Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rp9

Gene Name Gene ID Reads Annotation
Rp9 ENSMUSG00000032239 2338 retinitis pigmentosa 9 (human) [Source:MGI Symbol;Acc:MGI:2157166]







Genes with expression patterns similar to Rp9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rp9 ENSMUSG00000032239 2338 6 1.000 1.000 1.000 1.000 1.000 1.000 retinitis pigmentosa 9 (human) [Source:MGI Symbol;Acc:MGI:2157166]
2. Wdr12 ENSMUSG00000026019 1119 0.829 - 0.829 - - - - WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
3. Sdk2 ENSMUSG00000041592 3074 0.827 - 0.827 - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
4. Ttc13 ENSMUSG00000037300 1595 0.815 - 0.815 - - - - tetratricopeptide repeat domain 13 [Source:MGI Symbol;Acc:MGI:2384573]
5. Aida ENSMUSG00000042901 4507 0.814 - 0.814 - - - - axin interactor, dorsalization associated [Source:MGI Symbol;Acc:MGI:1919737]
6. Rchy1 ENSMUSG00000029397 1938 0.813 - 0.813 - - - - ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
7. Timeless ENSMUSG00000039994 1680 0.812 - 0.812 - - - - timeless circadian clock 1 [Source:MGI Symbol;Acc:MGI:1321393]
8. Med21 ENSMUSG00000030291 1555 0.81 - 0.810 - - - - mediator complex subunit 21 [Source:MGI Symbol;Acc:MGI:1347064]
9. Cthrc1 ENSMUSG00000054196, ENSMUSG00000106929 1536 0.81 - 0.810 - - - - collagen triple helix repeat containing 1 [Source:MGI Symbol;Acc:MGI:1915838]
10. Zyx ENSMUSG00000029860 4088 0.808 - 0.808 - - - - zyxin [Source:MGI Symbol;Acc:MGI:103072]
11. Rxra ENSMUSG00000015846 670 0.808 - 0.808 - - - - retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214]
12. Mrpl11 ENSMUSG00000024902 1586 0.807 - 0.807 - - - - mitochondrial ribosomal protein L11 [Source:MGI Symbol;Acc:MGI:2137215]
13. Prkar2a ENSMUSG00000032601 1406 0.804 - 0.804 - - - - protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
14. Phpt1 ENSMUSG00000036504 2457 0.803 - 0.803 - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
15. Leprot ENSMUSG00000035212 3389 0.803 - 0.803 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
16. Bap1 ENSMUSG00000021901 2474 0.8 - 0.800 - - - - Brca1 associated protein 1 [Source:MGI Symbol;Acc:MGI:1206586]
17. Cox19 ENSMUSG00000045438 1299 0.8 - 0.800 - - - - cytochrome c oxidase assembly protein 19 [Source:MGI Symbol;Acc:MGI:1915283]
18. Zfp871 ENSMUSG00000024298 1293 0.797 - 0.797 - - - - zinc finger protein 871 [Source:MGI Symbol;Acc:MGI:1921793]
19. Dusp5 ENSMUSG00000034765 478 0.796 - 0.796 - - - - dual specificity phosphatase 5 [Source:MGI Symbol;Acc:MGI:2685183]
20. Mum1l1 ENSMUSG00000042515 1576 0.794 - 0.794 - - - - melanoma associated antigen (mutated) 1-like 1 [Source:MGI Symbol;Acc:MGI:2445062]
21. Thumpd3 ENSMUSG00000030264 1038 0.794 - 0.794 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
22. Bnip3 ENSMUSG00000078566 3134 0.794 - 0.794 - - - - BCL2/adenovirus E1B interacting protein 3 [Source:MGI Symbol;Acc:MGI:109326]
23. Med14 ENSMUSG00000064127 1226 0.793 - 0.793 - - - - mediator complex subunit 14 [Source:MGI Symbol;Acc:MGI:1349442]
24. Vangl2 ENSMUSG00000026556 2575 0.792 - 0.792 - - - - VANGL planar cell polarity 2 [Source:MGI Symbol;Acc:MGI:2135272]
25. Dhx16 ENSMUSG00000024422 828 0.792 - 0.792 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
26. Hectd3 ENSMUSG00000046861 921 0.791 - 0.791 - - - - HECT domain E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:1923858]
27. Atg16l1 ENSMUSG00000026289 1129 0.79 - 0.790 - - - - autophagy related 16-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1924290]
28. Cyp20a1 ENSMUSG00000049439 1294 0.79 - 0.790 - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
29. Dhx57 ENSMUSG00000035051 1722 0.79 - 0.790 - - - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:MGI Symbol;Acc:MGI:2147067]
30. Rbm3 ENSMUSG00000031167 840 0.789 - 0.789 - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
31. AI846148 3356 0.789 - 0.789 - - - - expressed sequence AI846148, transcript variant X2
32. 2410006H16Rik ENSMUSG00000086841 2953 0.788 - 0.788 - - - - RIKEN cDNA 2410006H16 gene [Source:MGI Symbol;Acc:MGI:1916471]
33. Ctsd ENSMUSG00000007891 898 0.788 - 0.788 - - - - cathepsin D [Source:MGI Symbol;Acc:MGI:88562]
34. Rap1b ENSMUSG00000052681 5282 0.788 - 0.788 - - - - RAS related protein 1b [Source:MGI Symbol;Acc:MGI:894315]
35. 4933434E20Rik ENSMUSG00000027942 2164 0.787 - 0.787 - - - - RIKEN cDNA 4933434E20 gene [Source:MGI Symbol;Acc:MGI:1914027]
36. Wwp1 ENSMUSG00000041058 1490 0.787 - 0.787 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
37. Erh ENSMUSG00000021131 10295 0.787 - 0.787 - - - - ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
38. Nat10 ENSMUSG00000027185 602 0.787 - 0.787 - - - - N-acetyltransferase 10 [Source:MGI Symbol;Acc:MGI:2138939]
39. Lrp5 ENSMUSG00000024913 277 0.786 - 0.786 - - - - low density lipoprotein receptor-related protein 5 [Source:MGI Symbol;Acc:MGI:1278315]
40. Mbnl2 ENSMUSG00000022139 3296 0.786 - 0.786 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
41. Rnf217 ENSMUSG00000063760 460 0.786 - 0.786 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
42. D19Bwg1357e D19Bwg1357e 2534 0.784 - 0.784 - - - -
43. Hist1h3a ENSMUSG00000069265 213 0.784 - 0.784 - - - - histone cluster 1, H3a [Source:MGI Symbol;Acc:MGI:2668828]
44. Pacs1 ENSMUSG00000024855 1048 0.783 - 0.783 - - - - phosphofurin acidic cluster sorting protein 1 [Source:MGI Symbol;Acc:MGI:1277113]
45. Ppp3r1 ENSMUSG00000033953 1296 0.783 - 0.783 - - - - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) [Source:MGI Symbol;Acc:MGI:107172]
46. Kat7 ENSMUSG00000038909 2653 0.782 - 0.782 - - - - K(lysine) acetyltransferase 7 [Source:MGI Symbol;Acc:MGI:2182799]
47. Dap ENSMUSG00000039168 1762 0.782 - 0.782 - - - - death-associated protein [Source:MGI Symbol;Acc:MGI:1918190]
48. Slc7a6 ENSMUSG00000031904 1103 0.78 - 0.780 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 [Source:MGI Symbol;Acc:MGI:2142598]
49. Gtse1 ENSMUSG00000022385 1450 0.78 - 0.780 - - - - G two S phase expressed protein 1 [Source:MGI Symbol;Acc:MGI:1352755]
50. Pcif1 ENSMUSG00000039849 2702 0.779 - 0.779 - - - - PDX1 C-terminal inhibiting factor 1 [Source:MGI Symbol;Acc:MGI:2443858]
51. Snhg6 ENSMUSG00000098234 549 0.777 - 0.777 - - - - small nucleolar RNA host gene 6 [Source:MGI Symbol;Acc:MGI:1921074]
52. Cnot10 ENSMUSG00000056167 1313 0.775 - 0.775 - - - - CCR4-NOT transcription complex, subunit 10 [Source:MGI Symbol;Acc:MGI:1926143]
53. Prkx ENSMUSG00000035725 639 0.775 - 0.775 - - - - protein kinase, X-linked [Source:MGI Symbol;Acc:MGI:1309999]
54. 5730455P16Rik ENSMUSG00000057181 986 0.775 - 0.775 - - - - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
55. Ttc21b ENSMUSG00000034848 584 0.774 - 0.774 - - - - tetratricopeptide repeat domain 21B [Source:MGI Symbol;Acc:MGI:1920918]
56. Phf3 ENSMUSG00000048874 3032 0.773 - 0.773 - - - - PHD finger protein 3 [Source:MGI Symbol;Acc:MGI:2446126]
57. Cdk12 ENSMUSG00000003119 2101 0.773 - 0.773 - - - - cyclin-dependent kinase 12 [Source:MGI Symbol;Acc:MGI:1098802]
58. Ptpn14 ENSMUSG00000026604 1266 0.773 - 0.773 - - - - protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
59. Mlh3 ENSMUSG00000021245 389 0.773 - 0.773 - - - - mutL homolog 3 [Source:MGI Symbol;Acc:MGI:1353455]
60. Caml ENSMUSG00000021501 3056 0.772 - 0.772 - - - - calcium modulating ligand [Source:MGI Symbol;Acc:MGI:104728]
61. Sfxn2 ENSMUSG00000025036 1352 0.771 - 0.771 - - - - sideroflexin 2 [Source:MGI Symbol;Acc:MGI:2137678]
62. Fbxl16 ENSMUSG00000025738 443 0.771 - 0.771 - - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
63. Slco5a1 ENSMUSG00000025938 586 0.77 - 0.770 - - - - solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
64. Map2k3 ENSMUSG00000018932 3443 0.77 - 0.770 - - - - mitogen-activated protein kinase kinase 3 [Source:MGI Symbol;Acc:MGI:1346868]
65. Fam188a 930 0.77 - 0.770 - - - - family with sequence similarity 188, member A, transcript variant X3
66. Dusp2 ENSMUSG00000027368 534 0.77 - 0.770 - - - - dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
67. Cops7a ENSMUSG00000030127 1698 0.77 - 0.770 - - - - COP9 signalosome subunit 7A [Source:MGI Symbol;Acc:MGI:1349400]
68. Ranbp2 ENSMUSG00000003226 1312 0.769 - 0.769 - - - - RAN binding protein 2 [Source:MGI Symbol;Acc:MGI:894323]
69. Prkcsh ENSMUSG00000003402 3565 0.769 - 0.769 - - - - protein kinase C substrate 80K-H [Source:MGI Symbol;Acc:MGI:107877]
70. Smim19 ENSMUSG00000031534 1771 0.769 - 0.769 - - - - small integral membrane protein 19 [Source:MGI Symbol;Acc:MGI:2142501]
71. Xrcc6bp1 389 0.769 - 0.769 - - - - XRCC6 binding protein 1, transcript variant X3
72. Fam118b ENSMUSG00000050471 1916 0.769 - 0.769 - - - - family with sequence similarity 118, member B [Source:MGI Symbol;Acc:MGI:1924483]
73. 5530601H04Rik ENSMUSG00000087174 1849 0.769 - 0.769 - - - - RIKEN cDNA 5530601H04 gene [Source:MGI Symbol;Acc:MGI:1918695]
74. Dach2 ENSMUSG00000025592 622 0.768 - 0.768 - - - - dachshund family transcription factor 2 [Source:MGI Symbol;Acc:MGI:1890446]
75. 1110032A03Rik ENSMUSG00000037971 578 0.768 - 0.768 - - - - RIKEN cDNA 1110032A03 gene [Source:MGI Symbol;Acc:MGI:1915971]
76. St3gal5 ENSMUSG00000056091 1563 0.768 - 0.768 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:1339963]
77. Cul7 ENSMUSG00000038545 1615 0.767 - 0.767 - - - - cullin 7 [Source:MGI Symbol;Acc:MGI:1913765]
78. Arl13b ENSMUSG00000022911 824 0.767 - 0.767 - - - - ADP-ribosylation factor-like 13B [Source:MGI Symbol;Acc:MGI:1915396]
79. Gm13349 ENSMUSG00000082520 302 0.767 - 0.767 - - - - predicted gene 13349 [Source:MGI Symbol;Acc:MGI:3649966]
80. Mocs1 ENSMUSG00000064120 232 0.767 - 0.767 - - - - molybdenum cofactor synthesis 1 [Source:MGI Symbol;Acc:MGI:1928904]
81. Trpc2 ENSMUSG00000100254 1435 0.767 - 0.767 - - - - transient receptor potential cation channel, subfamily C, member 2 [Source:MGI Symbol;Acc:MGI:109527]
82. Pygb ENSMUSG00000033059 1366 0.767 - 0.767 - - - - brain glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97828]
83. Plod3 ENSMUSG00000004846 1917 0.766 - 0.766 - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:MGI Symbol;Acc:MGI:1347008]
84. Slc27a4 ENSMUSG00000059316 1108 0.766 - 0.766 - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:MGI Symbol;Acc:MGI:1347347]
85. Shc2 ENSMUSG00000020312 611 0.766 - 0.766 - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:MGI Symbol;Acc:MGI:106180]
86. Rb1cc1 ENSMUSG00000025907 2187 0.766 - 0.766 - - - - RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
87. Pqlc1 ENSMUSG00000034006 467 0.765 - 0.765 - - - - PQ loop repeat containing 1 [Source:MGI Symbol;Acc:MGI:1914193]
88. Fanca ENSMUSG00000032815 322 0.765 - 0.765 - - - - Fanconi anemia, complementation group A [Source:MGI Symbol;Acc:MGI:1341823]
89. Xrcc5 ENSMUSG00000026187 1592 0.765 - 0.765 - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
90. Srpk1 ENSMUSG00000004865 5361 0.765 - 0.765 - - - - serine/arginine-rich protein specific kinase 1 [Source:MGI Symbol;Acc:MGI:106908]
91. Plcg1 ENSMUSG00000016933 2046 0.765 - 0.765 - - - - phospholipase C, gamma 1 [Source:MGI Symbol;Acc:MGI:97615]
92. Sox7 ENSMUSG00000063060 538 0.765 - 0.765 - - - - SRY (sex determining region Y)-box 7 [Source:MGI Symbol;Acc:MGI:98369]
93. AI597468 AI597468 3278 0.764 - 0.764 - - - -
94. Extl2 ENSMUSG00000027963 931 0.764 - 0.764 - - - - exostoses (multiple)-like 2 [Source:MGI Symbol;Acc:MGI:1889574]
95. P4ha1 ENSMUSG00000019916 1600 0.764 - 0.764 - - - - procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide [Source:MGI Symbol;Acc:MGI:97463]
96. Mrps6 ENSMUSG00000039680 1637 0.764 - 0.764 - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
97. Ccdc137 ENSMUSG00000049957 859 0.764 - 0.764 - - - - coiled-coil domain containing 137 [Source:MGI Symbol;Acc:MGI:1914541]
98. Gnpnat1 ENSMUSG00000037722 795 0.764 - 0.764 - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1858963]
99. Ube2q1 ENSMUSG00000042572 3580 0.763 - 0.763 - - - - ubiquitin-conjugating enzyme E2Q family member 1 [Source:MGI Symbol;Acc:MGI:1917343]
100. Dync1li2 ENSMUSG00000035770 2175 0.762 - 0.762 - - - - dynein, cytoplasmic 1 light intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107738]

There are 136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA