Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rtl1

Gene Name Gene ID Reads Annotation
Rtl1 ENSMUSG00000085925, ENSMUSG00000098639 15 retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]







Genes with expression patterns similar to Rtl1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rtl1 ENSMUSG00000085925, ENSMUSG00000098639 15 6 1.000 1.000 1.000 1.000 1.000 1.000 retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]
2. Gm16028 ENSMUSG00000090252 4 1.819 - - 0.949 0.870 - - predicted gene 16028 [Source:MGI Symbol;Acc:MGI:3801982]
3. Gm13398 ENSMUSG00000087364 26 1.701 - 0.895 0.806 - - - predicted gene 13398 [Source:MGI Symbol;Acc:MGI:3652315]
4. Serpind1 ENSMUSG00000022766 52 1.699 0.759 - 0.940 - - - serine (or cysteine) peptidase inhibitor, clade D, member 1 [Source:MGI Symbol;Acc:MGI:96051]
5. Ccdc81 ENSMUSG00000039391 4 1.642 0.703 - 0.939 - - - coiled-coil domain containing 81 [Source:MGI Symbol;Acc:MGI:1918134]
6. Gpr179 ENSMUSG00000070337 20 1.62 0.703 - 0.917 - - - G protein-coupled receptor 179 [Source:MGI Symbol;Acc:MGI:2443409]
7. Gm16759 ENSMUSG00000086539 3 1.586 - 0.716 - 0.870 - - predicted gene, 16759 [Source:MGI Symbol;Acc:MGI:4439683]
8. P2ry4 ENSMUSG00000044359 3 1 - - - 1.000 - - pyrimidinergic receptor P2Y, G-protein coupled, 4 [Source:MGI Symbol;Acc:MGI:1926594]
9. 4930426L09Rik ENSMUSG00000026736 4 0.956 - - 0.956 - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
10. Gm14696 ENSMUSG00000087369 10 0.951 - - 0.951 - - - predicted gene 14696 [Source:MGI Symbol;Acc:MGI:3705257]
11. 6430550D23Rik ENSMUSG00000074646 32 0.95 - - 0.950 - - - RIKEN cDNA 6430550D23 gene [Source:MGI Symbol;Acc:MGI:2443361]
12. Krtap5-4 ENSMUSG00000045236 2 0.949 - - 0.949 - - - keratin associated protein 5-4 [Source:MGI Symbol;Acc:MGI:1354758]
13. Crygd ENSMUSG00000067299 3 0.949 - - 0.949 - - - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
14. Cyp2c70 ENSMUSG00000060613 3 0.949 - - 0.949 - - - cytochrome P450, family 2, subfamily c, polypeptide 70 [Source:MGI Symbol;Acc:MGI:2385878]
15. C3 ENSMUSG00000024164 24 0.949 - - 0.949 - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
16. Alb ENSMUSG00000029368 370 0.949 - - 0.949 - - - albumin [Source:MGI Symbol;Acc:MGI:87991]
17. Gm14947 ENSMUSG00000086452 16 0.949 - - 0.949 - - - predicted gene 14947 [Source:MGI Symbol;Acc:MGI:3642731]
18. Gm6169 ENSMUSG00000057762 16 0.949 - - 0.949 - - - predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
19. Mesp1 ENSMUSG00000030544 3 0.949 - - 0.949 - - - mesoderm posterior 1 [Source:MGI Symbol;Acc:MGI:107785]
20. Gm16542 Gm16542 2 0.949 - - 0.949 - - -
21. Olfr1505 ENSMUSG00000062314 2 0.949 - - 0.949 - - - olfactory receptor 1505 [Source:MGI Symbol;Acc:MGI:3031339]
22. Fam46d 4 0.949 - - 0.949 - - - family with sequence similarity 46, member D, transcript variant X1
23. Cd300ld ENSMUSG00000034641 6 0.947 - - 0.947 - - - CD300 molecule like family member d [Source:MGI Symbol;Acc:MGI:2442358]
24. Gys2 ENSMUSG00000030244 18 0.946 - - 0.946 - - - glycogen synthase 2 [Source:MGI Symbol;Acc:MGI:2385254]
25. Afp ENSMUSG00000054932 3253 0.946 - - 0.946 - - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
26. Spire2 ENSMUSG00000010154 178 0.944 - - 0.944 - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
27. Apoc2 ENSMUSG00000002992 36 0.942 - - 0.942 - - - apolipoprotein C-II [Source:MGI Symbol;Acc:MGI:88054]
28. Dmkn ENSMUSG00000060962 5 0.941 - - 0.941 - - - dermokine [Source:MGI Symbol;Acc:MGI:1920962]
29. 2900055J20Rik ENSMUSG00000071860 21 0.941 - - 0.941 - - - RIKEN cDNA 2900055J20 gene [Source:MGI Symbol;Acc:MGI:1920251]
30. Gm12591 ENSMUSG00000082831 8 0.94 - - 0.940 - - - predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
31. Gm13236 ENSMUSG00000087513 9 0.939 - - 0.939 - - - predicted gene 13236 [Source:MGI Symbol;Acc:MGI:3705163]
32. Sprr2f ENSMUSG00000050635 4 0.939 - - 0.939 - - - small proline-rich protein 2F [Source:MGI Symbol;Acc:MGI:1330349]
33. Gm10463 ENSMUSG00000102759 12 0.937 - - 0.937 - - - predicted gene 10463 [Source:MGI Symbol;Acc:MGI:3642170]
34. Fbxl8 ENSMUSG00000033313 40 0.935 - - 0.935 - - - F-box and leucine-rich repeat protein 8 [Source:MGI Symbol;Acc:MGI:1354697]
35. Cd200r3 ENSMUSG00000036172 13 0.933 - - 0.933 - - - CD200 receptor 3 [Source:MGI Symbol;Acc:MGI:1921853]
36. Gm6787 ENSMUSG00000086404 13 0.932 - - 0.932 - - - predicted gene 6787 [Source:MGI Symbol;Acc:MGI:3646481]
37. Zfp853 ENSMUSG00000093910 3 0.932 - - 0.932 - - - zinc finger protein 853 [Source:MGI Symbol;Acc:MGI:2685638]
38. Acaa1b ENSMUSG00000010651 3 0.931 - - 0.931 - - - acetyl-Coenzyme A acyltransferase 1B [Source:MGI Symbol;Acc:MGI:3605455]
39. Zfp354b ENSMUSG00000020335 56 0.929 - - 0.929 - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
40. Gmnc ENSMUSG00000068428 7 0.927 - - 0.927 - - - geminin coiled-coil domain containing [Source:MGI Symbol;Acc:MGI:2685452]
41. Fbxl7 ENSMUSG00000043556 38 0.926 - - 0.926 - - - F-box and leucine-rich repeat protein 7 [Source:MGI Symbol;Acc:MGI:3052506]
42. Gm6097 Gm6097 3 0.925 - - 0.925 - - -
43. Klb ENSMUSG00000029195 3 0.924 - - 0.924 - - - klotho beta [Source:MGI Symbol;Acc:MGI:1932466]
44. Trpc4 ENSMUSG00000027748 105 0.924 - - 0.924 - - - transient receptor potential cation channel, subfamily C, member 4 [Source:MGI Symbol;Acc:MGI:109525]
45. Rnf207 ENSMUSG00000058498 72 0.922 - - 0.922 - - - ring finger protein 207 [Source:MGI Symbol;Acc:MGI:2684989]
46. Col17a1 ENSMUSG00000025064 11 0.921 - - 0.921 - - - collagen, type XVII, alpha 1 [Source:MGI Symbol;Acc:MGI:88450]
47. Gm26862 ENSMUSG00000097644 5 0.918 - - 0.918 - - - predicted gene, 26862 [Source:MGI Symbol;Acc:MGI:5477356]
48. Gp9 ENSMUSG00000030054 23 0.918 - 0.918 - - - - glycoprotein 9 (platelet) [Source:MGI Symbol;Acc:MGI:1860137]
49. Cybrd1 ENSMUSG00000027015 70 0.915 - - 0.915 - - - cytochrome b reductase 1 [Source:MGI Symbol;Acc:MGI:2654575]
50. Dnah8 ENSMUSG00000033826 7 0.912 - - 0.912 - - - dynein, axonemal, heavy chain 8 [Source:MGI Symbol;Acc:MGI:107714]
51. Eomes ENSMUSG00000032446 9 0.911 - - 0.911 - - - eomesodermin [Source:MGI Symbol;Acc:MGI:1201683]
52. Gm684 50 0.911 - - 0.911 - - - predicted gene 684, transcript variant X5
53. Irs3 ENSMUSG00000047182 11 0.908 - - 0.908 - - - insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
54. Gm26947 ENSMUSG00000098055 11 0.907 - - 0.907 - - - predicted gene, 26947 [Source:MGI Symbol;Acc:MGI:5504062]
55. Gm26772 ENSMUSG00000097136 28 0.904 - - 0.904 - - - predicted gene, 26772 [Source:MGI Symbol;Acc:MGI:5477266]
56. Hpdl ENSMUSG00000043155 15 0.903 - - 0.903 - - - 4-hydroxyphenylpyruvate dioxygenase-like [Source:MGI Symbol;Acc:MGI:2444646]
57. Gm26538 ENSMUSG00000097507 20 0.902 - - 0.902 - - - predicted gene, 26538 [Source:MGI Symbol;Acc:MGI:5477032]
58. Sybu ENSMUSG00000022340 26 0.901 - - 0.901 - - - syntabulin (syntaxin-interacting) [Source:MGI Symbol;Acc:MGI:2442392]
59. Ms4a6d ENSMUSG00000024679 33 0.897 - 0.897 - - - - membrane-spanning 4-domains, subfamily A, member 6D [Source:MGI Symbol;Acc:MGI:1916024]
60. Rtp4 ENSMUSG00000033355 31 0.897 - - 0.897 - - - receptor transporter protein 4 [Source:MGI Symbol;Acc:MGI:1915025]
61. Gm12712 ENSMUSG00000081675 6 0.895 - 0.895 - - - - predicted gene 12712 [Source:MGI Symbol;Acc:MGI:3649929]
62. Gm5518 ENSMUSG00000068466 9 0.895 - 0.895 - - - - predicted gene 5518 [Source:MGI Symbol;Acc:MGI:3648673]
63. Spcs2-ps ENSMUSG00000081888 7 0.895 - 0.895 - - - - signal peptidase complex subunit 2, pseudogene [Source:MGI Symbol;Acc:MGI:3650451]
64. 4931428F04Rik ENSMUSG00000014837 16 0.895 - 0.895 - - - - RIKEN cDNA 4931428F04 gene [Source:MGI Symbol;Acc:MGI:1921606]
65. Gpr26 ENSMUSG00000040125 3 0.895 - 0.895 - - - - G protein-coupled receptor 26 [Source:MGI Symbol;Acc:MGI:2441758]
66. Adnp ENSMUSG00000051149 4 0.895 - 0.895 - - - - activity-dependent neuroprotective protein [Source:MGI Symbol;Acc:MGI:1338758]
67. Gm10608 ENSMUSG00000111197 5 0.895 - 0.895 - - - - predicted gene 10608 [Source:MGI Symbol;Acc:MGI:3642009]
68. Gm16112 ENSMUSG00000089793 1 0.895 - 0.895 - - - - predicted gene 16112 [Source:MGI Symbol;Acc:MGI:3801973]
69. Gm14664 ENSMUSG00000087401 1 0.895 - 0.895 - - - - predicted gene 14664 [Source:MGI Symbol;Acc:MGI:3705306]
70. Gm7909 ENSMUSG00000098068 8 0.895 - 0.895 - - - - predicted gene 7909 [Source:MGI Symbol;Acc:MGI:3645643]
71. Srp54c ENSMUSG00000079108 7 0.895 - 0.895 - - - - signal recognition particle 54C [Source:MGI Symbol;Acc:MGI:3714359]
72. B230317F23Rik ENSMUSG00000045746 16 0.895 - - 0.895 - - - RIKEN cDNA B230317F23 gene [Source:MGI Symbol;Acc:MGI:2443920]
73. Gm12245 ENSMUSG00000083657 1 0.895 - 0.895 - - - - predicted gene 12245 [Source:MGI Symbol;Acc:MGI:3649494]
74. Gm7367 ENSMUSG00000047370 2 0.895 - 0.895 - - - - predicted pseudogene 7367 [Source:MGI Symbol;Acc:MGI:3646404]
75. Nkx6-3 ENSMUSG00000063672 20 0.895 - 0.895 - - - - NK6 homeobox 3 [Source:MGI Symbol;Acc:MGI:1921811]
76. Gm22728 ENSMUSG00000088712 2 0.895 - 0.895 - - - - predicted gene, 22728 [Source:MGI Symbol;Acc:MGI:5452505]
77. Cilp2 ENSMUSG00000044006 19 0.895 - 0.895 - - - - cartilage intermediate layer protein 2 [Source:MGI Symbol;Acc:MGI:1915959]
78. Cyp2j13 ENSMUSG00000028571 1 0.895 - 0.895 - - - - cytochrome P450, family 2, subfamily j, polypeptide 13 [Source:MGI Symbol;Acc:MGI:2385197]
79. Tex35 ENSMUSG00000026592 3 0.895 - 0.895 - - - - testis expressed 35 [Source:MGI Symbol;Acc:MGI:1920685]
80. AA387200 ENSMUSG00000085946 7 0.895 - 0.895 - - - - expressed sequence AA387200 [Source:MGI Symbol;Acc:MGI:3034170]
81. Gm14053 ENSMUSG00000082849 1 0.895 - 0.895 - - - - predicted gene 14053 [Source:MGI Symbol;Acc:MGI:3651943]
82. Gm8878 ENSMUSG00000092460 7 0.895 - 0.895 - - - - predicted gene 8878 [Source:MGI Symbol;Acc:MGI:3648906]
83. Gm26592 ENSMUSG00000097535 2 0.895 - 0.895 - - - - predicted gene, 26592 [Source:MGI Symbol;Acc:MGI:5477086]
84. Gm21846 ENSMUSG00000094832 50 0.892 - - 0.892 - - - predicted gene, 21846 [Source:MGI Symbol;Acc:MGI:5434010]
85. Gm17477 ENSMUSG00000084917 24 0.888 - - 0.888 - - - predicted gene, 17477 [Source:MGI Symbol;Acc:MGI:4937111]
86. Akr1c19 ENSMUSG00000071551 132 0.887 0.887 - - - - - aldo-keto reductase family 1, member C19 [Source:MGI Symbol;Acc:MGI:2653678]
87. Mir22hg ENSMUSG00000085148 94 0.884 - - 0.884 - - - Mir22 host gene (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914348]
88. Gm3468 ENSMUSG00000094634 73 0.875 - - 0.875 - - - predicted gene 3468 [Source:MGI Symbol;Acc:MGI:3781644]
89. Gm11273 ENSMUSG00000079941 12 0.874 - - 0.874 - - - predicted gene 11273 [Source:MGI Symbol;Acc:MGI:3649411]
90. Gm13443 ENSMUSG00000075391 28 0.873 - - 0.873 - - - predicted gene 13443 [Source:MGI Symbol;Acc:MGI:3649615]
91. Gm16861 ENSMUSG00000097397 24 0.873 - - 0.873 - - - predicted gene, 16861 [Source:MGI Symbol;Acc:MGI:4439785]
92. Gm15939 ENSMUSG00000090087 9 0.87 - - - 0.870 - - predicted gene 15939 [Source:MGI Symbol;Acc:MGI:3801831]
93. 4933407L21Rik ENSMUSG00000026224 3 0.87 - - - 0.870 - - RIKEN cDNA 4933407L21 gene [Source:MGI Symbol;Acc:MGI:1918391]
94. Gm9432 ENSMUSG00000083199 20 0.87 - - - 0.870 - - predicted gene 9432 [Source:MGI Symbol;Acc:MGI:3648371]
95. Gm26836 ENSMUSG00000097051 4 0.87 - - - 0.870 - - predicted gene, 26836 [Source:MGI Symbol;Acc:MGI:5477330]
96. Slc22a28 ENSMUSG00000063590 3 0.87 - - - 0.870 - - solute carrier family 22, member 28 [Source:MGI Symbol;Acc:MGI:3645714]
97. Gm12737 ENSMUSG00000085093 4 0.87 - - - 0.870 - - predicted gene 12737 [Source:MGI Symbol;Acc:MGI:3651021]
98. Fam187a ENSMUSG00000075510 5 0.87 - - - 0.870 - - family with sequence similarity 187, member A [Source:MGI Symbol;Acc:MGI:1914034]
99. Tcam1 ENSMUSG00000020712 7 0.87 - - - 0.870 - - testicular cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1923120]
100. Gm25339 ENSMUSG00000088083 1 0.87 - - - 0.870 - - predicted gene, 25339 [Source:MGI Symbol;Acc:MGI:5455116]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA