Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rhbdf1

Gene Name Gene ID Reads Annotation
Rhbdf1 ENSMUSG00000020282 1113 rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]







Genes with expression patterns similar to Rhbdf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rhbdf1 ENSMUSG00000020282 1113 6 1.000 1.000 1.000 1.000 1.000 1.000 rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
2. Zfp369 ENSMUSG00000021514 1130 1.86 - 0.956 - - - 0.904 zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
3. Rad51ap1 ENSMUSG00000030346 1698 1.856 - 0.921 - - - 0.935 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
4. 1700052N19Rik 1700052N19Rik 913 1.852 - 0.924 - - - 0.928
5. Tmem80 ENSMUSG00000025505 1620 1.805 - 0.878 - - - 0.927 transmembrane protein 80 [Source:MGI Symbol;Acc:MGI:1918698]
6. BC026585 1005 1.714 - - - - 0.766 0.948 cDNA sequence BC026585, transcript variant X1
7. Mbd1 ENSMUSG00000024561 619 1.71 - - - - 0.754 0.956 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
8. Decr2 ENSMUSG00000036775 1047 1.706 - 0.963 - - 0.743 - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
9. Zfp866 ENSMUSG00000043090 1114 1.706 - 0.908 - - 0.798 - zinc finger protein 866 [Source:MGI Symbol;Acc:MGI:3584369]
10. Csrp2bp 1398 1.693 - 0.939 - - 0.754 - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
11. Cox10 ENSMUSG00000042148 1382 1.678 - - - - 0.745 0.933 heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 [Source:MGI Symbol;Acc:MGI:1917633]
12. Mcm10 ENSMUSG00000026669 1289 1.666 - 0.900 - - 0.766 - minichromosome maintenance 10 replication initiation factor [Source:MGI Symbol;Acc:MGI:1917274]
13. St3gal2 ENSMUSG00000031749 2401 1.652 - 0.893 - - - 0.759 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:99427]
14. Rrp1b ENSMUSG00000058392 1375 1.649 - 0.922 - - 0.727 - ribosomal RNA processing 1 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919712]
15. Spred1 ENSMUSG00000027351 2590 1.624 - - - - 0.848 0.776 sprouty protein with EVH-1 domain 1, related sequence [Source:MGI Symbol;Acc:MGI:2150016]
16. B3galtl B3galtl 1530 1.606 - - - - 0.724 0.882
17. Pigm ENSMUSG00000050229 2293 1.606 - 0.814 - - - 0.792 phosphatidylinositol glycan anchor biosynthesis, class M [Source:MGI Symbol;Acc:MGI:1914806]
18. Sptb ENSMUSG00000021061 824 1.603 - - - - 0.764 0.839 spectrin beta, erythrocytic [Source:MGI Symbol;Acc:MGI:98387]
19. Nmral1 ENSMUSG00000063445 5289 1.585 - 0.846 - - - 0.739 NmrA-like family domain containing 1 [Source:MGI Symbol;Acc:MGI:1915074]
20. Zfp451 ENSMUSG00000042197 3435 1.579 - 0.808 - - 0.771 - zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
21. Camsap2 ENSMUSG00000041570 2915 1.578 - 0.770 - - - 0.808 calmodulin regulated spectrin-associated protein family, member 2 [Source:MGI Symbol;Acc:MGI:1922434]
22. Zfp266 ENSMUSG00000060510 4296 1.56 - - - - 0.724 0.836 zinc finger protein 266 [Source:MGI Symbol;Acc:MGI:1924769]
23. Cenpt ENSMUSG00000036672 1001 1.56 - 0.850 - - 0.710 - centromere protein T [Source:MGI Symbol;Acc:MGI:2443939]
24. Smg8 ENSMUSG00000020495 2072 1.554 - - - - 0.704 0.850 smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:1921383]
25. Rnaseh2a ENSMUSG00000052926 1911 1.55 - - - - 0.775 0.775 ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
26. Topors ENSMUSG00000036822 2671 1.55 - 0.793 - - - 0.757 topoisomerase I binding, arginine/serine-rich [Source:MGI Symbol;Acc:MGI:2146189]
27. Sgol1 1886 1.548 - - - - 0.758 0.790 shugoshin-like 1 (S. pombe), transcript variant X2
28. Ddx52 ENSMUSG00000020677 2667 1.522 - - - - 0.703 0.819 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
29. Skida1 ENSMUSG00000054074 1796 1.522 - - - - 0.709 0.813 SKI/DACH domain containing 1 [Source:MGI Symbol;Acc:MGI:1919918]
30. Senp6 ENSMUSG00000034252 2919 1.498 - - - - 0.707 0.791 SUMO/sentrin specific peptidase 6 [Source:MGI Symbol;Acc:MGI:1922075]
31. Bckdha ENSMUSG00000060376 653 0.968 - 0.968 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
32. Pabpc4l ENSMUSG00000090919 1259 0.967 - 0.967 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
33. Zfp71-rs1 Zfp71-rs1 629 0.967 - 0.967 - - - -
34. Car8 ENSMUSG00000041261 286 0.967 - 0.967 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
35. Tnfrsf1a ENSMUSG00000030341 711 0.966 - 0.966 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
36. Suclg2 ENSMUSG00000061838 465 0.966 - 0.966 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
37. Gmds ENSMUSG00000038372 653 0.966 - 0.966 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
38. Gm25735 ENSMUSG00000092905 617 0.965 - 0.965 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
39. Klhl6 ENSMUSG00000043008 952 0.964 - 0.964 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
40. Rpl27-ps2 ENSMUSG00000082171 89 0.964 - 0.964 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
41. Smim4 ENSMUSG00000058351 454 0.963 - 0.963 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
42. Tmem246 ENSMUSG00000039611 866 0.962 - 0.962 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
43. Extl1 ENSMUSG00000028838 63 0.962 - 0.962 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
44. Ap2a1 ENSMUSG00000060279 108 0.962 - 0.962 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
45. Slc38a3 ENSMUSG00000010064 147 0.962 - 0.962 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
46. Kcnk5 ENSMUSG00000023243 191 0.962 - 0.962 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
47. Cyp27a1 ENSMUSG00000026170 153 0.962 - 0.962 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
48. Pdpr ENSMUSG00000033624 123 0.962 - 0.962 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
49. Usp35 ENSMUSG00000035713 112 0.961 - 0.961 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
50. Smpd3 ENSMUSG00000031906 194 0.961 - 0.961 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
51. Gm12942 332 0.961 - 0.961 - - - - predicted gene 12942
52. Ppp4r4 ENSMUSG00000021209 242 0.961 - 0.961 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
53. Ptges3l ENSMUSG00000097487 146 0.961 - 0.961 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
54. Frk ENSMUSG00000019779 639 0.961 - 0.961 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
55. Dhx34 ENSMUSG00000006019 240 0.961 - 0.961 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
56. Gm5776 ENSMUSG00000099647 589 0.96 - 0.960 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
57. Rab11fip5 ENSMUSG00000051343 496 0.96 - 0.960 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
58. Gm25734 Gm25734 104 0.96 - 0.960 - - - -
59. Harbi1 ENSMUSG00000027243 348 0.96 - 0.960 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
60. Zfp11 ENSMUSG00000051034 218 0.96 - 0.960 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
61. Cetn4 ENSMUSG00000045031 377 0.96 - 0.960 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
62. Zbtb12 ENSMUSG00000049823 373 0.959 - 0.959 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
63. Rbm12b1 ENSMUSG00000046667 331 0.959 - 0.959 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
64. Apoo ENSMUSG00000079508 815 0.959 - 0.959 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
65. Cd302 ENSMUSG00000060703 214 0.959 - 0.959 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
66. Blmh ENSMUSG00000020840 2762 0.959 - - - - - 0.959 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
67. Twf2 ENSMUSG00000023277 849 0.958 - 0.958 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
68. 2010111I01Rik ENSMUSG00000021458 591 0.958 - 0.958 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
69. Gm10307 ENSMUSG00000101093 159 0.957 - - - - - 0.957 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
70. Nradd ENSMUSG00000032491 668 0.957 - 0.957 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
71. Pla2g15 ENSMUSG00000031903 321 0.957 - 0.957 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
72. Mcc ENSMUSG00000071856 4024 0.957 - 0.957 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
73. Wdr74 ENSMUSG00000042729 669 0.957 - 0.957 - - - - WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
74. Alkbh4 ENSMUSG00000039754 367 0.956 - - - - - 0.956 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
75. Plekhm1 ENSMUSG00000034247 251 0.956 - 0.956 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
76. AK129341 AK129341 204 0.956 - 0.956 - - - -
77. Inadl 509 0.956 - 0.956 - - - - InaD-like (Drosophila), transcript variant X9
78. Tmem176a ENSMUSG00000023367 831 0.956 - 0.956 - - - - transmembrane protein 176A [Source:MGI Symbol;Acc:MGI:1913308]
79. Fam131a ENSMUSG00000050821 113 0.955 - - - - - 0.955 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
80. Aldh6a1 ENSMUSG00000021238 522 0.955 - 0.955 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
81. Paxbp1 ENSMUSG00000022974 322 0.955 - - - - - 0.955 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
82. Tmem26 ENSMUSG00000060044 379 0.955 - 0.955 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
83. Pfkfb2 ENSMUSG00000026409 480 0.955 - - - - - 0.955 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
84. Gm13910 ENSMUSG00000063684 126 0.955 - - - - - 0.955 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
85. Lhpp ENSMUSG00000030946 365 0.955 - - - - - 0.955 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
86. Wdr46 ENSMUSG00000024312 449 0.954 - 0.954 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
87. Gm24451 ENSMUSG00000065287 57 0.954 - - - - - 0.954 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
88. Il17d ENSMUSG00000050222 119 0.954 - - - - - 0.954 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
89. Atg3 ENSMUSG00000022663 1323 0.954 - 0.954 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
90. Mcm8 ENSMUSG00000027353 1598 0.954 - - - - - 0.954 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
91. Phf19 ENSMUSG00000026873 83 0.954 - - - - - 0.954 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
92. 0610009B22Rik ENSMUSG00000007777 752 0.954 - 0.954 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
93. 2610035D17Rik ENSMUSG00000087259 651 0.953 - 0.953 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
94. Syne4 ENSMUSG00000019737 724 0.953 - 0.953 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
95. Sh3rf2 ENSMUSG00000057719 60 0.953 - - - - - 0.953 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
96. Ing2 ENSMUSG00000063049 913 0.953 - 0.953 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
97. Tmem186 ENSMUSG00000043140 711 0.953 - 0.953 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
98. Usp36 ENSMUSG00000033909 2464 0.953 - 0.953 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
99. Gm14286 ENSMUSG00000087445 166 0.953 - - - - - 0.953 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
100. Ubtd1 ENSMUSG00000025171 336 0.953 - 0.953 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]

There are 886 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA