Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rpap3

Gene Name Gene ID Reads Annotation
Rpap3 ENSMUSG00000022466 1172 RNA polymerase II associated protein 3 [Source:MGI Symbol;Acc:MGI:1277218]







Genes with expression patterns similar to Rpap3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rpap3 ENSMUSG00000022466 1172 6 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II associated protein 3 [Source:MGI Symbol;Acc:MGI:1277218]
2. Dock11 ENSMUSG00000031093 1274 0.954 0.954 - - - - - dedicator of cytokinesis 11 [Source:MGI Symbol;Acc:MGI:1923224]
3. Ahcyl1 ENSMUSG00000027893 2818 0.951 0.951 - - - - - S-adenosylhomocysteine hydrolase-like 1 [Source:MGI Symbol;Acc:MGI:2385184]
4. Syap1 ENSMUSG00000031357 404 0.951 0.951 - - - - - synapse associated protein 1 [Source:MGI Symbol;Acc:MGI:1914293]
5. Prr5 ENSMUSG00000036106 931 0.951 0.951 - - - - - proline rich 5 (renal) [Source:MGI Symbol;Acc:MGI:1924714]
6. Pknox1 ENSMUSG00000006705 1830 0.947 0.947 - - - - - Pbx/knotted 1 homeobox [Source:MGI Symbol;Acc:MGI:1201409]
7. Zkscan17 ENSMUSG00000020472 1572 0.944 0.944 - - - - - zinc finger with KRAB and SCAN domains 17 [Source:MGI Symbol;Acc:MGI:2679270]
8. N4bp1 ENSMUSG00000031652 1689 0.943 0.943 - - - - - NEDD4 binding protein 1 [Source:MGI Symbol;Acc:MGI:2136825]
9. Itpa ENSMUSG00000074797 2685 0.943 0.943 - - - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:MGI Symbol;Acc:MGI:96622]
10. L3mbtl2 ENSMUSG00000022394 583 0.943 0.943 - - - - - L3MBTL2 polycomb repressive complex 1 subunit [Source:MGI Symbol;Acc:MGI:2443584]
11. Rap2a ENSMUSG00000051615 1453 0.943 0.943 - - - - - RAS related protein 2a [Source:MGI Symbol;Acc:MGI:97855]
12. Usp45 ENSMUSG00000040455 1493 0.942 0.942 - - - - - ubiquitin specific petidase 45 [Source:MGI Symbol;Acc:MGI:101850]
13. Cask ENSMUSG00000031012 1836 0.942 0.942 - - - - - calcium/calmodulin-dependent serine protein kinase (MAGUK family) [Source:MGI Symbol;Acc:MGI:1309489]
14. Hmces ENSMUSG00000030060 1439 0.941 0.941 - - - - - 5-hydroxymethylcytosine (hmC) binding, ES cell specific [Source:MGI Symbol;Acc:MGI:1914053]
15. Rdh11 ENSMUSG00000066441 818 0.94 0.940 - - - - - retinol dehydrogenase 11 [Source:MGI Symbol;Acc:MGI:102581]
16. Hlf ENSMUSG00000003949 155 0.94 0.940 - - - - - hepatic leukemia factor [Source:MGI Symbol;Acc:MGI:96108]
17. Slc31a1 ENSMUSG00000066150 1810 0.94 0.940 - - - - - solute carrier family 31, member 1 [Source:MGI Symbol;Acc:MGI:1333843]
18. Zdhhc8 ENSMUSG00000060166, ENSMUSG00000108733 643 0.939 0.939 - - - - - zinc finger, DHHC domain containing 8 [Source:MGI Symbol;Acc:MGI:1338012]
19. Fdx1 ENSMUSG00000032051 1041 0.939 0.939 - - - - - ferredoxin 1 [Source:MGI Symbol;Acc:MGI:103224]
20. Slc35f5 ENSMUSG00000026342 450 0.939 0.939 - - - - - solute carrier family 35, member F5 [Source:MGI Symbol;Acc:MGI:1921400]
21. Sgk1 ENSMUSG00000019970 822 0.939 0.939 - - - - - serum/glucocorticoid regulated kinase 1 [Source:MGI Symbol;Acc:MGI:1340062]
22. Sde2 ENSMUSG00000038806 1632 0.938 0.938 - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:MGI Symbol;Acc:MGI:2384788]
23. Donson ENSMUSG00000022960 569 0.937 0.937 - - - - - downstream neighbor of SON [Source:MGI Symbol;Acc:MGI:1890621]
24. Slk ENSMUSG00000025060 3182 0.937 0.937 - - - - - STE20-like kinase [Source:MGI Symbol;Acc:MGI:103241]
25. Slc25a11 ENSMUSG00000014606 1671 0.937 0.937 - - - - - solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 [Source:MGI Symbol;Acc:MGI:1915113]
26. Sec22a ENSMUSG00000034473 906 0.936 0.936 - - - - - SEC22 homolog A, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447876]
27. Cdk5rap3 ENSMUSG00000018669 1103 0.936 0.936 - - - - - CDK5 regulatory subunit associated protein 3 [Source:MGI Symbol;Acc:MGI:1933126]
28. Tomm34 ENSMUSG00000018322 1801 0.936 0.936 - - - - - translocase of outer mitochondrial membrane 34 [Source:MGI Symbol;Acc:MGI:1914395]
29. Abcb7 ENSMUSG00000031333 1518 0.935 0.935 - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:MGI Symbol;Acc:MGI:109533]
30. Gpsm1 ENSMUSG00000026930 656 0.935 0.935 - - - - - G-protein signalling modulator 1 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1915089]
31. Cnbp ENSMUSG00000030057 10385 0.935 0.935 - - - - - cellular nucleic acid binding protein [Source:MGI Symbol;Acc:MGI:88431]
32. Arfgef2 ENSMUSG00000074582 1177 0.935 0.935 - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:MGI Symbol;Acc:MGI:2139354]
33. Psph ENSMUSG00000029446 491 0.935 0.935 - - - - - phosphoserine phosphatase [Source:MGI Symbol;Acc:MGI:97788]
34. Zfp867 ENSMUSG00000054519 263 0.934 0.934 - - - - - zinc finger protein 867 [Source:MGI Symbol;Acc:MGI:2681848]
35. Rpl11 ENSMUSG00000059291 817 0.934 0.934 - - - - - ribosomal protein L11 [Source:MGI Symbol;Acc:MGI:1914275]
36. Cdca7l ENSMUSG00000021175 640 0.934 0.934 - - - - - cell division cycle associated 7 like [Source:MGI Symbol;Acc:MGI:2384982]
37. Smo ENSMUSG00000001761 3918 0.933 0.933 - - - - - smoothened, frizzled class receptor [Source:MGI Symbol;Acc:MGI:108075]
38. Anapc15 ENSMUSG00000030649 420 0.933 0.933 - - - - - anaphase prompoting complex C subunit 15 [Source:MGI Symbol;Acc:MGI:1922680]
39. Trmu ENSMUSG00000022386 468 0.933 0.933 - - - - - tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase [Source:MGI Symbol;Acc:MGI:1919276]
40. Cep76 ENSMUSG00000073542 941 0.933 0.933 - - - - - centrosomal protein 76 [Source:MGI Symbol;Acc:MGI:1923401]
41. Ap3s2 ENSMUSG00000063801 1663 0.933 0.933 - - - - - adaptor-related protein complex 3, sigma 2 subunit [Source:MGI Symbol;Acc:MGI:1337060]
42. Taf5 ENSMUSG00000025049 1038 0.933 0.933 - - - - - TATA-box binding protein associated factor 5 [Source:MGI Symbol;Acc:MGI:2442144]
43. Zfp407 ENSMUSG00000048410 2356 0.933 0.933 - - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
44. Lhx2 ENSMUSG00000000247 529 0.932 0.932 - - - - - LIM homeobox protein 2 [Source:MGI Symbol;Acc:MGI:96785]
45. 2700029M09Rik 2700029M09Rik 1474 0.932 0.932 - - - - -
46. Brsk1 ENSMUSG00000035390 92 0.931 0.931 - - - - - BR serine/threonine kinase 1 [Source:MGI Symbol;Acc:MGI:2685946]
47. Gm24539 ENSMUSG00000093874 77 0.931 0.931 - - - - - predicted gene, 24539 [Source:MGI Symbol;Acc:MGI:5454316]
48. Gm26547 ENSMUSG00000097095 181 0.931 0.931 - - - - - predicted gene, 26547 [Source:MGI Symbol;Acc:MGI:5477041]
49. Wdr7 ENSMUSG00000040560 985 0.931 0.931 - - - - - WD repeat domain 7 [Source:MGI Symbol;Acc:MGI:1860197]
50. Ptges ENSMUSG00000050737 199 0.931 0.931 - - - - - prostaglandin E synthase [Source:MGI Symbol;Acc:MGI:1927593]
51. Bloc1s3 ENSMUSG00000057667 183 0.931 0.931 - - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:MGI Symbol;Acc:MGI:2678952]
52. Sema3d ENSMUSG00000040254 422 0.93 0.930 - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:MGI Symbol;Acc:MGI:1860118]
53. Mtif3 ENSMUSG00000016510 523 0.93 0.930 - - - - - mitochondrial translational initiation factor 3 [Source:MGI Symbol;Acc:MGI:1923616]
54. Cdc40 ENSMUSG00000038446 1468 0.93 0.930 - - - - - cell division cycle 40 [Source:MGI Symbol;Acc:MGI:1918963]
55. Impdh2 ENSMUSG00000062867 107 0.93 0.930 - - - - - inosine monophosphate dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:109367]
56. AI987944 ENSMUSG00000056383 1199 0.93 0.930 - - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
57. 2610002J02Rik 2610002J02Rik 1349 0.929 0.929 - - - - -
58. Tarbp2 ENSMUSG00000023051 2059 0.929 0.929 - - - - - TARBP2, RISC loading complex RNA binding subunit [Source:MGI Symbol;Acc:MGI:103027]
59. E030030I06Rik ENSMUSG00000097327 663 0.929 0.929 - - - - - RIKEN cDNA E030030I06 gene [Source:MGI Symbol;Acc:MGI:2442914]
60. Rbbp5 ENSMUSG00000026439 3721 0.929 0.929 - - - - - retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit [Source:MGI Symbol;Acc:MGI:1918367]
61. Slc25a14 ENSMUSG00000031105 506 0.929 0.929 - - - - - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
62. Usp13 ENSMUSG00000056900 668 0.929 0.929 - - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:MGI Symbol;Acc:MGI:1919857]
63. Apex2 ENSMUSG00000025269 2657 0.929 0.929 - - - - - apurinic/apyrimidinic endonuclease 2 [Source:MGI Symbol;Acc:MGI:1924872]
64. Vcpip1 ENSMUSG00000045210 1764 0.929 0.929 - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:MGI Symbol;Acc:MGI:1917925]
65. Zbtbd6 Zbtbd6 314 0.929 0.929 - - - - -
66. Ccdc86 ENSMUSG00000024732 1487 0.928 0.928 - - - - - coiled-coil domain containing 86 [Source:MGI Symbol;Acc:MGI:1277220]
67. Arhgef7 ENSMUSG00000031511 5683 0.928 0.928 - - - - - Rho guanine nucleotide exchange factor (GEF7) [Source:MGI Symbol;Acc:MGI:1860493]
68. BC052040 ENSMUSG00000040282 1489 0.927 0.927 - - - - - cDNA sequence BC052040 [Source:MGI Symbol;Acc:MGI:3026886]
69. Oprl1 ENSMUSG00000027584 141 0.927 0.927 - - - - - opioid receptor-like 1 [Source:MGI Symbol;Acc:MGI:97440]
70. Dnajc24 ENSMUSG00000027166 393 0.927 0.927 - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:MGI Symbol;Acc:MGI:1919522]
71. Pdzd4 ENSMUSG00000002006 400 0.927 0.927 - - - - - PDZ domain containing 4 [Source:MGI Symbol;Acc:MGI:2443483]
72. Ccdc134 ENSMUSG00000068114 388 0.926 0.926 - - - - - coiled-coil domain containing 134 [Source:MGI Symbol;Acc:MGI:1923707]
73. Pik3r3 ENSMUSG00000028698 1013 0.926 0.926 - - - - - phosphoinositide-3-kinase regulatory subunit 3 [Source:MGI Symbol;Acc:MGI:109277]
74. Rnf40 ENSMUSG00000030816 1096 0.925 0.925 - - - - - ring finger protein 40 [Source:MGI Symbol;Acc:MGI:2142048]
75. 3110053B16Rik ENSMUSG00000085642 248 0.925 0.925 - - - - - RIKEN cDNA 3110053B16 gene [Source:MGI Symbol;Acc:MGI:1920435]
76. Atp8b2 ENSMUSG00000060671 375 0.925 0.925 - - - - - ATPase, class I, type 8B, member 2 [Source:MGI Symbol;Acc:MGI:1859660]
77. Inpp5k ENSMUSG00000006127 361 0.925 0.925 - - - - - inositol polyphosphate 5-phosphatase K [Source:MGI Symbol;Acc:MGI:1194899]
78. Crnkl1 ENSMUSG00000001767 959 0.924 0.924 - - - - - crooked neck pre-mRNA splicing factor 1 [Source:MGI Symbol;Acc:MGI:1914127]
79. Fbxl12 ENSMUSG00000066892 743 0.923 0.923 - - - - - F-box and leucine-rich repeat protein 12 [Source:MGI Symbol;Acc:MGI:1354738]
80. 3110043O21Rik 488 0.923 0.923 - - - - - RIKEN cDNA 3110043O21 gene, transcript variant X2
81. Lamtor2 ENSMUSG00000028062 570 0.922 0.922 - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
82. Phlda1 ENSMUSG00000020205 1434 0.922 0.922 - - - - - pleckstrin homology like domain, family A, member 1 [Source:MGI Symbol;Acc:MGI:1096880]
83. Bhlhb9 ENSMUSG00000072964 1106 0.921 0.921 - - - - - basic helix-loop-helix domain containing, class B9 [Source:MGI Symbol;Acc:MGI:1917487]
84. Hoxb4 ENSMUSG00000038692 2215 0.921 0.921 - - - - - homeobox B4 [Source:MGI Symbol;Acc:MGI:96185]
85. Rab13 ENSMUSG00000027935 658 0.921 0.921 - - - - - RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232]
86. Mrpl46 ENSMUSG00000030612 1324 0.92 0.920 - - - - - mitochondrial ribosomal protein L46 [Source:MGI Symbol;Acc:MGI:1914558]
87. Zcchc4 ENSMUSG00000029179 1006 0.92 0.920 - - - - - zinc finger, CCHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1926046]
88. Lrrfip1 ENSMUSG00000026305 1396 0.92 0.920 - - - - - leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
89. Efcab14 ENSMUSG00000034210 1252 0.919 0.919 - - - - - EF-hand calcium binding domain 14 [Source:MGI Symbol;Acc:MGI:2442397]
90. Stx6 ENSMUSG00000026470 1786 0.919 0.919 - - - - - syntaxin 6 [Source:MGI Symbol;Acc:MGI:1926235]
91. Cdc6 ENSMUSG00000017499 1721 0.919 0.919 - - - - - cell division cycle 6 [Source:MGI Symbol;Acc:MGI:1345150]
92. Mcm9 ENSMUSG00000058298 926 0.919 0.919 - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1918817]
93. Gm12174 ENSMUSG00000080776 570 0.918 0.918 - - - - - predicted gene 12174 [Source:MGI Symbol;Acc:MGI:3651722]
94. Lhfp ENSMUSG00000048332 1807 0.916 0.916 - - - - - lipoma HMGIC fusion partner [Source:MGI Symbol;Acc:MGI:1920048]
95. Tjap1 ENSMUSG00000012296 1888 0.915 0.915 - - - - - tight junction associated protein 1 [Source:MGI Symbol;Acc:MGI:1921344]
96. Mmab ENSMUSG00000029575 2563 0.914 0.914 - - - - - methylmalonic aciduria (cobalamin deficiency) cblB type homolog (human) [Source:MGI Symbol;Acc:MGI:1924947]
97. Angel2 ENSMUSG00000026634 2532 0.914 0.914 - - - - - angel homolog 2 [Source:MGI Symbol;Acc:MGI:1196310]
98. Blm ENSMUSG00000030528 1075 0.914 0.914 - - - - - Bloom syndrome, RecQ like helicase [Source:MGI Symbol;Acc:MGI:1328362]
99. Pdxdc1 ENSMUSG00000022680 1119 0.913 0.913 - - - - - pyridoxal-dependent decarboxylase domain containing 1 [Source:MGI Symbol;Acc:MGI:1920909]
100. Sgce ENSMUSG00000004631 1414 0.912 0.912 - - - - - sarcoglycan, epsilon [Source:MGI Symbol;Acc:MGI:1329042]

There are 192 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA