Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rfx1

Gene Name Gene ID Reads Annotation
Rfx1 ENSMUSG00000031706 2325 regulatory factor X, 1 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:105982]







Genes with expression patterns similar to Rfx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rfx1 ENSMUSG00000031706 2325 6 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 1 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:105982]
2. Rad51ap1 ENSMUSG00000030346 1698 1.82 0.989 - - - - 0.831 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
3. Usp16 ENSMUSG00000025616 1330 1.789 0.959 - - - - 0.830 ubiquitin specific peptidase 16 [Source:MGI Symbol;Acc:MGI:1921362]
4. Krcc1 ENSMUSG00000053012 1828 1.76 0.950 - - - - 0.810 lysine-rich coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1889377]
5. Ndufv3 ENSMUSG00000024038 4549 1.753 0.990 - - - - 0.763 NADH:ubiquinone oxidoreductase core subunit V3 [Source:MGI Symbol;Acc:MGI:1890894]
6. Gde1 ENSMUSG00000033917 2540 1.731 0.990 - - - - 0.741 glycerophosphodiester phosphodiesterase 1 [Source:MGI Symbol;Acc:MGI:1891827]
7. Samm50 ENSMUSG00000022437 3134 1.698 0.985 0.713 - - - - SAMM50 sorting and assembly machinery component [Source:MGI Symbol;Acc:MGI:1915903]
8. Dclre1a ENSMUSG00000025077 675 0.993 0.993 - - - - - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
9. Dnal4 ENSMUSG00000022420 1780 0.993 0.993 - - - - - dynein, axonemal, light chain 4 [Source:MGI Symbol;Acc:MGI:1859217]
10. Zbtb25 ENSMUSG00000056459 934 0.992 0.992 - - - - - zinc finger and BTB domain containing 25 [Source:MGI Symbol;Acc:MGI:99197]
11. Hmgb1-ps6 ENSMUSG00000080928 263 0.992 0.992 - - - - - high mobility group box 1, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3776507]
12. B930082K07Rik ENSMUSG00000097734 272 0.992 0.992 - - - - - RIKEN cDNA B930082K07 gene [Source:MGI Symbol;Acc:MGI:2445108]
13. Mnx1 ENSMUSG00000001566 309 0.992 0.992 - - - - - motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]
14. Snrnp35 ENSMUSG00000029402 749 0.992 0.992 - - - - - small nuclear ribonucleoprotein 35 (U11/U12) [Source:MGI Symbol;Acc:MGI:1923417]
15. Gm8898 Gm8898 261 0.992 0.992 - - - - -
16. Gm16185 ENSMUSG00000084911 290 0.992 0.992 - - - - - predicted gene 16185 [Source:MGI Symbol;Acc:MGI:3802169]
17. Narf ENSMUSG00000000056 843 0.992 0.992 - - - - - nuclear prelamin A recognition factor [Source:MGI Symbol;Acc:MGI:1914858]
18. Ppp1r14a ENSMUSG00000037166 745 0.992 0.992 - - - - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
19. Mrpl47 ENSMUSG00000037531 2367 0.992 0.992 - - - - - mitochondrial ribosomal protein L47 [Source:MGI Symbol;Acc:MGI:1921850]
20. Ctsz ENSMUSG00000016256 997 0.991 0.991 - - - - - cathepsin Z [Source:MGI Symbol;Acc:MGI:1891190]
21. Nmrk1 ENSMUSG00000037847 809 0.991 0.991 - - - - - nicotinamide riboside kinase 1 [Source:MGI Symbol;Acc:MGI:2147434]
22. Spin2c ENSMUSG00000046550 850 0.991 0.991 - - - - - spindlin family, member 2C [Source:MGI Symbol;Acc:MGI:3605548]
23. Nfatc2ip ENSMUSG00000030722 920 0.991 0.991 - - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
24. Eral1 ENSMUSG00000020832 1059 0.991 0.991 - - - - - Era (G-protein)-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1889295]
25. 9430023L20Rik 9430023L20Rik 1183 0.991 0.991 - - - - -
26. Apeh ENSMUSG00000032590 785 0.991 0.991 - - - - - acylpeptide hydrolase [Source:MGI Symbol;Acc:MGI:88041]
27. Daam1 ENSMUSG00000034574 933 0.991 0.991 - - - - - dishevelled associated activator of morphogenesis 1 [Source:MGI Symbol;Acc:MGI:1914596]
28. Aldh4a1 ENSMUSG00000028737 1176 0.991 0.991 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:MGI Symbol;Acc:MGI:2443883]
29. Fzd7 ENSMUSG00000041075 1764 0.991 0.991 - - - - - frizzled class receptor 7 [Source:MGI Symbol;Acc:MGI:108570]
30. Dynlt3 ENSMUSG00000031176 901 0.99 0.990 - - - - - dynein light chain Tctex-type 3 [Source:MGI Symbol;Acc:MGI:1914367]
31. Ercc4 ENSMUSG00000022545 1268 0.99 0.990 - - - - - excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:MGI Symbol;Acc:MGI:1354163]
32. Cecr2 ENSMUSG00000071226 2090 0.99 0.990 - - - - - CECR2, histone acetyl-lysine reader [Source:MGI Symbol;Acc:MGI:1923799]
33. Cog4 ENSMUSG00000031753 1640 0.99 0.990 - - - - - component of oligomeric golgi complex 4 [Source:MGI Symbol;Acc:MGI:2142808]
34. Tgfbi ENSMUSG00000035493 4482 0.989 0.989 - - - - - transforming growth factor, beta induced [Source:MGI Symbol;Acc:MGI:99959]
35. Rps19 ENSMUSG00000040952 1662 0.989 0.989 - - - - - ribosomal protein S19 [Source:MGI Symbol;Acc:MGI:1333780]
36. Arl6ip4 ENSMUSG00000029404 2690 0.988 0.988 - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:MGI Symbol;Acc:MGI:1929500]
37. Dnajc15 ENSMUSG00000022013 1651 0.988 0.988 - - - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:MGI Symbol;Acc:MGI:1913398]
38. Ccdc59 ENSMUSG00000019897 2124 0.987 0.987 - - - - - coiled-coil domain containing 59 [Source:MGI Symbol;Acc:MGI:1289302]
39. Afg3l2 ENSMUSG00000024527 3339 0.987 0.987 - - - - - AFG3-like AAA ATPase 2 [Source:MGI Symbol;Acc:MGI:1916847]
40. Tpp1 ENSMUSG00000030894 2200 0.987 0.987 - - - - - tripeptidyl peptidase I [Source:MGI Symbol;Acc:MGI:1336194]
41. Upf3b ENSMUSG00000036572 3876 0.987 0.987 - - - - - UPF3 regulator of nonsense transcripts homolog B (yeast) [Source:MGI Symbol;Acc:MGI:1915384]
42. Fam193a ENSMUSG00000037210 8356 0.986 0.986 - - - - - family with sequence similarity 193, member A [Source:MGI Symbol;Acc:MGI:2447768]
43. Gcn1l1 ENSMUSG00000041638 2104 0.986 0.986 - - - - - GCN1 general control of amino-acid synthesis 1-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:2444248]
44. Klhl21 ENSMUSG00000073700 522 0.985 0.985 - - - - - kelch-like 21 [Source:MGI Symbol;Acc:MGI:1919288]
45. Znrd1 ENSMUSG00000036315 3497 0.985 0.985 - - - - - zinc ribbon domain containing, 1 [Source:MGI Symbol;Acc:MGI:1913386]
46. Bdp1 ENSMUSG00000049658 1860 0.984 0.984 - - - - - B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [Source:MGI Symbol;Acc:MGI:1347077]
47. Lyar ENSMUSG00000067367 3269 0.982 0.982 - - - - - Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]
48. Sec24c ENSMUSG00000039367 2939 0.982 0.982 - - - - - Sec24 related gene family, member C (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919746]
49. Nmt1 ENSMUSG00000020936 4325 0.982 0.982 - - - - - N-myristoyltransferase 1 [Source:MGI Symbol;Acc:MGI:102579]
50. Dkc1 ENSMUSG00000031403 2310 0.982 0.982 - - - - - dyskeratosis congenita 1, dyskerin [Source:MGI Symbol;Acc:MGI:1861727]
51. Sbk1 ENSMUSG00000042978 3908 0.98 0.980 - - - - - SH3-binding kinase 1 [Source:MGI Symbol;Acc:MGI:2135937]
52. Chd8 ENSMUSG00000053754 3885 0.979 0.979 - - - - - chromodomain helicase DNA binding protein 8 [Source:MGI Symbol;Acc:MGI:1915022]
53. Sqle ENSMUSG00000022351 3055 0.978 0.978 - - - - - squalene epoxidase [Source:MGI Symbol;Acc:MGI:109296]
54. Ints4 ENSMUSG00000025133 3040 0.977 0.977 - - - - - integrator complex subunit 4 [Source:MGI Symbol;Acc:MGI:1917164]
55. Fbl ENSMUSG00000046865 3764 0.976 0.976 - - - - - fibrillarin [Source:MGI Symbol;Acc:MGI:95486]
56. Aste1 ENSMUSG00000032567 469 0.975 0.975 - - - - - asteroid homolog 1 [Source:MGI Symbol;Acc:MGI:1913845]
57. Imp4 ENSMUSG00000026127 3230 0.975 0.975 - - - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:MGI Symbol;Acc:MGI:106572]
58. Rybp ENSMUSG00000072872 2418 0.975 0.975 - - - - - RING1 and YY1 binding protein [Source:MGI Symbol;Acc:MGI:1929059]
59. Atxn7l3 ENSMUSG00000059995 4118 0.974 0.974 - - - - - ataxin 7-like 3 [Source:MGI Symbol;Acc:MGI:3036270]
60. Pard6g ENSMUSG00000056214 2715 0.974 0.974 - - - - - par-6 family cell polarity regulator gamma [Source:MGI Symbol;Acc:MGI:2135606]
61. Gfm1 ENSMUSG00000027774 1782 0.973 0.973 - - - - - G elongation factor, mitochondrial 1 [Source:MGI Symbol;Acc:MGI:107339]
62. Tagln ENSMUSG00000032085 1289 0.973 0.973 - - - - - transgelin [Source:MGI Symbol;Acc:MGI:106012]
63. Usp48 ENSMUSG00000043411 3442 0.97 0.970 - - - - - ubiquitin specific peptidase 48 [Source:MGI Symbol;Acc:MGI:2158502]
64. Mib1 ENSMUSG00000024294 3226 0.97 0.970 - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2443157]
65. Hs6st2 ENSMUSG00000062184 2393 0.967 0.967 - - - - - heparan sulfate 6-O-sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:1354959]
66. Akap12 ENSMUSG00000038587 5615 0.967 0.967 - - - - - A kinase (PRKA) anchor protein (gravin) 12 [Source:MGI Symbol;Acc:MGI:1932576]
67. Mrpl51 ENSMUSG00000030335 4298 0.966 0.966 - - - - - mitochondrial ribosomal protein L51 [Source:MGI Symbol;Acc:MGI:1913743]
68. Vdac1 ENSMUSG00000020402 5008 0.965 0.965 - - - - - voltage-dependent anion channel 1 [Source:MGI Symbol;Acc:MGI:106919]
69. Plk1 ENSMUSG00000030867 5444 0.963 0.963 - - - - - polo like kinase 1 [Source:MGI Symbol;Acc:MGI:97621]
70. Pvrl3 Pvrl3 3285 0.963 0.963 - - - - -
71. Fads1 ENSMUSG00000010663 7507 0.962 0.962 - - - - - fatty acid desaturase 1 [Source:MGI Symbol;Acc:MGI:1923517]
72. Aurkb ENSMUSG00000020897 2512 0.961 0.961 - - - - - aurora kinase B [Source:MGI Symbol;Acc:MGI:107168]
73. Prdm4 ENSMUSG00000035529 1371 0.959 0.959 - - - - - PR domain containing 4 [Source:MGI Symbol;Acc:MGI:1920093]
74. Ybx3 ENSMUSG00000030189 16551 0.956 0.956 - - - - - Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]
75. Fus ENSMUSG00000030795 9365 0.953 0.953 - - - - - fused in sarcoma [Source:MGI Symbol;Acc:MGI:1353633]
76. Srp68 ENSMUSG00000020780 3887 0.953 0.953 - - - - - signal recognition particle 68 [Source:MGI Symbol;Acc:MGI:1917447]
77. Kif23 ENSMUSG00000032254 3411 0.952 0.952 - - - - - kinesin family member 23 [Source:MGI Symbol;Acc:MGI:1919069]
78. Smarcc1 ENSMUSG00000032481 8961 0.952 0.952 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]
79. Ero1l ENSMUSG00000021831 1846 0.951 0.951 - - - - - ERO1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1354385]
80. Armcx2 ENSMUSG00000033436 11069 0.949 0.949 - - - - - armadillo repeat containing, X-linked 2 [Source:MGI Symbol;Acc:MGI:1914666]
81. Wdr89 ENSMUSG00000045690 12291 0.948 0.948 - - - - - WD repeat domain 89 [Source:MGI Symbol;Acc:MGI:1919588]
82. Pgrmc2 ENSMUSG00000049940 3815 0.944 0.944 - - - - - progesterone receptor membrane component 2 [Source:MGI Symbol;Acc:MGI:1918054]
83. Birc6 ENSMUSG00000024073 6489 0.942 0.942 - - - - - baculoviral IAP repeat-containing 6 [Source:MGI Symbol;Acc:MGI:1276108]
84. Golga7 ENSMUSG00000015341 4741 0.939 0.939 - - - - - golgi autoantigen, golgin subfamily a, 7 [Source:MGI Symbol;Acc:MGI:1931029]
85. Nipbl ENSMUSG00000022141 6148 0.939 0.939 - - - - - NIPBL cohesin loading factor [Source:MGI Symbol;Acc:MGI:1913976]
86. Rps24-ps3 ENSMUSG00000081049 8082 0.937 0.937 - - - - - ribosomal protein S24, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3644407]
87. Emg1 ENSMUSG00000004268 6379 0.936 0.936 - - - - - EMG1 N1-specific pseudouridine methyltransferase [Source:MGI Symbol;Acc:MGI:1315195]
88. Trove2 ENSMUSG00000018199 10316 0.935 0.935 - - - - - TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
89. Ptgr1 ENSMUSG00000028378 1108 0.934 0.934 - - - - - prostaglandin reductase 1 [Source:MGI Symbol;Acc:MGI:1914353]
90. Hn1 10758 0.93 0.930 - - - - - hematological and neurological expressed sequence 1
91. Hdgf ENSMUSG00000004897 19641 0.928 0.928 - - - - - hepatoma-derived growth factor [Source:MGI Symbol;Acc:MGI:1194494]
92. Bex1 ENSMUSG00000050071 5592 0.926 0.926 - - - - - brain expressed X-linked 1 [Source:MGI Symbol;Acc:MGI:1328321]
93. Ankrd17 ENSMUSG00000055204 7882 0.917 0.917 - - - - - ankyrin repeat domain 17 [Source:MGI Symbol;Acc:MGI:1932101]
94. Rsf1 ENSMUSG00000035623 2499 0.916 0.916 - - - - - remodeling and spacing factor 1 [Source:MGI Symbol;Acc:MGI:2682305]
95. Khdrbs1 ENSMUSG00000028790 9502 0.913 0.913 - - - - - KH domain containing, RNA binding, signal transduction associated 1 [Source:MGI Symbol;Acc:MGI:893579]
96. Meis1 ENSMUSG00000020160 10197 0.911 0.911 - - - - - Meis homeobox 1 [Source:MGI Symbol;Acc:MGI:104717]
97. Prdx6 ENSMUSG00000026701 10861 0.909 0.909 - - - - - peroxiredoxin 6 [Source:MGI Symbol;Acc:MGI:894320]
98. Hnrnpd ENSMUSG00000000568 11419 0.906 0.906 - - - - - heterogeneous nuclear ribonucleoprotein D [Source:MGI Symbol;Acc:MGI:101947]
99. Hnrnpa1 ENSMUSG00000046434 25429 0.903 0.903 - - - - - heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
100. Uqcrfs1 ENSMUSG00000038462 8620 0.896 0.896 - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:MGI Symbol;Acc:MGI:1913944]

There are 428 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA