Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rnf39

Gene Name Gene ID Reads Annotation
Rnf39 ENSMUSG00000036492 6 ring finger protein 39 [Source:MGI Symbol;Acc:MGI:2156378]







Genes with expression patterns similar to Rnf39

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rnf39 ENSMUSG00000036492 6 2 1.000 - - - - 1.000 ring finger protein 39 [Source:MGI Symbol;Acc:MGI:2156378]
2. Snora33 ENSMUSG00000070063 12 1.64 0.720 - - - - 0.920 small nucleolar RNA, H/ACA box 33 [Source:MGI Symbol;Acc:MGI:3819501]
3. Papolb ENSMUSG00000074817 23 1.44 0.705 - - - - 0.735 poly (A) polymerase beta (testis specific) [Source:MGI Symbol;Acc:MGI:1932115]
4. Zfp957 ENSMUSG00000071262 2 1 1.000 - - - - - zinc finger protein 957 [Source:MGI Symbol;Acc:MGI:2145729]
5. RP23-292F17.6 RP23-292F17.6 2 1 1.000 - - - - -
6. Olfr1124 ENSMUSG00000050772 3 1 1.000 - - - - - olfactory receptor 1124 [Source:MGI Symbol;Acc:MGI:3030958]
7. Gm17106 ENSMUSG00000078489 3 1 1.000 - - - - - predicted gene 17106 [Source:MGI Symbol;Acc:MGI:4937933]
8. Gm5494 Gm5494 2 1 1.000 - - - - -
9. Krt82 ENSMUSG00000049548 2 1 1.000 - - - - - keratin 82 [Source:MGI Symbol;Acc:MGI:2149248]
10. 4933435F18Rik ENSMUSG00000086978 6 1 1.000 - - - - - RIKEN cDNA 4933435F18 gene [Source:MGI Symbol;Acc:MGI:1918570]
11. 2310043D23Rik 2310043D23Rik 2 1 1.000 - - - - -
12. Gm1043 ENSMUSG00000117286 2 1 1.000 - - - - - predicted 1043 [Source:NCBI gene;Acc:381634]
13. Gm12069 ENSMUSG00000086439 4 1 1.000 - - - - - predicted gene 12069 [Source:MGI Symbol;Acc:MGI:3649875]
14. Gm17102 ENSMUSG00000091864 6 1 1.000 - - - - - predicted gene 17102 [Source:MGI Symbol;Acc:MGI:4937929]
15. Aoc1 ENSMUSG00000029811 4 1 1.000 - - - - - amine oxidase, copper-containing 1 [Source:MGI Symbol;Acc:MGI:1923757]
16. Atg9b ENSMUSG00000038295 10 1 1.000 - - - - - autophagy related 9B [Source:MGI Symbol;Acc:MGI:2685420]
17. AV039307 ENSMUSG00000087519 4 1 - - - - - 1.000 expressed sequence AV039307 [Source:MGI Symbol;Acc:MGI:2139243]
18. Gm4558 ENSMUSG00000108944 2 1 1.000 - - - - - predicted gene 4558 [Source:MGI Symbol;Acc:MGI:3782742]
19. Gm14987 ENSMUSG00000083920 2 1 1.000 - - - - - predicted gene 14987 [Source:MGI Symbol;Acc:MGI:3705432]
20. Aire ENSMUSG00000000731 3 1 1.000 - - - - - autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy) [Source:MGI Symbol;Acc:MGI:1338803]
21. Gm12932 ENSMUSG00000086342 2 1 1.000 - - - - - predicted gene 12932 [Source:MGI Symbol;Acc:MGI:3651151]
22. Fam178b ENSMUSG00000046337 17 1 1.000 - - - - - family with sequence similarity 178, member B [Source:MGI Symbol;Acc:MGI:3026913]
23. Csrp3 ENSMUSG00000030470 8 1 1.000 - - - - - cysteine and glycine-rich protein 3 [Source:MGI Symbol;Acc:MGI:1330824]
24. Gm15845 ENSMUSG00000087689 9 1 1.000 - - - - - predicted gene 15845 [Source:MGI Symbol;Acc:MGI:3801825]
25. Gm9881 5 1 1.000 - - - - - predicted gene 9881
26. Gm20445 ENSMUSG00000092394 3 1 1.000 - - - - - predicted gene 20445 [Source:MGI Symbol;Acc:MGI:5141910]
27. Gm26604 ENSMUSG00000097079 11 1 1.000 - - - - - predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
28. 4930538E20Rik ENSMUSG00000085516 2 1 1.000 - - - - - RIKEN cDNA 4930538E20 gene [Source:MGI Symbol;Acc:MGI:1925450]
29. D630023F18Rik ENSMUSG00000044816 9 1 1.000 - - - - - RIKEN cDNA D630023F18 gene [Source:MGI Symbol;Acc:MGI:2138198]
30. 9130230N09Rik ENSMUSG00000092626 12 1 1.000 - - - - - RIKEN cDNA 9130230N09 gene [Source:MGI Symbol;Acc:MGI:1924921]
31. Nodal ENSMUSG00000037171 6 1 1.000 - - - - - nodal [Source:MGI Symbol;Acc:MGI:97359]
32. Gm15798 ENSMUSG00000083658 4 1 1.000 - - - - - predicted gene 15798 [Source:MGI Symbol;Acc:MGI:3802099]
33. Gm10619 ENSMUSG00000074067 3 1 1.000 - - - - - predicted gene 10619 [Source:MGI Symbol;Acc:MGI:3708756]
34. Gm6277 ENSMUSG00000097440 14 0.997 0.997 - - - - - predicted gene 6277 [Source:MGI Symbol;Acc:MGI:3779583]
35. Bpifa2 ENSMUSG00000042459 6 0.988 0.988 - - - - - BPI fold containing family A, member 2 [Source:MGI Symbol;Acc:MGI:97787]
36. Htr5b ENSMUSG00000050534 4 0.988 0.988 - - - - - 5-hydroxytryptamine (serotonin) receptor 5B [Source:MGI Symbol;Acc:MGI:96284]
37. Gm14121 ENSMUSG00000083325 4 0.978 - - - - - 0.978 predicted gene 14121 [Source:MGI Symbol;Acc:MGI:3651769]
38. Rbl2 ENSMUSG00000031666 25 0.978 - - - - - 0.978 RB transcriptional corepressor like 2 [Source:MGI Symbol;Acc:MGI:105085]
39. Mobp ENSMUSG00000032517 11 0.978 - - - - - 0.978 myelin-associated oligodendrocytic basic protein [Source:MGI Symbol;Acc:MGI:108511]
40. Gm12492 ENSMUSG00000081329 10 0.978 - - - - - 0.978 predicted gene 12492 [Source:MGI Symbol;Acc:MGI:3651196]
41. Kif2b ENSMUSG00000046755 2 0.978 - - - - - 0.978 kinesin family member 2B [Source:MGI Symbol;Acc:MGI:1920720]
42. Gm9921 ENSMUSG00000092404 4 0.978 - - - - - 0.978 predicted gene 9921 [Source:MGI Symbol;Acc:MGI:3642033]
43. Gm11663 ENSMUSG00000082706 7 0.978 - - - - - 0.978 predicted gene 11663 [Source:MGI Symbol;Acc:MGI:3651529]
44. Gm11128 Gm11128 17 0.978 - - - - - 0.978
45. Tnfrsf9 ENSMUSG00000028965 7 0.978 - - - - - 0.978 tumor necrosis factor receptor superfamily, member 9 [Source:MGI Symbol;Acc:MGI:1101059]
46. Macc1 ENSMUSG00000041886 16 0.978 - - - - - 0.978 metastasis associated in colon cancer 1 [Source:MGI Symbol;Acc:MGI:2685113]
47. Tomm40l ENSMUSG00000005674 4 0.978 - - - - - 0.978 translocase of outer mitochondrial membrane 40-like [Source:MGI Symbol;Acc:MGI:3589112]
48. Gm14521 ENSMUSG00000083486 3 0.978 - - - - - 0.978 predicted gene 14521 [Source:MGI Symbol;Acc:MGI:3705887]
49. Scnn1g ENSMUSG00000000216 14 0.976 0.976 - - - - - sodium channel, nonvoltage-gated 1 gamma [Source:MGI Symbol;Acc:MGI:104695]
50. Sh2d2a ENSMUSG00000028071 8 0.975 0.975 - - - - - SH2 domain containing 2A [Source:MGI Symbol;Acc:MGI:1351596]
51. Dynlt1b ENSMUSG00000096255 5 0.975 0.975 - - - - - dynein light chain Tctex-type 1B [Source:MGI Symbol;Acc:MGI:98643]
52. Lhcgr ENSMUSG00000024107 5 0.969 - - - - - 0.969 luteinizing hormone/choriogonadotropin receptor [Source:MGI Symbol;Acc:MGI:96783]
53. Mmp12 ENSMUSG00000049723 18 0.968 0.968 - - - - - matrix metallopeptidase 12 [Source:MGI Symbol;Acc:MGI:97005]
54. Aox4 ENSMUSG00000038242 18 0.966 - - - - - 0.966 aldehyde oxidase 4 [Source:MGI Symbol;Acc:MGI:1919122]
55. Il10ra ENSMUSG00000032089 13 0.964 0.964 - - - - - interleukin 10 receptor, alpha [Source:MGI Symbol;Acc:MGI:96538]
56. Smt3h2-ps ENSMUSG00000082617 57 0.96 0.960 - - - - - SMT3 suppressor of mif two 3 homolog 2, pseudogene (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1859622]
57. Arsb ENSMUSG00000042082 30 0.958 0.958 - - - - - arylsulfatase B [Source:MGI Symbol;Acc:MGI:88075]
58. C630004M23Rik ENSMUSG00000103570 13 0.955 0.955 - - - - - RIKEN cDNA C630004M23 gene [Source:MGI Symbol;Acc:MGI:3642399]
59. Gm10324 ENSMUSG00000095909 10 0.955 0.955 - - - - - predicted gene 10324 [Source:MGI Symbol;Acc:MGI:3642406]
60. Gm11196 ENSMUSG00000082110 7 0.955 0.955 - - - - - predicted gene 11196 [Source:MGI Symbol;Acc:MGI:3649463]
61. Tfpi2 ENSMUSG00000029664 31 0.952 0.952 - - - - - tissue factor pathway inhibitor 2 [Source:MGI Symbol;Acc:MGI:108543]
62. Gm3200 ENSMUSG00000097388 8 0.95 - - - - - 0.950 predicted pseudogene 3200 [Source:MGI Symbol;Acc:MGI:3781379]
63. 4930455G09Rik ENSMUSG00000085761, ENSMUSG00000116484 12 0.948 - - - - - 0.948 RIKEN cDNA 4930455G09 gene [Source:MGI Symbol;Acc:MGI:1926167]
64. A730081D07Rik ENSMUSG00000086693 16 0.948 - - - - - 0.948 RIKEN cDNA A730081D07 gene [Source:MGI Symbol;Acc:MGI:2441825]
65. Gm11531 ENSMUSG00000075587 27 0.948 - - - - - 0.948 predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
66. Igsf6 ENSMUSG00000035004 28 0.946 0.946 - - - - - immunoglobulin superfamily, member 6 [Source:MGI Symbol;Acc:MGI:1891393]
67. Plcd3 ENSMUSG00000020937 43 0.943 0.943 - - - - - phospholipase C, delta 3 [Source:MGI Symbol;Acc:MGI:107451]
68. Btla ENSMUSG00000052013 8 0.941 - - - - - 0.941 B and T lymphocyte associated [Source:MGI Symbol;Acc:MGI:2658978]
69. Gm12517 ENSMUSG00000081499 3 0.94 0.940 - - - - - predicted gene 12517 [Source:MGI Symbol;Acc:MGI:3649535]
70. 4932411N23Rik ENSMUSG00000058670 7 0.937 0.937 - - - - - RIKEN cDNA 4932411N23 gene [Source:MGI Symbol;Acc:MGI:3045322]
71. Gm12034 ENSMUSG00000083878 29 0.935 - - - - - 0.935 predicted gene 12034 [Source:MGI Symbol;Acc:MGI:3651409]
72. Capn11 ENSMUSG00000058626 74 0.934 0.934 - - - - - calpain 11 [Source:MGI Symbol;Acc:MGI:1352490]
73. Syt12 ENSMUSG00000049303 17 0.933 - - - - - 0.933 synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
74. Gm22060 ENSMUSG00000064492 8 0.932 0.932 - - - - - predicted gene, 22060 [Source:MGI Symbol;Acc:MGI:5451837]
75. Gm26730 ENSMUSG00000097117 6 0.927 0.927 - - - - - predicted gene, 26730 [Source:MGI Symbol;Acc:MGI:5477224]
76. Kif6 ENSMUSG00000023999 28 0.926 - - - - - 0.926 kinesin family member 6 [Source:MGI Symbol;Acc:MGI:1098238]
77. Mir143hg Mir143hg 14 0.924 0.924 - - - - -
78. Wdr38 ENSMUSG00000035295 15 0.918 0.918 - - - - - WD repeat domain 38 [Source:MGI Symbol;Acc:MGI:1923896]
79. Grk1 ENSMUSG00000031450 15 0.915 - - - - - 0.915 G protein-coupled receptor kinase 1 [Source:MGI Symbol;Acc:MGI:1345146]
80. Gm20631 ENSMUSG00000093650 14 0.914 0.914 - - - - - predicted gene 20631 [Source:MGI Symbol;Acc:MGI:5313078]
81. Myo1a ENSMUSG00000025401 44 0.905 0.905 - - - - - myosin IA [Source:MGI Symbol;Acc:MGI:107732]
82. Smco3 ENSMUSG00000043298 18 0.9 - - - - - 0.900 single-pass membrane protein with coiled-coil domains 3 [Source:MGI Symbol;Acc:MGI:2443451]
83. Gm6419 ENSMUSG00000072407 22 0.899 - - - - - 0.899 predicted gene 6419 [Source:MGI Symbol;Acc:MGI:3647564]
84. Gm16755 ENSMUSG00000097658 12 0.898 - - - - - 0.898 predicted gene, 16755 [Source:MGI Symbol;Acc:MGI:4439679]
85. Gm9978 ENSMUSG00000055704 15 0.897 0.897 - - - - - predicted gene 9978 [Source:MGI Symbol;Acc:MGI:3641806]
86. Gm9763 Gm9763 22 0.895 - - - - - 0.895
87. Fbxo4 ENSMUSG00000022184 84 0.892 0.892 - - - - - F-box protein 4 [Source:MGI Symbol;Acc:MGI:2146220]
88. 1700012C14Rik ENSMUSG00000085470 43 0.887 - - - - - 0.887 RIKEN cDNA 1700012C14 gene [Source:MGI Symbol;Acc:MGI:1916587]
89. Wdr72 ENSMUSG00000044976 12 0.886 0.886 - - - - - WD repeat domain 72 [Source:MGI Symbol;Acc:MGI:3583957]
90. Gm4852 ENSMUSG00000081185 4 0.886 - - - - - 0.886 predicted pseudogene 4852 [Source:MGI Symbol;Acc:MGI:3643039]
91. Mical1 ENSMUSG00000019823 14 0.885 0.885 - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
92. Gm11100 ENSMUSG00000079357 25 0.883 0.883 - - - - - predicted gene 11100 [Source:MGI Symbol;Acc:MGI:3779338]
93. Mocs3 ENSMUSG00000074576 94 0.878 0.878 - - - - - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]
94. Sytl1 ENSMUSG00000028860 26 0.877 - - - - - 0.877 synaptotagmin-like 1 [Source:MGI Symbol;Acc:MGI:1933365]
95. RP23-302F9.4 RP23-302F9.4 7 0.877 0.877 - - - - -
96. Ahrr ENSMUSG00000021575 37 0.877 0.877 - - - - - aryl-hydrocarbon receptor repressor [Source:MGI Symbol;Acc:MGI:1333776]
97. AY074887 ENSMUSG00000044820 41 0.876 0.876 - - - - - cDNA sequence AY074887 [Source:MGI Symbol;Acc:MGI:3575512]
98. Plau ENSMUSG00000021822 21 0.876 - - - - - 0.876 plasminogen activator, urokinase [Source:MGI Symbol;Acc:MGI:97611]
99. Nr4a3 ENSMUSG00000028341 474 0.874 - - - - - 0.874 nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
100. Emr1 Emr1 41 0.868 0.868 - - - - -

There are 85 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA