Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rtn3

Gene Name Gene ID Reads Annotation
Rtn3 ENSMUSG00000024758 11055 reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]







Genes with expression patterns similar to Rtn3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rtn3 ENSMUSG00000024758 11055 6 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
2. Vta1 ENSMUSG00000019868 1987 2.534 0.773 0.894 - - - 0.867 vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]
3. Zfand5 ENSMUSG00000024750 6972 2.414 - 0.883 - - 0.720 0.811 zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
4. Zc3h7a ENSMUSG00000037965 1775 1.715 - 0.856 - - - 0.859 zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
5. Rnf31 ENSMUSG00000047098 530 1.706 - 0.847 - - - 0.859 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
6. Dnm2 ENSMUSG00000033335 1247 1.699 - 0.864 - - - 0.835 dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
7. Wbp1 ENSMUSG00000030035 3480 1.691 - 0.843 - - - 0.848 WW domain binding protein 1 [Source:MGI Symbol;Acc:MGI:104710]
8. Mon2 ENSMUSG00000034602 2162 1.675 - 0.854 - - - 0.821 MON2 homolog, regulator of endosome to Golgi trafficking [Source:MGI Symbol;Acc:MGI:1914324]
9. Fut8 ENSMUSG00000021065 1066 1.632 - - - - 0.809 0.823 fucosyltransferase 8 [Source:MGI Symbol;Acc:MGI:1858901]
10. Fgd4 ENSMUSG00000022788 6160 1.62 - - - - 0.740 0.880 FYVE, RhoGEF and PH domain containing 4 [Source:MGI Symbol;Acc:MGI:2183747]
11. 2700029M09Rik 2700029M09Rik 1474 1.61 - - - - 0.744 0.866
12. Rpl35a ENSMUSG00000060636 411 1.601 - 0.857 - - 0.744 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
13. Nemf ENSMUSG00000020982 2930 1.6 - 0.780 - - - 0.820 nuclear export mediator factor [Source:MGI Symbol;Acc:MGI:1918305]
14. Dhx9 ENSMUSG00000042699 8779 1.582 0.843 - - - - 0.739 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
15. Tma7 ENSMUSG00000091537 17398 1.572 - 0.761 - - - 0.811 translational machinery associated 7 [Source:MGI Symbol;Acc:MGI:1913417]
16. Soga3 ENSMUSG00000038916 3972 1.567 - - - 0.701 - 0.866 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
17. Rpn1 ENSMUSG00000030062 7082 1.562 - 0.801 - - - 0.761 ribophorin I [Source:MGI Symbol;Acc:MGI:98084]
18. Cdc25c ENSMUSG00000044201 1273 1.558 - - - - 0.701 0.857 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
19. Bcs1l ENSMUSG00000026172 2289 1.553 0.811 - - - 0.742 - BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
20. Zfp532 ENSMUSG00000042439 6834 1.544 - 0.755 - - - 0.789 zinc finger protein 532 [Source:MGI Symbol;Acc:MGI:3036282]
21. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 1.506 - - 0.706 - 0.800 - dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
22. Mycl ENSMUSG00000028654 904 1.505 - - 0.717 - 0.788 - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
23. Miat ENSMUSG00000097767 4258 1.493 - - 0.714 - 0.779 - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
24. Fam84b ENSMUSG00000072568 1349 1.45 - 0.711 - - 0.739 - family with sequence similarity 84, member B [Source:MGI Symbol;Acc:MGI:3026924]
25. Rasa1 ENSMUSG00000021549 3402 1.434 - 0.731 - - 0.703 - RAS p21 protein activator 1 [Source:MGI Symbol;Acc:MGI:97860]
26. Map1b ENSMUSG00000052727 28977 1.415 - - 0.707 - 0.708 - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
27. Map6 ENSMUSG00000055407 476 0.913 - - - - - 0.913 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
28. Arf2 ENSMUSG00000062421 4459 0.91 - - - - - 0.910 ADP-ribosylation factor 2 [Source:MGI Symbol;Acc:MGI:99595]
29. Chd7 ENSMUSG00000041235 7625 0.909 - - - - - 0.909 chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
30. Spag9 ENSMUSG00000020859 2554 0.906 - 0.906 - - - - sperm associated antigen 9 [Source:MGI Symbol;Acc:MGI:1918084]
31. Idh1 ENSMUSG00000025950 6534 0.906 - - - - - 0.906 isocitrate dehydrogenase 1 (NADP+), soluble [Source:MGI Symbol;Acc:MGI:96413]
32. Plk3 ENSMUSG00000028680 442 0.899 - - - - - 0.899 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
33. Slco5a1 ENSMUSG00000025938 586 0.898 - - - - - 0.898 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
34. Ndrg4 ENSMUSG00000036564 629 0.897 - - - - - 0.897 N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
35. 1110001J03Rik 2404 0.892 - 0.892 - - - - RIKEN cDNA 1110001J03 gene
36. Sucla2 ENSMUSG00000022110 2990 0.891 - 0.891 - - - - succinate-Coenzyme A ligase, ADP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306775]
37. Srp14 ENSMUSG00000009549 11586 0.89 - 0.890 - - - - signal recognition particle 14 [Source:MGI Symbol;Acc:MGI:107169]
38. Pabpc4 ENSMUSG00000011257 4240 0.89 - 0.890 - - - - poly(A) binding protein, cytoplasmic 4 [Source:MGI Symbol;Acc:MGI:2385206]
39. Nudt5 ENSMUSG00000025817 4257 0.888 - 0.888 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:MGI Symbol;Acc:MGI:1858232]
40. Mcm4 ENSMUSG00000022673 5170 0.887 - 0.887 - - - - minichromosome maintenance complex component 4 [Source:MGI Symbol;Acc:MGI:103199]
41. Psma6 ENSMUSG00000021024 3072 0.887 - 0.887 - - - - proteasome (prosome, macropain) subunit, alpha type 6 [Source:MGI Symbol;Acc:MGI:1347006]
42. Ppp6r3 ENSMUSG00000024908 4031 0.887 - 0.887 - - - - protein phosphatase 6, regulatory subunit 3 [Source:MGI Symbol;Acc:MGI:1921807]
43. Cnih4 ENSMUSG00000062169 2354 0.886 - 0.886 - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:MGI Symbol;Acc:MGI:1925828]
44. Vdac3 ENSMUSG00000008892 2602 0.884 - 0.884 - - - - voltage-dependent anion channel 3 [Source:MGI Symbol;Acc:MGI:106922]
45. Mfng ENSMUSG00000018169 425 0.883 - - - - - 0.883 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
46. Sms ENSMUSG00000071708 2311 0.882 - - - - - 0.882 spermine synthase [Source:MGI Symbol;Acc:MGI:109490]
47. Eif3i ENSMUSG00000028798 5912 0.882 - - - - - 0.882 eukaryotic translation initiation factor 3, subunit I [Source:MGI Symbol;Acc:MGI:1860763]
48. Msantd3 ENSMUSG00000039693 1503 0.882 - 0.882 - - - - Myb/SANT-like DNA-binding domain containing 3 [Source:MGI Symbol;Acc:MGI:1913915]
49. Cdh2 ENSMUSG00000024304 2594 0.882 - 0.882 - - - - cadherin 2 [Source:MGI Symbol;Acc:MGI:88355]
50. Fryl ENSMUSG00000070733 1717 0.881 - - - - - 0.881 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
51. Prtg ENSMUSG00000036030 3403 0.88 - 0.880 - - - - protogenin [Source:MGI Symbol;Acc:MGI:2444710]
52. Mdm1 ENSMUSG00000020212 835 0.88 - - - - - 0.880 transformed mouse 3T3 cell double minute 1 [Source:MGI Symbol;Acc:MGI:96951]
53. Tmed2 ENSMUSG00000029390 7156 0.88 - 0.880 - - - - transmembrane p24 trafficking protein 2 [Source:MGI Symbol;Acc:MGI:1929269]
54. Bcl7b ENSMUSG00000029681 996 0.879 - - - - - 0.879 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
55. Ccdc104 Ccdc104 1111 0.879 - - - - - 0.879
56. Nsg2 ENSMUSG00000020297 1718 0.879 - 0.879 - - - - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
57. Kcnh2 ENSMUSG00000038319 806 0.877 - - - - - 0.877 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
58. Rpl27a ENSMUSG00000046364 2278 0.877 - 0.877 - - - - ribosomal protein L27A [Source:MGI Symbol;Acc:MGI:1347076]
59. Bbs2 ENSMUSG00000031755 976 0.877 - - - - - 0.877 Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
60. Zfp131 ENSMUSG00000094870 3397 0.877 - - - - - 0.877 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
61. Prpf3 ENSMUSG00000015748 1936 0.877 - 0.877 - - - - pre-mRNA processing factor 3 [Source:MGI Symbol;Acc:MGI:1918017]
62. Gm20469 Gm20469 2886 0.876 - 0.876 - - - -
63. Sox21 ENSMUSG00000061517 464 0.876 - - - - 0.876 - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
64. Med1 ENSMUSG00000018160 2865 0.876 - 0.876 - - - - mediator complex subunit 1 [Source:MGI Symbol;Acc:MGI:1100846]
65. Snhg11 ENSMUSG00000044349 1353 0.875 - - - - - 0.875 small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
66. Timm50 ENSMUSG00000003438 2037 0.875 - - - - - 0.875 translocase of inner mitochondrial membrane 50 [Source:MGI Symbol;Acc:MGI:1913775]
67. Pnrc2 ENSMUSG00000028675 6182 0.875 - - - - - 0.875 proline-rich nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:106512]
68. Rragd ENSMUSG00000028278 762 0.874 - - - - - 0.874 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
69. Agpat5 ENSMUSG00000031467 2212 0.874 - - - - - 0.874 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) [Source:MGI Symbol;Acc:MGI:1196345]
70. Creb1 ENSMUSG00000025958 4907 0.873 - 0.873 - - - - cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
71. Gnptg ENSMUSG00000035521 519 0.872 - - - - - 0.872 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
72. Acyp1 ENSMUSG00000008822 1101 0.872 - - - - - 0.872 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
73. Snapin ENSMUSG00000001018 1886 0.871 - - - - - 0.871 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
74. Supt4a ENSMUSG00000020485 3703 0.871 - - - - - 0.871 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
75. Coq10a ENSMUSG00000039914 324 0.871 - - - - - 0.871 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
76. Dnajc21 ENSMUSG00000044224 1073 0.871 - - - - - 0.871 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
77. Xk ENSMUSG00000015342 218 0.87 - - - - - 0.870 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
78. Prkar2a ENSMUSG00000032601 1406 0.87 - - - - - 0.870 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
79. Zw10 ENSMUSG00000032264 1164 0.87 - - - - - 0.870 zw10 kinetochore protein [Source:MGI Symbol;Acc:MGI:1349478]
80. Sh3pxd2b ENSMUSG00000040711 2383 0.87 - 0.870 - - - - SH3 and PX domains 2B [Source:MGI Symbol;Acc:MGI:2442062]
81. Fbxl6 ENSMUSG00000022559 1084 0.87 - - - - - 0.870 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
82. Pole2 ENSMUSG00000020974 1305 0.869 - 0.869 - - - - polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
83. Snrpg ENSMUSG00000057278 5065 0.869 - 0.869 - - - - small nuclear ribonucleoprotein polypeptide G [Source:MGI Symbol;Acc:MGI:1915261]
84. Gnb2 ENSMUSG00000029713 2747 0.869 - 0.869 - - - - guanine nucleotide binding protein (G protein), beta 2 [Source:MGI Symbol;Acc:MGI:95784]
85. Pttg1 ENSMUSG00000020415 3133 0.869 - 0.869 - - - - pituitary tumor-transforming gene 1 [Source:MGI Symbol;Acc:MGI:1353578]
86. Csnk1g3 ENSMUSG00000073563 4431 0.869 - 0.869 - - - - casein kinase 1, gamma 3 [Source:MGI Symbol;Acc:MGI:1917675]
87. Rbm12b1 ENSMUSG00000046667 331 0.869 - - - - - 0.869 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
88. Ubap1 ENSMUSG00000028437 2702 0.869 - - - - - 0.869 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
89. Syvn1 ENSMUSG00000024807 910 0.868 - - - - - 0.868 synovial apoptosis inhibitor 1, synoviolin [Source:MGI Symbol;Acc:MGI:1921376]
90. Sec23a ENSMUSG00000020986 2929 0.868 - 0.868 - - - - SEC23 homolog A, COPII coat complex component [Source:MGI Symbol;Acc:MGI:1349635]
91. Gm15966 ENSMUSG00000085865 150 0.868 - - - - - 0.868 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
92. Usp42 ENSMUSG00000051306 1252 0.868 - - - - - 0.868 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
93. Slc2a1 ENSMUSG00000028645 2094 0.868 - 0.868 - - - - solute carrier family 2 (facilitated glucose transporter), member 1 [Source:MGI Symbol;Acc:MGI:95755]
94. Letm1 ENSMUSG00000005299 1677 0.867 - 0.867 - - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1932557]
95. Ccdc68 ENSMUSG00000038903 129 0.867 - - - - - 0.867 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
96. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.867 - - - - - 0.867 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
97. Cdk5r1 ENSMUSG00000048895 2376 0.867 - 0.867 - - - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
98. Vkorc1l1 ENSMUSG00000066735 1190 0.867 - - - - - 0.867 vitamin K epoxide reductase complex, subunit 1-like 1 [Source:MGI Symbol;Acc:MGI:1916818]
99. Mtmr10 ENSMUSG00000030522 476 0.867 - - - - - 0.867 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
100. 4632415L05Rik ENSMUSG00000048106 222 0.867 - - - - - 0.867 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]

There are 677 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA