Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rora

Gene Name Gene ID Reads Annotation
Rora ENSMUSG00000032238 241 RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]







Genes with expression patterns similar to Rora

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rora ENSMUSG00000032238 241 6 1.000 1.000 1.000 1.000 1.000 1.000 RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]
2. 4930563E22Rik ENSMUSG00000053574 111 1.532 0.767 0.765 - - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
3. Micall2 ENSMUSG00000036718 130 1.487 - 0.760 - - - 0.727 MICAL-like 2 [Source:MGI Symbol;Acc:MGI:2444818]
4. Tbx4 ENSMUSG00000000094 350 1.447 - 0.717 - - - 0.730 T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
5. Gm6378 ENSMUSG00000062962 7 0.916 0.916 - - - - - predicted pseudogene 6378 [Source:MGI Symbol;Acc:MGI:3647253]
6. Gm9967 ENSMUSG00000055323 7 0.916 0.916 - - - - - predicted gene 9967 [Source:MGI Symbol;Acc:MGI:3704300]
7. Gm11392 ENSMUSG00000097931 7 0.916 0.916 - - - - - predicted gene 11392 [Source:MGI Symbol;Acc:MGI:3649835]
8. Gm13657 ENSMUSG00000086813 15 0.916 0.916 - - - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
9. Tmem170 ENSMUSG00000031953 67 0.915 0.915 - - - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
10. Tlr1 ENSMUSG00000044827 9 0.914 0.914 - - - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
11. Snora75 ENSMUSG00000064837 33 0.914 0.914 - - - - - small nucleolar RNA, H/ACA box 75 [Source:MGI Symbol;Acc:MGI:3819511]
12. Tmem215 ENSMUSG00000046593 29 0.913 0.913 - - - - - transmembrane protein 215 [Source:MGI Symbol;Acc:MGI:2444167]
13. Hps6 ENSMUSG00000074811 74 0.912 0.912 - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
14. Gm14813 ENSMUSG00000082549 69 0.911 0.911 - - - - - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
15. Cpne4 ENSMUSG00000032564 37 0.91 0.910 - - - - - copine IV [Source:MGI Symbol;Acc:MGI:1921270]
16. Snx11 ENSMUSG00000020876 41 0.905 0.905 - - - - - sorting nexin 11 [Source:MGI Symbol;Acc:MGI:1921729]
17. Klhl3 ENSMUSG00000014164 43 0.905 0.905 - - - - - kelch-like 3 [Source:MGI Symbol;Acc:MGI:2445185]
18. BC034090 ENSMUSG00000033722 148 0.9 0.900 - - - - - cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
19. Vgll1 ENSMUSG00000031131 10 0.899 0.899 - - - - - vestigial like family member 1 [Source:MGI Symbol;Acc:MGI:2655768]
20. 1700019G17Rik 1700019G17Rik 54 0.899 0.899 - - - - -
21. Ficd ENSMUSG00000053334 130 0.898 0.898 - - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
22. Map3k6 ENSMUSG00000028862 50 0.896 0.896 - - - - - mitogen-activated protein kinase kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1855691]
23. Tmem63a ENSMUSG00000026519 90 0.894 0.894 - - - - - transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
24. Tmem223 87 0.889 0.889 - - - - - transmembrane protein 223
25. Vps11 ENSMUSG00000032127 317 0.888 0.888 - - - - - VPS11, CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1918982]
26. Mapk13 ENSMUSG00000004864 123 0.887 0.887 - - - - - mitogen-activated protein kinase 13 [Source:MGI Symbol;Acc:MGI:1346864]
27. Slc5a4b ENSMUSG00000020226 35 0.885 0.885 - - - - - solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
28. Prdm10 ENSMUSG00000042496 118 0.885 0.885 - - - - - PR domain containing 10 [Source:MGI Symbol;Acc:MGI:2682952]
29. Itga5 ENSMUSG00000000555 28 0.884 0.884 - - - - - integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]
30. Vti1a ENSMUSG00000024983 189 0.883 0.883 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
31. Enpp1 ENSMUSG00000037370 109 0.882 0.882 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:97370]
32. Tax1bp3 ENSMUSG00000040158 23 0.876 0.876 - - - - - Tax1 (human T cell leukemia virus type I) binding protein 3 [Source:MGI Symbol;Acc:MGI:1923531]
33. E430024P14Rik ENSMUSG00000090069 38 0.876 0.876 - - - - - RIKEN cDNA E430024P14 gene [Source:MGI Symbol;Acc:MGI:2445079]
34. Fgf18 ENSMUSG00000057967 46 0.874 0.874 - - - - - fibroblast growth factor 18 [Source:MGI Symbol;Acc:MGI:1277980]
35. Dyrk1b ENSMUSG00000002409 201 0.873 0.873 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
36. Gm10226 ENSMUSG00000067929 43 0.869 0.869 - - - - - predicted gene 10226 [Source:MGI Symbol;Acc:MGI:3704470]
37. Helq ENSMUSG00000035266 104 0.869 0.869 - - - - - helicase, POLQ-like [Source:MGI Symbol;Acc:MGI:2176740]
38. Acer3 ENSMUSG00000030760 598 0.867 0.867 - - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
39. Klc4 ENSMUSG00000003546 293 0.867 0.867 - - - - - kinesin light chain 4 [Source:MGI Symbol;Acc:MGI:1922014]
40. 1110020A21Rik ENSMUSG00000097047 49 0.863 0.863 - - - - - RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
41. Fam189a2 ENSMUSG00000071604 71 0.859 0.859 - - - - - family with sequence similarity 189, member A2 [Source:MGI Symbol;Acc:MGI:2685813]
42. Asz1 ENSMUSG00000010796 17 0.858 0.858 - - - - - ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:MGI Symbol;Acc:MGI:1921318]
43. Jdp2 ENSMUSG00000034271 175 0.857 0.857 - - - - - Jun dimerization protein 2 [Source:MGI Symbol;Acc:MGI:1932093]
44. Cygb ENSMUSG00000020810 417 0.853 0.853 - - - - - cytoglobin [Source:MGI Symbol;Acc:MGI:2149481]
45. Chpf2 ENSMUSG00000038181 62 0.853 0.853 - - - - - chondroitin polymerizing factor 2 [Source:MGI Symbol;Acc:MGI:1917522]
46. Fam45a ENSMUSG00000024993 389 0.85 0.850 - - - - - family with sequence similarity 45, member A [Source:MGI Symbol;Acc:MGI:1915144]
47. Gm24576 ENSMUSG00000093249 66 0.85 0.850 - - - - - predicted gene, 24576 [Source:MGI Symbol;Acc:MGI:5454353]
48. Gm7452 ENSMUSG00000107310 296 0.848 0.848 - - - - - predicted pseudogene 7452 [Source:MGI Symbol;Acc:MGI:3645151]
49. Fam228a ENSMUSG00000079177 14 0.845 0.845 - - - - - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
50. Hyal3 ENSMUSG00000036091 127 0.838 0.838 - - - - - hyaluronoglucosaminidase 3 [Source:MGI Symbol;Acc:MGI:1330288]
51. Ephx1 ENSMUSG00000038776 79 0.837 0.837 - - - - - epoxide hydrolase 1, microsomal [Source:MGI Symbol;Acc:MGI:95405]
52. Maats1 ENSMUSG00000022805 60 0.835 0.835 - - - - - MYCBP-associated, testis expressed 1 [Source:MGI Symbol;Acc:MGI:2443598]
53. Gabra1 ENSMUSG00000010803 177 0.835 0.835 - - - - - gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
54. Col9a2 ENSMUSG00000028626 672 0.834 0.834 - - - - - collagen, type IX, alpha 2 [Source:MGI Symbol;Acc:MGI:88466]
55. Tmub1 ENSMUSG00000028958 444 0.832 0.832 - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
56. Gm26590 ENSMUSG00000097533 53 0.828 0.828 - - - - - predicted gene, 26590 [Source:MGI Symbol;Acc:MGI:5477084]
57. Prkar1b ENSMUSG00000025855 360 0.827 0.827 - - - - - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
58. Lbp ENSMUSG00000016024 157 0.827 0.827 - - - - - lipopolysaccharide binding protein [Source:MGI Symbol;Acc:MGI:1098776]
59. Ap1s3 ENSMUSG00000054702 166 0.826 0.826 - - - - - adaptor-related protein complex AP-1, sigma 3 [Source:MGI Symbol;Acc:MGI:1891304]
60. Tmem69 ENSMUSG00000055900 851 0.826 0.826 - - - - - transmembrane protein 69 [Source:MGI Symbol;Acc:MGI:3045357]
61. A730071L15Rik ENSMUSG00000096923 22 0.825 0.825 - - - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
62. Slc16a13 ENSMUSG00000044367 191 0.824 - - - - - 0.824 solute carrier family 16 (monocarboxylic acid transporters), member 13 [Source:MGI Symbol;Acc:MGI:1916559]
63. Map7 ENSMUSG00000019996 135 0.823 0.823 - - - - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
64. Sec22c ENSMUSG00000061536 764 0.823 0.823 - - - - - SEC22 homolog C, vesicle trafficking protein [Source:MGI Symbol;Acc:MGI:2447871]
65. Hist1h2ai ENSMUSG00000071516 101 0.822 0.822 - - - - - histone cluster 1, H2ai [Source:MGI Symbol;Acc:MGI:2448457]
66. Atg4c ENSMUSG00000028550 266 0.82 0.820 - - - - - autophagy related 4C, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2651854]
67. Gm6222 ENSMUSG00000083019 145 0.819 0.819 - - - - - predicted pseudogene 6222 [Source:MGI Symbol;Acc:MGI:3648722]
68. Gm4462 ENSMUSG00000090319 36 0.818 0.818 - - - - - predicted gene 4462 [Source:MGI Symbol;Acc:MGI:3782646]
69. Zfp418 ENSMUSG00000034538 151 0.817 0.817 - - - - - zinc finger protein 418 [Source:MGI Symbol;Acc:MGI:2444763]
70. Dand5 ENSMUSG00000053226 128 0.815 0.815 - - - - - DAN domain family member 5, BMP antagonist [Source:MGI Symbol;Acc:MGI:1344365]
71. Gm24187 ENSMUSG00000088609 210 0.812 - - - - - 0.812 predicted gene, 24187 [Source:MGI Symbol;Acc:MGI:5453964]
72. Enthd2 271 0.808 - - - - - 0.808 ENTH domain containing 2, transcript variant X3
73. Lnpep ENSMUSG00000023845 48 0.807 - 0.807 - - - - leucyl/cystinyl aminopeptidase [Source:MGI Symbol;Acc:MGI:2387123]
74. Ankrd13d ENSMUSG00000005986 96 0.807 0.807 - - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
75. Rem2 ENSMUSG00000022176 171 0.807 0.807 - - - - - rad and gem related GTP binding protein 2 [Source:MGI Symbol;Acc:MGI:2155260]
76. Zfp11 ENSMUSG00000051034 218 0.806 0.806 - - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
77. Sptlc1 ENSMUSG00000021468 2614 0.804 0.804 - - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:MGI Symbol;Acc:MGI:1099431]
78. Dnajb3 ENSMUSG00000081984 495 0.803 0.803 - - - - - DnaJ heat shock protein family (Hsp40) member B3 [Source:MGI Symbol;Acc:MGI:1306822]
79. Stard9 ENSMUSG00000033705 470 0.801 0.801 - - - - - START domain containing 9 [Source:MGI Symbol;Acc:MGI:3045258]
80. Psen1 ENSMUSG00000019969 1231 0.798 - - - - - 0.798 presenilin 1 [Source:MGI Symbol;Acc:MGI:1202717]
81. Vamp5 ENSMUSG00000073002, ENSMUSG00000102671 369 0.797 0.797 - - - - - vesicle-associated membrane protein 5 [Source:MGI Symbol;Acc:MGI:1858622]
82. Pik3cd ENSMUSG00000039936 287 0.797 - - - - - 0.797 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:MGI Symbol;Acc:MGI:1098211]
83. Rnf13 ENSMUSG00000036503 649 0.796 0.796 - - - - - ring finger protein 13 [Source:MGI Symbol;Acc:MGI:1346341]
84. Mgll ENSMUSG00000033174 157 0.795 0.795 - - - - - monoglyceride lipase [Source:MGI Symbol;Acc:MGI:1346042]
85. C330006A16Rik 426 0.795 - - - - - 0.795 RIKEN cDNA C330006A16 gene, transcript variant 2
86. Mcmdc2 ENSMUSG00000046101 117 0.795 - - - - - 0.795 minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
87. Acyp2 ENSMUSG00000060923 79 0.794 - - - - - 0.794 acylphosphatase 2, muscle type [Source:MGI Symbol;Acc:MGI:1922822]
88. Angel1 ENSMUSG00000021257 191 0.793 0.793 - - - - - angel homolog 1 [Source:MGI Symbol;Acc:MGI:1915987]
89. Gm15843 ENSMUSG00000085812 90 0.792 - - - - - 0.792 predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
90. Nlrp5 ENSMUSG00000015721 71 0.79 - - - - - 0.790 NLR family, pyrin domain containing 5 [Source:MGI Symbol;Acc:MGI:1345193]
91. Fam83a ENSMUSG00000051225, ENSMUSG00000116387 119 0.79 0.790 - - - - - family with sequence similarity 83, member A [Source:MGI Symbol;Acc:MGI:2447773]
92. Slc8a1 ENSMUSG00000054640 12 0.788 0.788 - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
93. Cftr ENSMUSG00000041301 43 0.788 - - - - - 0.788 cystic fibrosis transmembrane conductance regulator [Source:MGI Symbol;Acc:MGI:88388]
94. Acsm2 ENSMUSG00000030945 31 0.787 - - - - - 0.787 acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
95. Gm17029 ENSMUSG00000086740 26 0.786 - - - - - 0.786 predicted gene 17029 [Source:MGI Symbol;Acc:MGI:4937856]
96. Surf2 ENSMUSG00000014873 372 0.786 - - - - - 0.786 surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
97. Gm6023 ENSMUSG00000081159 42 0.786 - - - - - 0.786 predicted gene 6023 [Source:MGI Symbol;Acc:MGI:3645815]
98. Gm16200 ENSMUSG00000081520 19 0.786 - - - - - 0.786 predicted gene 16200 [Source:MGI Symbol;Acc:MGI:3801928]
99. Gm12680 Gm12680 20 0.786 - - - - - 0.786
100. Gm11809 ENSMUSG00000082122 13 0.786 - - - - - 0.786 predicted gene 11809 [Source:MGI Symbol;Acc:MGI:3650709]

There are 168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA