Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rbfox3

Gene Name Gene ID Reads Annotation
Rbfox3 ENSMUSG00000025576 384 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]







Genes with expression patterns similar to Rbfox3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rbfox3 ENSMUSG00000025576 384 6 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
2. Rtn1 ENSMUSG00000021087 2547 3.939 - 0.772 0.725 0.754 0.799 0.889 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
3. Stmn2 ENSMUSG00000027500 6200 3.928 - 0.822 0.754 0.753 0.757 0.842 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
4. Myt1 ENSMUSG00000010505 661 3.818 - 0.747 0.845 0.744 0.701 0.781 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
5. Stmn3 ENSMUSG00000027581 1327 3.712 - 0.720 0.741 0.746 0.709 0.796 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
6. Rufy3 ENSMUSG00000029291 695 3.243 - 0.780 0.888 - 0.737 0.838 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
7. Nefm ENSMUSG00000022054 2534 3.166 - 0.801 0.760 - 0.762 0.843 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
8. Ina ENSMUSG00000034336 3835 3.166 - 0.853 0.847 - 0.755 0.711 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
9. Nefl ENSMUSG00000022055 4031 3.121 - 0.840 0.763 - 0.718 0.800 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
10. Actl6b ENSMUSG00000029712 203 3.101 - 0.789 0.754 0.749 - 0.809 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
11. Syn1 ENSMUSG00000037217 289 3.082 - - 0.868 0.701 0.715 0.798 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
12. Tagln3 ENSMUSG00000022658 6054 3.045 - 0.709 0.781 0.746 - 0.809 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
13. Tubb3 ENSMUSG00000062380 9211 3.018 - 0.785 - 0.724 0.703 0.806 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
14. Dcx ENSMUSG00000031285 1733 2.996 - 0.799 - 0.735 0.723 0.739 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
15. Akap6 ENSMUSG00000061603 420 2.877 - 0.701 - 0.700 0.743 0.733 A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
16. Kif5a ENSMUSG00000074657 425 2.379 - 0.812 0.859 - - 0.708 kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
17. Cdk5r1 ENSMUSG00000048895 2376 2.361 - - 0.828 - 0.711 0.822 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
18. Dusp8 ENSMUSG00000037887 348 2.334 - - 0.844 - 0.775 0.715 dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
19. Mapk8ip2 ENSMUSG00000022619 910 2.328 - - 0.748 - 0.726 0.854 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
20. Gap43 ENSMUSG00000047261 5946 2.32 - 0.789 - - 0.755 0.776 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
21. Mllt11 ENSMUSG00000053192 1776 2.3 - - 0.789 - 0.727 0.784 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
22. Lhx3 ENSMUSG00000026934 117 2.293 - 0.778 0.811 - - 0.704 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
23. Elavl3 ENSMUSG00000003410 2830 2.291 - 0.706 0.854 - - 0.731 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
24. Mapt ENSMUSG00000018411 1834 2.287 - - 0.794 - 0.731 0.762 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
25. Fez1 ENSMUSG00000032118 2537 2.269 - - 0.734 0.728 - 0.807 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
26. Ap3b2 ENSMUSG00000062444 565 2.266 - - 0.803 - 0.722 0.741 adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
27. Elavl2 ENSMUSG00000008489 2109 2.26 - 0.757 - 0.749 - 0.754 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
28. Crmp1 ENSMUSG00000029121 3165 2.252 - 0.722 - - 0.722 0.808 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
29. L1cam ENSMUSG00000031391 813 2.233 - 0.703 0.780 - - 0.750 L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
30. Tubb2b ENSMUSG00000045136 41060 2.232 - - 0.746 0.729 - 0.757 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
31. Dpysl5 ENSMUSG00000029168 2096 2.216 - - 0.752 0.739 0.725 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
32. Olig2 ENSMUSG00000039830 329 1.672 - 0.852 0.820 - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
33. Rasgef1c ENSMUSG00000020374 48 1.648 - 0.798 0.850 - - - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
34. A930011O12Rik A930011O12Rik 359 1.648 - - 0.904 - - 0.744
35. Uchl1 ENSMUSG00000029223 2803 1.64 - - 0.805 - - 0.835 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
36. Slc10a4 ENSMUSG00000029219 550 1.638 - 0.861 0.777 - - - solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
37. Cadps ENSMUSG00000054423 870 1.635 - 0.788 - - - 0.847 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
38. Nmnat2 ENSMUSG00000042751 205 1.61 - - 0.781 - - 0.829 nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
39. Elavl4 ENSMUSG00000028546 6084 1.604 - 0.751 - - - 0.853 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
40. Rhbdl3 ENSMUSG00000017692 783 1.59 - - 0.887 - - 0.703 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
41. Olig1 ENSMUSG00000046160 18 1.588 - 0.813 0.775 - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
42. Sptbn2 ENSMUSG00000067889 4571 1.58 - - 0.769 - - 0.811 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
43. Myt1l ENSMUSG00000061911 81 1.572 - - 0.773 - - 0.799 myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
44. Srgap3 ENSMUSG00000030257 2941 1.57 - - 0.811 - - 0.759 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
45. Ube2ql1 ENSMUSG00000052981 312 1.568 - - 0.829 - - 0.739 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
46. Mgat5b ENSMUSG00000043857 152 1.562 - - 0.846 - - 0.716 mannoside acetylglucosaminyltransferase 5, isoenzyme B [Source:MGI Symbol;Acc:MGI:3606200]
47. Ecel1 ENSMUSG00000026247 83 1.557 - 0.713 0.844 - - - endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
48. Sncg ENSMUSG00000023064 1702 1.552 - 0.804 - - - 0.748 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
49. Tuba1a ENSMUSG00000072235 51129 1.54 - - 0.807 0.733 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
50. Fgfbp3 ENSMUSG00000047632 2036 1.539 - - - 0.743 - 0.796 fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
51. Map2 ENSMUSG00000015222 2576 1.52 - - 0.743 0.777 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
52. Nhlh1 ENSMUSG00000051251 2017 1.515 - - 0.808 - - 0.707 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
53. Map1b ENSMUSG00000052727 28977 1.511 - - 0.777 0.734 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
54. Apc2 ENSMUSG00000020135 328 1.497 - 0.762 - - - 0.735 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
55. Crtac1 ENSMUSG00000042401 228 1.496 - 0.770 0.726 - - - cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
56. Hecw1 ENSMUSG00000021301 236 1.49 - - 0.731 - - 0.759 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2444115]
57. Tmem198 ENSMUSG00000051703 118 1.486 - - - - 0.771 0.715 transmembrane protein 198 [Source:MGI Symbol;Acc:MGI:2443133]
58. Dpysl3 ENSMUSG00000024501 7004 1.483 - - - - 0.705 0.778 dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
59. Fam57b ENSMUSG00000058966 243 1.483 - - 0.724 - - 0.759 family with sequence similarity 57, member B [Source:MGI Symbol;Acc:MGI:1916202]
60. Rbfox1 ENSMUSG00000008658 758 1.481 - 0.755 - - - 0.726 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
61. Ank3 ENSMUSG00000069601 3116 1.481 - - - - 0.768 0.713 ankyrin 3, epithelial [Source:MGI Symbol;Acc:MGI:88026]
62. Sox2ot ENSMUSG00000105265 475 1.477 - - 0.770 0.707 - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
63. Neurod4 ENSMUSG00000048015 764 1.474 - 0.731 - - - 0.743 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
64. Kif5c ENSMUSG00000026764 1283 1.466 - - - - 0.714 0.752 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
65. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 1.442 - 0.701 - 0.741 - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
66. 9330159F19Rik ENSMUSG00000004360 464 1.437 - - - - 0.703 0.734 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
67. Rab3c ENSMUSG00000021700 370 1.412 - 0.705 - - - 0.707 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
68. Ncan ENSMUSG00000002341 521 0.894 - - 0.894 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
69. Gng3 ENSMUSG00000071658 2104 0.881 - - - - - 0.881 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
70. Cpne6 ENSMUSG00000022212 33 0.877 - - 0.877 - - - copine VI [Source:MGI Symbol;Acc:MGI:1334445]
71. Gm3764 ENSMUSG00000097156 474 0.875 - - 0.875 - - - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
72. Scg3 ENSMUSG00000032181 445 0.864 - - 0.864 - - - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
73. Rps6kl1 ENSMUSG00000019235 20 0.864 - - 0.864 - - - ribosomal protein S6 kinase-like 1 [Source:MGI Symbol;Acc:MGI:2443413]
74. Syt2 ENSMUSG00000026452 261 0.862 - - 0.862 - - - synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
75. Spock2 ENSMUSG00000058297 1096 0.859 - - - - - 0.859 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
76. Uts2b ENSMUSG00000056423 294 0.855 - - 0.855 - - - urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
77. Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 0.853 - - 0.853 - - - RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]
78. Igsf21 ENSMUSG00000040972 143 0.846 - - 0.846 - - - immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]
79. Rundc3a ENSMUSG00000006575 421 0.845 - - - - - 0.845 RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
80. Isl2 ENSMUSG00000032318 488 0.837 - 0.837 - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
81. Cend1 ENSMUSG00000060240 100 0.832 - - 0.832 - - - cell cycle exit and neuronal differentiation 1 [Source:MGI Symbol;Acc:MGI:1929898]
82. Kcnq2 ENSMUSG00000016346 94 0.832 - - 0.832 - - - potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
83. Gprin1 ENSMUSG00000069227 1013 0.831 - - 0.831 - - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
84. Sp8 ENSMUSG00000048562 219 0.827 - - - - - 0.827 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
85. B020004J07Rik ENSMUSG00000035201 23 0.826 - 0.826 - - - - RIKEN cDNA B020004J07 gene [Source:MGI Symbol;Acc:MGI:3588238]
86. St18 ENSMUSG00000033740 408 0.826 - - 0.826 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
87. Scg2 ENSMUSG00000050711 91 0.821 - 0.821 - - - - secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
88. Cryba1 ENSMUSG00000000724 20 0.819 - - 0.819 - - - crystallin, beta A1 [Source:MGI Symbol;Acc:MGI:88518]
89. Gm20501 ENSMUSG00000092536 57 0.818 - - 0.818 - - - predicted gene 20501 [Source:MGI Symbol;Acc:MGI:5141966]
90. Disp2 ENSMUSG00000040035 230 0.815 - - 0.815 - - - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
91. Rgs20 ENSMUSG00000002459 23 0.812 - - 0.812 - - - regulator of G-protein signaling 20 [Source:MGI Symbol;Acc:MGI:1929866]
92. Lhfpl5 ENSMUSG00000062252 9 0.81 - - 0.810 - - - lipoma HMGIC fusion partner-like 5 [Source:MGI Symbol;Acc:MGI:1915382]
93. Gm2990 ENSMUSG00000097794 46 0.809 - - 0.809 - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
94. Gm16010 ENSMUSG00000085541 23 0.807 - - 0.807 - - - predicted gene 16010 [Source:MGI Symbol;Acc:MGI:3802126]
95. Arhgap36 ENSMUSG00000036198 404 0.805 - 0.805 - - - - Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
96. Tubb4a ENSMUSG00000062591 500 0.805 - - - - - 0.805 tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]
97. Chgb ENSMUSG00000027350 341 0.804 - 0.804 - - - - chromogranin B [Source:MGI Symbol;Acc:MGI:88395]
98. Nrcam ENSMUSG00000020598 266 0.803 - - - - - 0.803 neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
99. Unc13a ENSMUSG00000034799 35 0.799 - - 0.799 - - - unc-13 homolog A [Source:MGI Symbol;Acc:MGI:3051532]
100. Chga ENSMUSG00000021194 199 0.799 - - 0.799 - - - chromogranin A [Source:MGI Symbol;Acc:MGI:88394]

There are 82 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA