EXTL3 ENSGALG00000016630 1916 1 - - - - - - - 1.000 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
9. DISP1 3281 0.999 - - - - - - - 0.999 - - dispatched RND transporter family member 1, transcript variant X3
10. ORC2 ENSGALG00000008234 3361 0.999 - - - - - - - 0.999 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
11. ENGASE ENSGALG00000011816 1763 0.999 - - - - - - - 0.999 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
12. LSM1 ENSGALG00000003245 4701 0.999 - - - - - - - 0.999 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
13. Sep-11 Sep-11 2005 0.999 - - - - - - - 0.999 - -
14. DDX55 ENSGALG00000003298 2315 0.999 - - - - - - - 0.999 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
15. ADAM9 ENSGALG00000003398 1299 0.999 - - - - - - - 0.999 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
16. PRMT7 ENSGALG00000038865 2666 0.999 - - - - - - - 0.999 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
17. MTMR6 ENSGALG00000017112 2214 0.999 - - - - - - - 0.999 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
18. GPR89 GPR89 2253 0.999 - - - - - - - 0.999 - -
19. NOP14 ENSGALG00000015649 7039 0.998 - - - - - - - 0.998 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
20. PSMG1 ENSGALG00000016062 7511 0.998 - - - - - - - 0.998 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
21. TBC1D12 ENSGALG00000034044 5588 0.998 - - - - - - - 0.998 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
22. BAG2 ENSGALG00000026605 3898 0.997 - - - - - - - 0.997 - - BCL2 associated athanogene 2
23. CASC4 ENSGALG00000008208 8338 0.997 - - - - - - - 0.997 - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
24. JMJD1C ENSGALG00000002942 4556 0.997 - - - - - - - 0.997 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
25. FBXO5 ENSGALG00000013607 6156 0.997 - - - - - - - 0.997 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
26. PSMD5 ENSGALG00000001637 6812 0.996 - - - - - - - 0.996 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
27. HIGD2A ENSGALG00000003348 34109 0.996 - - - - - - - 0.996 - - HIG1 hypoxia inducible domain family member 2A
28. CTPS1 ENSGALG00000042967 9532 0.995 - - - - - - - 0.995 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
29. TNRC18 ENSGALG00000040770 4061 0.995 - - - - - - - 0.995 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
30. CCNYL1 ENSGALG00000008485 11958 0.992 - - - - - - - 0.992 - - cyclin Y like 1
31. KDM2B ENSGALG00000004225 11513 0.991 - - - - - - - 0.991 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
32. ESF1 ENSGALG00000034768 8610 0.991 - - - - - - - 0.991 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
33. NUDC ENSGALG00000000895 17844 0.99 - - - - - - - 0.990 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
34. PARP16 ENSGALG00000007365 9467 0.985 - - - - - - - 0.985 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
35. ACO1 ENSGALG00000002162 6645 0.985 - - - - - - - 0.985 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
36. DAK DAK 13208 0.984 - - - - - - - 0.984 - -
37. MCM5 ENSGALG00000012546 18254 0.972 - - - - - - - 0.972 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
38. CDH5 ENSGALG00000032349 8526 0.965 - - - - - - - 0.965 - - cadherin 5 [Source:NCBI gene;Acc:374068]
39. CTNND2 ENSGALG00000013001 11217 0.964 - - - - - - - 0.964 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
40. DTD1 ENSGALG00000008808 10807 0.956 - - - - - - - 0.956 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
41. SRSF6 ENSGALG00000000990 12424 0.947 - - - - - - - 0.947 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
42. TTC4 10377 0.946 - - - - - - - 0.946 - - tetratricopeptide repeat domain 4
43. THOC5 ENSGALG00000029223 16069 0.943 - - - - - - - 0.943 - - THO complex 5 [Source:NCBI gene;Acc:417019]
44. FKBP9 ENSGALG00000037669 12079 0.941 - - - - - - - 0.941 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
45. SKP2 ENSGALG00000003547 14637 0.938 - - - - - - - 0.938 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
46. EIF2B1 ENSGALG00000003259 9491 0.938 - - - - - - - 0.938 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
47. TAF3 ENSGALG00000006731 15569 0.937 - - - - - - - 0.937 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
48. BCCIP ENSGALG00000006617 13291 0.936 - - - - - - - 0.936 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
49. ATP1A1 ENSGALG00000032247 15898 0.933 - - - - - - - 0.933 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
50. SH3BGRL3 ENSGALG00000038536 18187 0.928 - - - - - - - 0.928 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
51. PARL ENSGALG00000002315 15943 0.926 - - - - - - - 0.926 - - presenilin associated rhomboid like
52. LSM7 ENSGALG00000000408 19112 0.922 - - - - - - - 0.922 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
53. TM9SF3 ENSGALG00000005534 15290 0.92 - - - - - - - 0.920 - - transmembrane 9 superfamily member 3
54. HDAC2 ENSGALG00000014991 23458 0.907 - - - - - - - 0.907 - - histone deacetylase 2 [Source:NCBI gene;Acc:395635]
55. SPARC ENSGALG00000004184 36410 0.907 - - - - - - - 0.907 - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
56. COPS5 ENSGALG00000030843 11942 0.9 - - - - - - - 0.900 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
57. MPHOSPH10 ENSGALG00000003906 7029 0.893 - - - - - - - 0.893 - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
58. RNF7 ENSGALG00000021117 13110 0.887 - - - - - - - 0.887 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
59. SLC25A30 ENSGALG00000016979 2625 0.873 - - - - - - - 0.873 - - solute carrier family 25 member 30 [Source:HGNC Symbol;Acc:HGNC:27371]
60. HNRNPH3 ENSGALG00000003947 28724 0.865 - - - - - - - 0.865 - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
61. FAF2 ENSGALG00000003331 4776 0.864 - - - - - - - 0.864 - - Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
62. METRNL ENSGALG00000028354 25565 0.861 - - - - - - - 0.861 - - meteorin like, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:27584]
63. TRAM1 ENSGALG00000041112 22876 0.858 - - - - - - - 0.858 - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
64. LAP3 ENSGALG00000006334 21076 0.857 - - - - - - - 0.857 - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
65. GMPPA ENSGALG00000002417 10383 0.857 - - - - - - - 0.857 - - GDP-mannose pyrophosphorylase A, transcript variant X2
66. C2orf47 C2orf47 17769 0.856 - - - - - - - 0.856 - -
67. C1orf174 ENSGALG00000000975 4947 0.846 - - - - - - - 0.846 - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
68. C4H4ORF52 C4H4ORF52 8116 0.844 - - - - - - - 0.844 - -
69. PGRMC1 ENSGALG00000020260 19059 0.844 - - - - - - - 0.844 - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
70. TMEM115 ENSGALG00000026965 13050 0.843 - - - - - - - 0.843 - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
71. CTSO ENSGALG00000009373 4186 0.841 - - - - - - - 0.841 - - cathepsin O [Source:NCBI gene;Acc:422410]
72. CHD2 ENSGALG00000006949 1076 0.834 - - - - - - - - 0.834 - chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
73. RRP1B ENSGALG00000035696 12309 0.829 - - - - - - - - 0.829 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
74. LSM6 ENSGALG00000009985 18582 0.825 - - - - - - - 0.825 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
75. XPOT ENSGALG00000009835 2953 0.823 - - - - - - - - 0.823 - exportin for tRNA [Source:NCBI gene;Acc:417824]
76. GALM ENSGALG00000013828 1546 0.822 - - - - - - - - 0.822 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
77. GOLGA7 ENSGALG00000003483 26525 0.821 - - - - - - - 0.821 - - golgin A7 [Source:NCBI gene;Acc:426787]
78. PDXDC1 ENSGALG00000034829 406 0.818 - - - - - - - - 0.818 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
79. RUFY2 1442 0.818 - - - - - - - - 0.818 - RUN and FYVE domain containing 2, transcript variant X1
80. PRDM15 ENSGALG00000019178 2729 0.816 - - - - - - - - 0.816 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
81. ODZ2 ODZ2 1380 0.815 - - - - - - - - 0.815 -
82. PCLO 249 0.814 - - - - - - - - 0.814 - piccolo presynaptic cytomatrix protein
83. ZC3H14 ENSGALG00000010622 7024 0.814 - - - - - - - 0.814 - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
84. ALMS1 ENSGALG00000044620 570 0.813 - - - - - - - - 0.813 - ALMS1, centrosome and basal body associated protein, transcript variant X1
85. CEP97 ENSGALG00000015342 1117 0.813 - - - - - - - - 0.813 - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
86. RBBP8 ENSGALG00000014982 3255 0.812 - - - - - - - - 0.812 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
87. MDN1 ENSGALG00000015733 2352 0.812 - - - - - - - - 0.812 - midasin AAA ATPase 1, transcript variant X1
88. LHCGR ENSGALG00000009095 174 0.811 - - - - - - - - 0.811 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
89. SNCAIP ENSGALG00000005330 2425 0.811 - - - - - - - - 0.811 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
90. MRPL17 ENSGALG00000002605 46508 0.808 - - - - - - - 0.808 - - mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:HGNC:14053]
91. PLSCR1 ENSGALG00000006805 1220 0.808 - - - - - - - - 0.808 - phospholipid scramblase 1 [Source:HGNC Symbol;Acc:HGNC:9092]
92. ATP6V0A1 ENSGALG00000003256 4408 0.807 - - - - - - - - 0.807 - ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
93. KLHL15 ENSGALG00000016345 1638 0.805 - - - - - - - - 0.805 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
94. AKAP7 ENSGALG00000029794 3287 0.805 - - - - - - - 0.805 - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
95. ZDHHC7 ENSGALG00000042522 1774 0.802 - - - - - - - - 0.802 - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
96. TMEM269 ENSGALG00000025800 143 0.802 - - - - - - - - 0.802 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
97. DTX3L ENSGALG00000012075 399 0.8 - - - - - - - - 0.800 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
98. KIAA1217 ENSGALG00000007766 144 0.8 - - - - - - - - 0.800 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
99. LRRC59 ENSGALG00000007673 2081 0.799 - - - - - - - - 0.799 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
100. SLC22A23 ENSGALG00000012816 946 0.799 - - - - - - - - 0.799 - solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106]

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA