Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rrp1b

Gene Name Gene ID Reads Annotation
Rrp1b ENSMUSG00000058392 1375 ribosomal RNA processing 1 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919712]







Genes with expression patterns similar to Rrp1b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rrp1b ENSMUSG00000058392 1375 6 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 1 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919712]
2. Btbd9 ENSMUSG00000062202 1289 1.755 - 0.906 - - - 0.849 BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
3. Wdr74 ENSMUSG00000042729 669 1.753 - 0.920 - - - 0.833 WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
4. Zfp866 ENSMUSG00000043090 1114 1.73 - 0.874 - - 0.856 - zinc finger protein 866 [Source:MGI Symbol;Acc:MGI:3584369]
5. Csrp2bp 1398 1.699 - 0.904 - - 0.795 - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
6. Aldh6a1 ENSMUSG00000021238 522 1.68 0.766 0.914 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
7. Mcm10 ENSMUSG00000026669 1289 1.664 - 0.876 - - 0.788 - minichromosome maintenance 10 replication initiation factor [Source:MGI Symbol;Acc:MGI:1917274]
8. Amotl2 ENSMUSG00000032531 4205 1.658 - 0.790 - - 0.868 - angiomotin-like 2 [Source:MGI Symbol;Acc:MGI:1929286]
9. Decr2 ENSMUSG00000036775 1047 1.656 - 0.910 - - 0.746 - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
10. Rhbdf1 ENSMUSG00000020282 1113 1.649 - 0.922 - - 0.727 - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
11. Samd14 ENSMUSG00000047181 851 1.631 - 0.864 - - - 0.767 sterile alpha motif domain containing 14 [Source:MGI Symbol;Acc:MGI:2384945]
12. Ddx27 ENSMUSG00000017999 1798 1.624 0.728 - - - 0.896 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
13. Atg13 ENSMUSG00000027244 1178 1.602 - 0.809 - - 0.793 - autophagy related 13 [Source:MGI Symbol;Acc:MGI:1196429]
14. Cdc6 ENSMUSG00000017499 1721 1.599 - - - - 0.759 0.840 cell division cycle 6 [Source:MGI Symbol;Acc:MGI:1345150]
15. Napa ENSMUSG00000006024 5135 1.597 0.820 - - - 0.777 - N-ethylmaleimide sensitive fusion protein attachment protein alpha [Source:MGI Symbol;Acc:MGI:104563]
16. Mcoln1 ENSMUSG00000004567 281 1.575 0.707 - - - 0.868 - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]
17. Dpp9 ENSMUSG00000001229 4444 1.573 0.840 - - - 0.733 - dipeptidylpeptidase 9 [Source:MGI Symbol;Acc:MGI:2443967]
18. Sec24a ENSMUSG00000036391 1990 1.57 - 0.861 - - 0.709 - Sec24 related gene family, member A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924621]
19. Cenpt ENSMUSG00000036672 1001 1.569 - 0.838 - - 0.731 - centromere protein T [Source:MGI Symbol;Acc:MGI:2443939]
20. Rnf215 ENSMUSG00000003581 988 1.567 0.830 - - - 0.737 - ring finger protein 215 [Source:MGI Symbol;Acc:MGI:1918923]
21. Gm4117 ENSMUSG00000089940 1066 1.561 0.713 - - - 0.848 - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
22. Zfp451 ENSMUSG00000042197 3435 1.546 - 0.803 - - 0.743 - zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
23. Lmbr1 ENSMUSG00000010721 572 1.543 0.711 - - - 0.832 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
24. Abr ENSMUSG00000017631 1461 1.539 - - - - 0.793 0.746 active BCR-related gene [Source:MGI Symbol;Acc:MGI:107771]
25. Trim12c ENSMUSG00000057143 330 1.454 0.727 0.727 - - - - tripartite motif-containing 12C [Source:MGI Symbol;Acc:MGI:4821183]
26. Cnot6l ENSMUSG00000034724 2623 0.948 - 0.948 - - - - CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]
27. Ubtd1 ENSMUSG00000025171 336 0.944 - 0.944 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
28. Wdr46 ENSMUSG00000024312 449 0.935 - 0.935 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
29. Gm12942 332 0.934 - 0.934 - - - - predicted gene 12942
30. Gm25735 ENSMUSG00000092905 617 0.933 - 0.933 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
31. 0610009B22Rik ENSMUSG00000007777 752 0.932 - 0.932 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
32. Pabpc4l ENSMUSG00000090919 1259 0.932 - 0.932 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
33. 2010111I01Rik ENSMUSG00000021458 591 0.931 - 0.931 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
34. Smpd3 ENSMUSG00000031906 194 0.931 - 0.931 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
35. Pla2g15 ENSMUSG00000031903 321 0.931 - 0.931 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
36. Dhx34 ENSMUSG00000006019 240 0.93 - 0.930 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
37. Gm4944 968 0.929 - 0.929 - - - - predicted gene 4944
38. Zfp71-rs1 Zfp71-rs1 629 0.929 - 0.929 - - - -
39. Zbtb12 ENSMUSG00000049823 373 0.929 - 0.929 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
40. Gm25734 Gm25734 104 0.928 - 0.928 - - - -
41. Apoo ENSMUSG00000079508 815 0.928 - 0.928 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
42. Gm26981 ENSMUSG00000098041 717 0.928 - 0.928 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
43. Cd302 ENSMUSG00000060703 214 0.928 - 0.928 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
44. Klhl6 ENSMUSG00000043008 952 0.928 - 0.928 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
45. AK129341 AK129341 204 0.928 - 0.928 - - - -
46. Usp36 ENSMUSG00000033909 2464 0.928 - 0.928 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
47. Ptges3l ENSMUSG00000097487 146 0.927 - 0.927 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
48. Cyp27a1 ENSMUSG00000026170 153 0.927 - 0.927 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
49. Usp35 ENSMUSG00000035713 112 0.927 - 0.927 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
50. Nradd ENSMUSG00000032491 668 0.927 - 0.927 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
51. Suclg2 ENSMUSG00000061838 465 0.927 - 0.927 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
52. Rab11fip5 ENSMUSG00000051343 496 0.927 - 0.927 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
53. Gm26782 ENSMUSG00000097431 428 0.926 - 0.926 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
54. Gatad2b ENSMUSG00000042390 1312 0.926 - 0.926 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
55. Cetn4 ENSMUSG00000045031 377 0.926 - 0.926 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
56. Ccne1 ENSMUSG00000002068 2574 0.926 - 0.926 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
57. 2610035D17Rik ENSMUSG00000087259 651 0.926 - 0.926 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
58. Plekhm1 ENSMUSG00000034247 251 0.926 - 0.926 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
59. Rpl27-ps2 ENSMUSG00000082171 89 0.926 - 0.926 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
60. Inadl 509 0.926 - 0.926 - - - - InaD-like (Drosophila), transcript variant X9
61. Slc38a3 ENSMUSG00000010064 147 0.925 - 0.925 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
62. Ap2a1 ENSMUSG00000060279 108 0.925 - 0.925 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
63. Smim4 ENSMUSG00000058351 454 0.925 - 0.925 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
64. Ppp4r4 ENSMUSG00000021209 242 0.925 - 0.925 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
65. Zfp369 ENSMUSG00000021514 1130 0.924 - 0.924 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
66. Pdpr ENSMUSG00000033624 123 0.924 - 0.924 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
67. Harbi1 ENSMUSG00000027243 348 0.924 - 0.924 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
68. Extl1 ENSMUSG00000028838 63 0.924 - 0.924 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
69. Tmem186 ENSMUSG00000043140 711 0.924 - 0.924 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
70. Kcnk5 ENSMUSG00000023243 191 0.923 - 0.923 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
71. Zfp865 ENSMUSG00000074405 1223 0.923 - 0.923 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
72. Sh3glb2 ENSMUSG00000026860 1046 0.923 - 0.923 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
73. Atg3 ENSMUSG00000022663 1323 0.922 - 0.922 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
74. Frk ENSMUSG00000019779 639 0.921 - 0.921 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
75. 2210408I21Rik ENSMUSG00000071252 189 0.921 - 0.921 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
76. Tmem126b ENSMUSG00000030614 743 0.921 - 0.921 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
77. Bckdha ENSMUSG00000060376 653 0.921 - 0.921 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
78. Rbm12b1 ENSMUSG00000046667 331 0.92 - 0.920 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
79. Ing2 ENSMUSG00000063049 913 0.92 - 0.920 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
80. Pom121 ENSMUSG00000053293 574 0.92 - 0.920 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
81. Twf2 ENSMUSG00000023277 849 0.92 - 0.920 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
82. Lnp 1121 0.919 - 0.919 - - - - limb and neural patterns, transcript variant X4
83. Tmem26 ENSMUSG00000060044 379 0.919 - 0.919 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
84. Zcchc9 ENSMUSG00000021621 1003 0.919 - 0.919 - - - - zinc finger, CCHC domain containing 9 [Source:MGI Symbol;Acc:MGI:1916335]
85. Gmds ENSMUSG00000038372 653 0.919 - 0.919 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
86. Zfp11 ENSMUSG00000051034 218 0.919 - 0.919 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
87. Prkag1 ENSMUSG00000067713 1318 0.919 - 0.919 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
88. Mirg ENSMUSG00000097391 2711 0.918 - 0.918 - - - - miRNA containing gene [Source:MGI Symbol;Acc:MGI:3781106]
89. Tmcc1 ENSMUSG00000030126 2753 0.918 - 0.918 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
90. Mcc ENSMUSG00000071856 4024 0.918 - 0.918 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
91. Tmem246 ENSMUSG00000039611 866 0.918 - 0.918 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
92. Zfp160 ENSMUSG00000067942 1222 0.918 - 0.918 - - - - zinc finger protein 160 [Source:MGI Symbol;Acc:MGI:108187]
93. Gm5776 ENSMUSG00000099647 589 0.918 - 0.918 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
94. Trim8 ENSMUSG00000025034 1494 0.918 - 0.918 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
95. Dcun1d3 ENSMUSG00000048787 898 0.917 - 0.917 - - - - DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2679003]
96. Syne4 ENSMUSG00000019737 724 0.917 - 0.917 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
97. Cbfa2t3 ENSMUSG00000006362 817 0.917 - 0.917 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
98. Car8 ENSMUSG00000041261 286 0.917 - 0.917 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
99. Rin2 ENSMUSG00000001768 996 0.916 - 0.916 - - - - Ras and Rab interactor 2 [Source:MGI Symbol;Acc:MGI:1921280]
100. Fbxo25 ENSMUSG00000038365 940 0.916 - 0.916 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]

There are 871 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA