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Results for Rtf1

Gene Name Gene ID Reads Annotation
Rtf1 ENSMUSG00000027304 6877 RTF1, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:1309480]







Genes with expression patterns similar to Rtf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rtf1 ENSMUSG00000027304 6877 6 1.000 1.000 1.000 1.000 1.000 1.000 RTF1, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:1309480]
2. Kif26b ENSMUSG00000026494 872 1.449 - 0.749 0.700 - - - kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
3. Atf7ip ENSMUSG00000030213 6338 0.92 0.920 - - - - - activating transcription factor 7 interacting protein [Source:MGI Symbol;Acc:MGI:1858965]
4. Ythdf3 ENSMUSG00000047213 4562 0.913 0.913 - - - - - YTH domain family 3 [Source:MGI Symbol;Acc:MGI:1918850]
5. Prkaca ENSMUSG00000005469 3541 0.901 0.901 - - - - - protein kinase, cAMP dependent, catalytic, alpha [Source:MGI Symbol;Acc:MGI:97592]
6. Htatsf1 ENSMUSG00000067873 3155 0.901 0.901 - - - - - HIV TAT specific factor 1 [Source:MGI Symbol;Acc:MGI:1919709]
7. Rheb ENSMUSG00000028945 6870 0.894 0.894 - - - - - Ras homolog enriched in brain [Source:MGI Symbol;Acc:MGI:97912]
8. Vps37a ENSMUSG00000031600 1773 0.894 0.894 - - - - - vacuolar protein sorting 37A [Source:MGI Symbol;Acc:MGI:1261835]
9. Prmt7 ENSMUSG00000060098 1358 0.868 - 0.868 - - - - protein arginine N-methyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384879]
10. Nhp2 ENSMUSG00000001056 4557 0.865 - 0.865 - - - - NHP2 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1098547]
11. Papola ENSMUSG00000021111 9036 0.862 0.862 - - - - - poly (A) polymerase alpha [Source:MGI Symbol;Acc:MGI:109301]
12. Ubap1 ENSMUSG00000028437 2702 0.859 - 0.859 - - - - ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
13. Lphn2 Lphn2 6084 0.859 - 0.859 - - - -
14. Polr2a ENSMUSG00000005198 7744 0.854 0.854 - - - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:98086]
15. Atp5h ENSMUSG00000034566 13302 0.853 0.853 - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D [Source:MGI Symbol;Acc:MGI:1918929]
16. Nsmce1 ENSMUSG00000030750 3511 0.847 - 0.847 - - - - NSE1 homolog, SMC5-SMC6 complex component [Source:MGI Symbol;Acc:MGI:1914961]
17. Naa50 ENSMUSG00000022698 7380 0.844 - 0.844 - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:MGI Symbol;Acc:MGI:1919367]
18. Phf17 Phf17 2938 0.84 - 0.840 - - - -
19. Tpr ENSMUSG00000006005 4170 0.837 - 0.837 - - - - translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]
20. Atrnl1 ENSMUSG00000054843 2039 0.837 - 0.837 - - - - attractin like 1 [Source:MGI Symbol;Acc:MGI:2147749]
21. Sp3 ENSMUSG00000027109 2707 0.835 - 0.835 - - - - trans-acting transcription factor 3 [Source:MGI Symbol;Acc:MGI:1277166]
22. Tnfaip8 ENSMUSG00000062210 2429 0.833 - 0.833 - - - - tumor necrosis factor, alpha-induced protein 8 [Source:MGI Symbol;Acc:MGI:2147191]
23. Atp6v1a ENSMUSG00000052459 6222 0.833 - 0.833 - - - - ATPase, H+ transporting, lysosomal V1 subunit A [Source:MGI Symbol;Acc:MGI:1201780]
24. Mdh1 ENSMUSG00000020321 7848 0.832 - 0.832 - - - - malate dehydrogenase 1, NAD (soluble) [Source:MGI Symbol;Acc:MGI:97051]
25. Ppp4r1 ENSMUSG00000061950 1525 0.831 - 0.831 - - - - protein phosphatase 4, regulatory subunit 1 [Source:MGI Symbol;Acc:MGI:1917601]
26. Bet1l ENSMUSG00000025484 4660 0.831 - 0.831 - - - - Bet1 golgi vesicular membrane trafficking protein like [Source:MGI Symbol;Acc:MGI:1913128]
27. Efcab14 ENSMUSG00000034210 1252 0.828 - 0.828 - - - - EF-hand calcium binding domain 14 [Source:MGI Symbol;Acc:MGI:2442397]
28. Bola3 ENSMUSG00000045160 1800 0.827 - 0.827 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
29. Flrt2 ENSMUSG00000047414 2697 0.827 - 0.827 - - - - fibronectin leucine rich transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:3603594]
30. Cenpn ENSMUSG00000031756 2208 0.826 - 0.826 - - - - centromere protein N [Source:MGI Symbol;Acc:MGI:1919405]
31. Gramd1a ENSMUSG00000001248 2162 0.823 - 0.823 - - - - GRAM domain containing 1A [Source:MGI Symbol;Acc:MGI:105490]
32. Cnnm3 ENSMUSG00000001138 1820 0.823 - 0.823 - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
33. Naa16 ENSMUSG00000022020 1204 0.822 - 0.822 - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:MGI Symbol;Acc:MGI:1914147]
34. Mapk1 ENSMUSG00000063358 8354 0.822 - 0.822 - - - - mitogen-activated protein kinase 1 [Source:MGI Symbol;Acc:MGI:1346858]
35. Tusc3 ENSMUSG00000039530 1167 0.821 - 0.821 - - - - tumor suppressor candidate 3 [Source:MGI Symbol;Acc:MGI:1933134]
36. Eif5b ENSMUSG00000026083 14456 0.821 0.821 - - - - - eukaryotic translation initiation factor 5B [Source:MGI Symbol;Acc:MGI:2441772]
37. Etv6 ENSMUSG00000030199 1566 0.82 - 0.820 - - - - ets variant 6 [Source:MGI Symbol;Acc:MGI:109336]
38. Sos1 ENSMUSG00000024241 2081 0.82 - 0.820 - - - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:MGI Symbol;Acc:MGI:98354]
39. Zfp106 ENSMUSG00000027288 2359 0.818 - 0.818 - - - - zinc finger protein 106 [Source:MGI Symbol;Acc:MGI:1270153]
40. Wdsub1 ENSMUSG00000026988 729 0.818 - 0.818 - - - - WD repeat, SAM and U-box domain containing 1 [Source:MGI Symbol;Acc:MGI:1919387]
41. Tmem183a ENSMUSG00000042305 2170 0.818 - 0.818 - - - - transmembrane protein 183A [Source:MGI Symbol;Acc:MGI:1914729]
42. Psmc3 ENSMUSG00000002102 7751 0.817 0.817 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754]
43. Ppm1d ENSMUSG00000020525 1303 0.817 - 0.817 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
44. Clcn4-2 Clcn4-2 3290 0.816 - 0.816 - - - -
45. Lrrc8a ENSMUSG00000007476 3202 0.814 - 0.814 - - - - leucine rich repeat containing 8A [Source:MGI Symbol;Acc:MGI:2652847]
46. Tmem222 ENSMUSG00000028857 1326 0.814 - 0.814 - - - - transmembrane protein 222 [Source:MGI Symbol;Acc:MGI:1098568]
47. Hbp1 ENSMUSG00000002996 4468 0.814 0.814 - - - - - high mobility group box transcription factor 1 [Source:MGI Symbol;Acc:MGI:894659]
48. Cope ENSMUSG00000055681 1600 0.814 - 0.814 - - - - coatomer protein complex, subunit epsilon [Source:MGI Symbol;Acc:MGI:1891702]
49. Suv39h2 ENSMUSG00000026646 2030 0.813 - 0.813 - - - - suppressor of variegation 3-9 2 [Source:MGI Symbol;Acc:MGI:1890396]
50. Reps1 ENSMUSG00000019854 1546 0.812 - 0.812 - - - - RalBP1 associated Eps domain containing protein [Source:MGI Symbol;Acc:MGI:1196373]
51. Mylk ENSMUSG00000022836 1114 0.812 - 0.812 - - - - myosin, light polypeptide kinase [Source:MGI Symbol;Acc:MGI:894806]
52. Snrpa1 ENSMUSG00000030512 3270 0.812 - 0.812 - - - - small nuclear ribonucleoprotein polypeptide A' [Source:MGI Symbol;Acc:MGI:1916231]
53. A230046K03Rik 1222 0.811 - 0.811 - - - - RIKEN cDNA A230046K03 gene, transcript variant X2
54. Slc38a6 ENSMUSG00000044712 3143 0.811 - 0.811 - - - - solute carrier family 38, member 6 [Source:MGI Symbol;Acc:MGI:3648156]
55. Gatc ENSMUSG00000029536 892 0.81 - 0.810 - - - - glutamyl-tRNA(Gln) amidotransferase, subunit C [Source:MGI Symbol;Acc:MGI:1923776]
56. H3f3a ENSMUSG00000060743 1794 0.809 - 0.809 - - - - H3 histone, family 3A [Source:MGI Symbol;Acc:MGI:1097686]
57. Mtus1 ENSMUSG00000045636 912 0.809 - 0.809 - - - - mitochondrial tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2142572]
58. Csnk2a2 ENSMUSG00000046707 954 0.809 - 0.809 - - - - casein kinase 2, alpha prime polypeptide [Source:MGI Symbol;Acc:MGI:88547]
59. Ssr1 ENSMUSG00000021427 10103 0.808 - 0.808 - - - - signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]
60. Aco1 ENSMUSG00000028405 1315 0.808 - 0.808 - - - - aconitase 1 [Source:MGI Symbol;Acc:MGI:87879]
61. Rnf19a ENSMUSG00000022280 802 0.808 - 0.808 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
62. Fam115a Fam115a 5095 0.807 - 0.807 - - - -
63. Unk ENSMUSG00000020770 1364 0.807 - 0.807 - - - - unkempt family zinc finger [Source:MGI Symbol;Acc:MGI:2442456]
64. Cacfd1 ENSMUSG00000015488 2060 0.807 - 0.807 - - - - calcium channel flower domain containing 1 [Source:MGI Symbol;Acc:MGI:1924317]
65. Traf7 ENSMUSG00000052752 5066 0.806 - 0.806 - - - - TNF receptor-associated factor 7 [Source:MGI Symbol;Acc:MGI:3042141]
66. Ube3c ENSMUSG00000039000 1417 0.806 - 0.806 - - - - ubiquitin protein ligase E3C [Source:MGI Symbol;Acc:MGI:2140998]
67. Cdc42ep1 ENSMUSG00000049521 1316 0.805 - 0.805 - - - - CDC42 effector protein (Rho GTPase binding) 1 [Source:MGI Symbol;Acc:MGI:1929763]
68. Commd2 ENSMUSG00000036513 1709 0.804 - 0.804 - - - - COMM domain containing 2 [Source:MGI Symbol;Acc:MGI:1098806]
69. Bbs2 ENSMUSG00000031755 976 0.804 - 0.804 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
70. Gm20498 ENSMUSG00000021139 663 0.804 - 0.804 - - - - predicted gene 20498 [Source:MGI Symbol;Acc:MGI:5141963]
71. Supt4a ENSMUSG00000020485 3703 0.804 - 0.804 - - - - suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
72. Cbx1 ENSMUSG00000018666 11754 0.804 - 0.804 - - - - chromobox 1 [Source:MGI Symbol;Acc:MGI:105369]
73. Rabl6 ENSMUSG00000015087 1555 0.804 - 0.804 - - - - RAB, member RAS oncogene family-like 6 [Source:MGI Symbol;Acc:MGI:2442633]
74. Kdm2a ENSMUSG00000054611 5503 0.803 0.803 - - - - - lysine (K)-specific demethylase 2A [Source:MGI Symbol;Acc:MGI:1354736]
75. Trim39 ENSMUSG00000045409 968 0.803 - 0.803 - - - - tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
76. Hspa8 ENSMUSG00000015656 1860 0.803 - 0.803 - - - - heat shock protein 8 [Source:MGI Symbol;Acc:MGI:105384]
77. Clptm1l ENSMUSG00000021610 2055 0.802 - 0.802 - - - - CLPTM1-like [Source:MGI Symbol;Acc:MGI:2442892]
78. Smim15 ENSMUSG00000071180 3604 0.802 - 0.802 - - - - small integral membrane protein 15 [Source:MGI Symbol;Acc:MGI:1922866]
79. Efs ENSMUSG00000022203 645 0.801 - 0.801 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
80. Dis3 ENSMUSG00000033166 1478 0.801 - 0.801 - - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:1919912]
81. Aurka ENSMUSG00000027496 2227 0.801 - 0.801 - - - - aurora kinase A [Source:MGI Symbol;Acc:MGI:894678]
82. Bscl2 ENSMUSG00000071657 1974 0.798 - 0.798 - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]
83. Ddx46 ENSMUSG00000021500 5083 0.798 0.798 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:MGI Symbol;Acc:MGI:1920895]
84. Uspl1 ENSMUSG00000041264 1822 0.798 - 0.798 - - - - ubiquitin specific peptidase like 1 [Source:MGI Symbol;Acc:MGI:2442342]
85. Shisa5 ENSMUSG00000025647 1562 0.798 - 0.798 - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
86. Mettl2 ENSMUSG00000020691 572 0.797 - 0.797 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
87. Cdc73 ENSMUSG00000026361 2326 0.797 - 0.797 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
88. Gtl3 Gtl3 1883 0.797 - 0.797 - - - -
89. Hoxa9 ENSMUSG00000038227 2175 0.796 - 0.796 - - - - homeobox A9 [Source:MGI Symbol;Acc:MGI:96180]
90. Ankfy1 ENSMUSG00000020790 1629 0.796 - 0.796 - - - - ankyrin repeat and FYVE domain containing 1 [Source:MGI Symbol;Acc:MGI:1337008]
91. Pank2 ENSMUSG00000037514 1182 0.796 - 0.796 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
92. Tex10 ENSMUSG00000028345 705 0.795 - 0.795 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
93. Sptbn2 ENSMUSG00000067889 4571 0.795 - 0.795 - - - - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
94. Smg1 ENSMUSG00000030655 6079 0.794 - 0.794 - - - - SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:MGI Symbol;Acc:MGI:1919742]
95. Ccdc23 Ccdc23 2476 0.794 0.794 - - - - -
96. Gm6368 ENSMUSG00000080775 1795 0.793 - 0.793 - - - - predicted gene 6368 [Source:MGI Symbol;Acc:MGI:3644537]
97. Cacna2d1 ENSMUSG00000040118 2307 0.793 - 0.793 - - - - calcium channel, voltage-dependent, alpha2/delta subunit 1 [Source:MGI Symbol;Acc:MGI:88295]
98. Kti12 ENSMUSG00000073775 1671 0.793 - 0.793 - - - - KTI12 homolog, chromatin associated [Source:MGI Symbol;Acc:MGI:1923547]
99. H2afj ENSMUSG00000060032 2159 0.792 - 0.792 - - - - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
100. Slc9a8 ENSMUSG00000039463 761 0.792 - 0.792 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]

There are 403 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA