Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rnu11

Gene Name Gene ID Reads Annotation
Rnu11 ENSMUSG00000077323 50 U11 small nuclear RNA [Source:MGI Symbol;Acc:MGI:2148804]







Genes with expression patterns similar to Rnu11

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rnu11 ENSMUSG00000077323 50 5 - 1.000 1.000 1.000 1.000 1.000 U11 small nuclear RNA [Source:MGI Symbol;Acc:MGI:2148804]
2. Csn3 ENSMUSG00000001622 90 1.66 - - - - 0.861 0.799 casein kappa [Source:MGI Symbol;Acc:MGI:107461]
3. Ttll9 ENSMUSG00000074673 21 0.91 - - - - 0.910 - tubulin tyrosine ligase-like family, member 9 [Source:MGI Symbol;Acc:MGI:1913589]
4. Gm9530 ENSMUSG00000096950 38 0.903 - - - - 0.903 - predicted gene 9530 [Source:MGI Symbol;Acc:MGI:3779939]
5. Phf1 ENSMUSG00000024193 65 0.902 - - - - 0.902 - PHD finger protein 1 [Source:MGI Symbol;Acc:MGI:98647]
6. Fam71e1 ENSMUSG00000051113 33 0.9 - - - - 0.900 - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
7. 5730460C07Rik ENSMUSG00000062046 10 0.892 - - - - 0.892 - RIKEN cDNA 5730460C07 gene [Source:MGI Symbol;Acc:MGI:1917844]
8. Gm17034 ENSMUSG00000090293 10 0.892 - - - - 0.892 - predicted gene 17034 [Source:MGI Symbol;Acc:MGI:4937861]
9. Snora15 ENSMUSG00000093413 13 0.892 - - - - 0.892 - small nucleolar RNA, H/ACA box 15 [Source:MGI Symbol;Acc:MGI:3819490]
10. Cd37 ENSMUSG00000030798 29 0.889 - - - - 0.889 - CD37 antigen [Source:MGI Symbol;Acc:MGI:88330]
11. Cd79a ENSMUSG00000003379 33 0.888 - - - - 0.888 - CD79A antigen (immunoglobulin-associated alpha) [Source:MGI Symbol;Acc:MGI:101774]
12. Gm7429 ENSMUSG00000082260 31 0.888 - - - - 0.888 - predicted pseudogene 7429 [Source:MGI Symbol;Acc:MGI:3647718]
13. Diras2 ENSMUSG00000047842 90 0.887 - - - - 0.887 - DIRAS family, GTP-binding RAS-like 2 [Source:MGI Symbol;Acc:MGI:1915453]
14. Gm6155 ENSMUSG00000068629 16 0.887 - - - - 0.887 - predicted pseudogene 6155 [Source:MGI Symbol;Acc:MGI:3643981]
15. Lynx1 ENSMUSG00000022594 33 0.886 - - - - - 0.886 Ly6/neurotoxin 1 [Source:MGI Symbol;Acc:MGI:1345180]
16. Dmbx1 ENSMUSG00000028707 18 0.886 - - - - 0.886 - diencephalon/mesencephalon homeobox 1 [Source:MGI Symbol;Acc:MGI:2153518]
17. 2510046G10Rik ENSMUSG00000066175 41 0.885 - - - - 0.885 - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
18. Abcc3 ENSMUSG00000020865 75 0.885 - - - - - 0.885 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:MGI Symbol;Acc:MGI:1923658]
19. 6530401F13Rik ENSMUSG00000091947 13 0.885 - - - - 0.885 - RIKEN cDNA 6530401F13 gene [Source:MGI Symbol;Acc:MGI:1923491]
20. 4930430E12Rik ENSMUSG00000085295 30 0.882 - - - - 0.882 - RIKEN cDNA 4930430E12 gene [Source:MGI Symbol;Acc:MGI:1918889]
21. Gm5937 ENSMUSG00000081622 17 0.882 - - - - 0.882 - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
22. Htr3b ENSMUSG00000008590 22 0.881 - - - - 0.881 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:MGI Symbol;Acc:MGI:1861899]
23. 2310042E22Rik 2310042E22Rik 17 0.881 - - - - 0.881 -
24. Gm15905 ENSMUSG00000085993 17 0.881 - - - - 0.881 - predicted gene 15905 [Source:MGI Symbol;Acc:MGI:3802059]
25. Foxr1 ENSMUSG00000074397 30 0.881 - - - - 0.881 - forkhead box R1 [Source:MGI Symbol;Acc:MGI:2685961]
26. Hist1h2ab ENSMUSG00000061615 94 0.88 - - - - 0.880 - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
27. 1700024N20Rik 1700024N20Rik 5 0.878 - - - - - 0.878
28. Slc27a5 ENSMUSG00000030382 5 0.878 - - - - - 0.878 solute carrier family 27 (fatty acid transporter), member 5 [Source:MGI Symbol;Acc:MGI:1347100]
29. Daf2 Daf2 5 0.878 - - - - - 0.878
30. Cdkn2a ENSMUSG00000044303 4 0.878 - - - - - 0.878 cyclin dependent kinase inhibitor 2A [Source:MGI Symbol;Acc:MGI:104738]
31. Gm13051 6 0.878 - - - - - 0.878 predicted gene 13051
32. AU022751 ENSMUSG00000073294 4 0.878 - - - - - 0.878 expressed sequence AU022751 [Source:MGI Symbol;Acc:MGI:2147968]
33. Sycn ENSMUSG00000084174 13 0.878 - - - - - 0.878 syncollin [Source:MGI Symbol;Acc:MGI:1915666]
34. Lrrc32 ENSMUSG00000090958 175 0.874 - - - - 0.874 - leucine rich repeat containing 32 [Source:MGI Symbol;Acc:MGI:93882]
35. Snta1 ENSMUSG00000027488 128 0.874 - - - - 0.874 - syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
36. Plekhd1 ENSMUSG00000066438 23 0.87 - - - - - 0.870 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:MGI Symbol;Acc:MGI:3036228]
37. A330041J22Rik ENSMUSG00000087466 10 0.87 - - - - - 0.870 RIKEN cDNA A330041J22 gene [Source:MGI Symbol;Acc:MGI:2442269]
38. Kcnn2 ENSMUSG00000054477 37 0.87 - - - - 0.870 - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 [Source:MGI Symbol;Acc:MGI:2153182]
39. Rps6ka5 ENSMUSG00000021180 94 0.869 - - - - 0.869 - ribosomal protein S6 kinase, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1920336]
40. Aldob ENSMUSG00000028307 11 0.869 - - - - - 0.869 aldolase B, fructose-bisphosphate [Source:MGI Symbol;Acc:MGI:87995]
41. Sorcs3 ENSMUSG00000063434 109 0.868 - - - - 0.868 - sortilin-related VPS10 domain containing receptor 3 [Source:MGI Symbol;Acc:MGI:1913923]
42. AU018091 ENSMUSG00000054753, ENSMUSG00000107871 10 0.867 - - - - - 0.867 expressed sequence AU018091 [Source:MGI Symbol;Acc:MGI:2142124]
43. Lmbrd2 ENSMUSG00000039704, ENSMUSG00000116236 49 0.867 - - - - 0.867 - LMBR1 domain containing 2 [Source:NCBI gene;Acc:320506]
44. Stpg1 ENSMUSG00000028801 5 0.867 - - - - - 0.867 sperm tail PG rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:1926056]
45. Ppp3r2 ENSMUSG00000028310 20 0.866 - - - - 0.866 - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) [Source:MGI Symbol;Acc:MGI:107171]
46. Ephx2 ENSMUSG00000022040 157 0.866 - - - - 0.866 - epoxide hydrolase 2, cytoplasmic [Source:MGI Symbol;Acc:MGI:99500]
47. Ntsr1 ENSMUSG00000027568 69 0.865 - - - - 0.865 - neurotensin receptor 1 [Source:MGI Symbol;Acc:MGI:97386]
48. 1700013G23Rik 1700013G23Rik 24 0.864 - - - - - 0.864
49. 1700049G17Rik 282 0.862 - - - - 0.862 - RIKEN cDNA 1700049G17 gene
50. Gm22388 ENSMUSG00000088819 259 0.861 - - - - 0.861 - predicted gene, 22388 [Source:MGI Symbol;Acc:MGI:5452165]
51. Agtr1a ENSMUSG00000049115 80 0.86 - - - - 0.860 - angiotensin II receptor, type 1a [Source:MGI Symbol;Acc:MGI:87964]
52. Gm9797 ENSMUSG00000045455 43 0.86 - - - - 0.860 - predicted pseudogene 9797 [Source:MGI Symbol;Acc:MGI:3704349]
53. Ctla2b ENSMUSG00000074874 66 0.86 - - - - 0.860 - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
54. Grin2d ENSMUSG00000002771 119 0.859 - - - - 0.859 - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
55. 2010012P19Rik 2010012P19Rik 39 0.859 - - - - 0.859 -
56. BC027582 BC027582 61 0.857 - - - - - 0.857
57. Pde6g ENSMUSG00000025386 23 0.855 - - - - - 0.855 phosphodiesterase 6G, cGMP-specific, rod, gamma [Source:MGI Symbol;Acc:MGI:97526]
58. Rhpn1 ENSMUSG00000022580 76 0.855 - - - - 0.855 - rhophilin, Rho GTPase binding protein 1 [Source:MGI Symbol;Acc:MGI:1098783]
59. BC042782 BC042782 63 0.852 - - - - - 0.852
60. Fam83g ENSMUSG00000042377 44 0.851 - - - - 0.851 - family with sequence similarity 83, member G [Source:MGI Symbol;Acc:MGI:1916890]
61. 1810014B01Rik ENSMUSG00000097412 129 0.85 - - - - 0.850 - RIKEN cDNA 1810014B01 gene [Source:MGI Symbol;Acc:MGI:1913513]
62. Lbx2 ENSMUSG00000034968 11 0.848 - - - - - 0.848 ladybird homeobox 2 [Source:MGI Symbol;Acc:MGI:1342288]
63. Mx2 ENSMUSG00000023341 6 0.847 - - - - - 0.847 MX dynamin-like GTPase 2 [Source:MGI Symbol;Acc:MGI:97244]
64. Arhgap15 ENSMUSG00000049744 40 0.846 - - - - - 0.846 Rho GTPase activating protein 15 [Source:MGI Symbol;Acc:MGI:1923367]
65. A430106G13Rik ENSMUSG00000098206 93 0.846 - - - - 0.846 - RIKEN cDNA A430106G13 gene [Source:MGI Symbol;Acc:MGI:2443823]
66. Dus1l ENSMUSG00000025155 491 0.843 - - - - 0.843 - dihydrouridine synthase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915980]
67. Gm8991 ENSMUSG00000059179 90 0.842 - - - - 0.842 - predicted pseudogene 8991 [Source:MGI Symbol;Acc:MGI:3644227]
68. Mfsd7b 498 0.841 - - - - 0.841 - major facilitator superfamily domain containing 7B, transcript variant X1
69. Ogfod2 ENSMUSG00000023707 139 0.84 - - - - 0.840 - 2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:MGI Symbol;Acc:MGI:1913877]
70. 4930563E22Rik ENSMUSG00000053574 111 0.839 - - - - - 0.839 RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
71. Cst9 ENSMUSG00000027445 44 0.839 - - - - - 0.839 cystatin 9 [Source:MGI Symbol;Acc:MGI:1340053]
72. Gm10719 ENSMUSG00000095547 349 0.839 - - - - 0.839 - predicted gene 10719 [Source:MGI Symbol;Acc:MGI:3641690]
73. Gm11939 ENSMUSG00000078132 8 0.838 - - 0.838 - - - predicted gene 11939 [Source:MGI Symbol;Acc:MGI:3651443]
74. Gfra2 ENSMUSG00000022103 94 0.838 - - - - - 0.838 glial cell line derived neurotrophic factor family receptor alpha 2 [Source:MGI Symbol;Acc:MGI:1195462]
75. 2210417K05Rik 2210417K05Rik 42 0.837 - - - - 0.837 -
76. Gm7976 ENSMUSG00000097551 58 0.833 - - - - 0.833 - predicted gene 7976 [Source:MGI Symbol;Acc:MGI:3644736]
77. Zkscan6 ENSMUSG00000018347 182 0.832 - - - - 0.832 - zinc finger with KRAB and SCAN domains 6 [Source:MGI Symbol;Acc:MGI:1289293]
78. Fabp2 ENSMUSG00000023057 10 0.832 - - - - - 0.832 fatty acid binding protein 2, intestinal [Source:MGI Symbol;Acc:MGI:95478]
79. F10 ENSMUSG00000031444 51 0.831 - - - - 0.831 - coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]
80. Sema3e ENSMUSG00000063531 67 0.83 - - - - 0.830 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:MGI Symbol;Acc:MGI:1340034]
81. 5430403G16Rik ENSMUSG00000072763 285 0.828 - - - - 0.828 - RIKEN cDNA 5430403G16 gene [Source:MGI Symbol;Acc:MGI:1924450]
82. 2010015M23Rik ENSMUSG00000096983, ENSMUSG00000102444 131 0.828 - - - - 0.828 - RIKEN cDNA 2010015M23 gene [Source:MGI Symbol;Acc:MGI:1919337]
83. Cdkl3 ENSMUSG00000020389 289 0.826 - - - - 0.826 - cyclin-dependent kinase-like 3 [Source:MGI Symbol;Acc:MGI:2388268]
84. Tnni2 ENSMUSG00000031097 62 0.826 - - - - - 0.826 troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
85. Phf15 Phf15 132 0.826 - - - - 0.826 -
86. Metrnl ENSMUSG00000039208 66 0.824 - - - - 0.824 - meteorin, glial cell differentiation regulator-like [Source:MGI Symbol;Acc:MGI:2384806]
87. Socs1 ENSMUSG00000038037 487 0.824 - - - - 0.824 - suppressor of cytokine signaling 1 [Source:MGI Symbol;Acc:MGI:1354910]
88. Carm1 ENSMUSG00000032185 70 0.824 - - - - - 0.824 coactivator-associated arginine methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913208]
89. Plk2 ENSMUSG00000021701 1249 0.824 - - - - 0.824 - polo like kinase 2 [Source:MGI Symbol;Acc:MGI:1099790]
90. Cib2 ENSMUSG00000037493 166 0.821 - - - - 0.821 - calcium and integrin binding family member 2 [Source:MGI Symbol;Acc:MGI:1929293]
91. Igf2os ENSMUSG00000086266 230 0.819 - - - - 0.819 - insulin-like growth factor 2, opposite strand [Source:MGI Symbol;Acc:MGI:1195257]
92. Gm15915 ENSMUSG00000085723 101 0.818 - - - - 0.818 - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
93. Arhgap25 ENSMUSG00000030047 123 0.815 - - - - 0.815 - Rho GTPase activating protein 25 [Source:MGI Symbol;Acc:MGI:2443687]
94. Gm26881 ENSMUSG00000096974 31 0.814 - - - - - 0.814 predicted gene, 26881 [Source:MGI Symbol;Acc:MGI:5477375]
95. Stam2 ENSMUSG00000055371 1123 0.812 - - - - 0.812 - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:MGI Symbol;Acc:MGI:1929100]
96. Cdadc1 ENSMUSG00000021982 515 0.802 - - - - 0.802 - cytidine and dCMP deaminase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919141]
97. Nadsyn1 ENSMUSG00000031090 127 0.8 - - - - - 0.800 NAD synthetase 1 [Source:MGI Symbol;Acc:MGI:1926164]
98. Wnt9a ENSMUSG00000000126 90 0.799 - - - - 0.799 - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
99. Gas8 ENSMUSG00000040220 1218 0.797 - - - - 0.797 - growth arrest specific 8 [Source:MGI Symbol;Acc:MGI:1202386]
100. Gpr20 ENSMUSG00000045281 159 0.794 - - - - 0.794 - G protein-coupled receptor 20 [Source:MGI Symbol;Acc:MGI:2441803]

There are 158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA