Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rbbp4

Gene Name Gene ID Reads Annotation
Rbbp4 ENSMUSG00000057236 725 retinoblastoma binding protein 4, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194912]







Genes with expression patterns similar to Rbbp4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rbbp4 ENSMUSG00000057236 725 6 1.000 1.000 1.000 1.000 1.000 1.000 retinoblastoma binding protein 4, chromatin remodeling factor [Source:MGI Symbol;Acc:MGI:1194912]
2. Ggnbp1 ENSMUSG00000048731 146 0.883 - - - - - 0.883 gametogenetin binding protein 1 [Source:MGI Symbol;Acc:MGI:3055306]
3. Fam217a ENSMUSG00000021414 138 0.883 - - - - - 0.883 family with sequence similarity 217, member A [Source:MGI Symbol;Acc:MGI:1919114]
4. Cpsf4l ENSMUSG00000018727 26 0.866 - - - - - 0.866 cleavage and polyadenylation specific factor 4-like [Source:MGI Symbol;Acc:MGI:1277182]
5. Gm6023 ENSMUSG00000081159 42 0.865 - - - - - 0.865 predicted gene 6023 [Source:MGI Symbol;Acc:MGI:3645815]
6. Gm15843 ENSMUSG00000085812 90 0.865 - - - - - 0.865 predicted gene 15843 [Source:MGI Symbol;Acc:MGI:3801845]
7. Gm16702 ENSMUSG00000097796 133 0.865 - - - - - 0.865 predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
8. Acss3 ENSMUSG00000035948 40 0.864 - - - - - 0.864 acyl-CoA synthetase short-chain family member 3 [Source:MGI Symbol;Acc:MGI:2685720]
9. B3gnt7 ENSMUSG00000079445 259 0.862 - - - - - 0.862 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:MGI Symbol;Acc:MGI:2384394]
10. Gm12760 ENSMUSG00000083434 41 0.86 - - - - - 0.860 predicted gene 12760 [Source:MGI Symbol;Acc:MGI:3649974]
11. Gm22716 ENSMUSG00000095178 30 0.86 - - - - - 0.860 predicted gene, 22716 [Source:MGI Symbol;Acc:MGI:5452493]
12. Gm14299 ENSMUSG00000082850 35 0.859 - - - - - 0.859 predicted gene 14299 [Source:MGI Symbol;Acc:MGI:3650442]
13. Cxcl16 ENSMUSG00000018920 38 0.859 - - - - - 0.859 chemokine (C-X-C motif) ligand 16 [Source:MGI Symbol;Acc:MGI:1932682]
14. Polg2 ENSMUSG00000020718 273 0.859 - - - - - 0.859 polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
15. Mttp ENSMUSG00000028158 53 0.859 - - - - - 0.859 microsomal triglyceride transfer protein [Source:MGI Symbol;Acc:MGI:106926]
16. Nlrp5 ENSMUSG00000015721 71 0.859 - - - - - 0.859 NLR family, pyrin domain containing 5 [Source:MGI Symbol;Acc:MGI:1345193]
17. Mia ENSMUSG00000089661 26 0.859 - - - - - 0.859 melanoma inhibitory activity [Source:MGI Symbol;Acc:MGI:109615]
18. Acsm2 ENSMUSG00000030945 31 0.858 - - - - - 0.858 acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
19. Gm17029 ENSMUSG00000086740 26 0.858 - - - - - 0.858 predicted gene 17029 [Source:MGI Symbol;Acc:MGI:4937856]
20. Pkd1l2 ENSMUSG00000034416 26 0.858 - - - - - 0.858 polycystic kidney disease 1 like 2 [Source:MGI Symbol;Acc:MGI:2664668]
21. Gm11809 ENSMUSG00000082122 13 0.858 - - - - - 0.858 predicted gene 11809 [Source:MGI Symbol;Acc:MGI:3650709]
22. Gm12680 Gm12680 20 0.858 - - - - - 0.858
23. Gm16200 ENSMUSG00000081520 19 0.858 - - - - - 0.858 predicted gene 16200 [Source:MGI Symbol;Acc:MGI:3801928]
24. Cd27 ENSMUSG00000030336 23 0.857 - - - - - 0.857 CD27 antigen [Source:MGI Symbol;Acc:MGI:88326]
25. Prss43 ENSMUSG00000058398 18 0.857 - - - - - 0.857 protease, serine 43 [Source:MGI Symbol;Acc:MGI:2684822]
26. Gm10644 ENSMUSG00000074219 28 0.857 - - - - - 0.857 predicted gene 10644 [Source:MGI Symbol;Acc:MGI:3704314]
27. Cftr ENSMUSG00000041301 43 0.855 - - - - - 0.855 cystic fibrosis transmembrane conductance regulator [Source:MGI Symbol;Acc:MGI:88388]
28. D430040D24Rik ENSMUSG00000087589 27 0.854 - - - - - 0.854 RIKEN cDNA D430040D24 gene [Source:MGI Symbol;Acc:MGI:2442526]
29. Mcmdc2 ENSMUSG00000046101 117 0.854 - - - - - 0.854 minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
30. Acyp2 ENSMUSG00000060923 79 0.853 - - - - - 0.853 acylphosphatase 2, muscle type [Source:MGI Symbol;Acc:MGI:1922822]
31. Cpa6 ENSMUSG00000042501 115 0.852 - - - - - 0.852 carboxypeptidase A6 [Source:MGI Symbol;Acc:MGI:3045348]
32. Prom2 ENSMUSG00000027376 25 0.852 - - - - - 0.852 prominin 2 [Source:MGI Symbol;Acc:MGI:2138997]
33. Gm10433 ENSMUSG00000072884 31 0.852 - - - - - 0.852 predicted gene 10433 [Source:MGI Symbol;Acc:MGI:3642010]
34. Gm2986 ENSMUSG00000083700 369 0.84 - - - - - 0.840 predicted gene 2986 [Source:MGI Symbol;Acc:MGI:3781164]
35. Opcml ENSMUSG00000062257 231 0.84 - - - - - 0.840 opioid binding protein/cell adhesion molecule-like [Source:MGI Symbol;Acc:MGI:97397]
36. Gm24187 ENSMUSG00000088609 210 0.839 - - - - - 0.839 predicted gene, 24187 [Source:MGI Symbol;Acc:MGI:5453964]
37. Gm26541 ENSMUSG00000097889 156 0.838 - - - - - 0.838 predicted gene, 26541 [Source:MGI Symbol;Acc:MGI:5477035]
38. Rims1 ENSMUSG00000041670, ENSMUSG00000111628 268 0.838 - - - - - 0.838 regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
39. Dolk ENSMUSG00000075419 311 0.836 - - - - - 0.836 dolichol kinase [Source:MGI Symbol;Acc:MGI:2677836]
40. Mlf1ip Mlf1ip 320 0.836 - - - - - 0.836
41. Gm12108 ENSMUSG00000086386 71 0.836 - - - - - 0.836 predicted gene 12108 [Source:MGI Symbol;Acc:MGI:3651176]
42. Bmx ENSMUSG00000031377 31 0.835 - - - - - 0.835 BMX non-receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:1101778]
43. Ryr2 ENSMUSG00000021313 35 0.833 - - - - - 0.833 ryanodine receptor 2, cardiac [Source:MGI Symbol;Acc:MGI:99685]
44. Zfyve28 ENSMUSG00000037224 70 0.832 - - - - - 0.832 zinc finger, FYVE domain containing 28 [Source:MGI Symbol;Acc:MGI:2684992]
45. Tmc6 ENSMUSG00000025572 215 0.832 - - - - - 0.832 transmembrane channel-like gene family 6 [Source:MGI Symbol;Acc:MGI:1098686]
46. 3110056K07Rik ENSMUSG00000085622 67 0.83 - - - - - 0.830 RIKEN cDNA 3110056K07 gene [Source:MGI Symbol;Acc:MGI:1920454]
47. Bbs4 ENSMUSG00000025235 262 0.829 - - - - - 0.829 Bardet-Biedl syndrome 4 (human) [Source:MGI Symbol;Acc:MGI:2143311]
48. Hbegf ENSMUSG00000024486 111 0.827 - - - - - 0.827 heparin-binding EGF-like growth factor [Source:MGI Symbol;Acc:MGI:96070]
49. Hspe1-ps5 ENSMUSG00000084213 1025 0.823 - - - - - 0.823 heat shock protein 1 (chaperonin 10), pseudogene 5 [Source:MGI Symbol;Acc:MGI:1935166]
50. Mir1946b ENSMUSG00000088478 103 0.823 - - - - - 0.823 microRNA 1946b [Source:MGI Symbol;Acc:MGI:3837217]
51. Erf ENSMUSG00000040857 286 0.823 - - - - - 0.823 Ets2 repressor factor [Source:MGI Symbol;Acc:MGI:109637]
52. Pik3cd ENSMUSG00000039936 287 0.822 - - - - - 0.822 phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:MGI Symbol;Acc:MGI:1098211]
53. Pkmyt1 ENSMUSG00000023908 178 0.821 - - - - - 0.821 protein kinase, membrane associated tyrosine/threonine 1 [Source:MGI Symbol;Acc:MGI:2137630]
54. St7 ENSMUSG00000029534 1415 0.82 - - - - - 0.820 suppression of tumorigenicity 7 [Source:MGI Symbol;Acc:MGI:1927450]
55. Gm2990 ENSMUSG00000097794 46 0.819 - - - - - 0.819 predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
56. Hps4 ENSMUSG00000042328 481 0.819 - - - - - 0.819 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:MGI Symbol;Acc:MGI:2177742]
57. Gm15708 ENSMUSG00000086894 110 0.818 - - - - - 0.818 predicted gene 15708 [Source:MGI Symbol;Acc:MGI:3783149]
58. Ano3 ENSMUSG00000074968 139 0.817 - - - - - 0.817 anoctamin 3 [Source:MGI Symbol;Acc:MGI:3613666]
59. Slc16a13 ENSMUSG00000044367 191 0.814 - - - - - 0.814 solute carrier family 16 (monocarboxylic acid transporters), member 13 [Source:MGI Symbol;Acc:MGI:1916559]
60. Stx4a ENSMUSG00000030805 339 0.814 - - - - - 0.814 syntaxin 4A (placental) [Source:MGI Symbol;Acc:MGI:893577]
61. Mfsd1 ENSMUSG00000027775 1963 0.814 - - - - - 0.814 major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
62. Wdr13 ENSMUSG00000031166 538 0.812 - - - - - 0.812 WD repeat domain 13 [Source:MGI Symbol;Acc:MGI:1914661]
63. E2f2 ENSMUSG00000018983 607 0.809 - - - - - 0.809 E2F transcription factor 2 [Source:MGI Symbol;Acc:MGI:1096341]
64. Trap1 ENSMUSG00000005981 998 0.805 - - - - - 0.805 TNF receptor-associated protein 1 [Source:MGI Symbol;Acc:MGI:1915265]
65. Stxbp5 ENSMUSG00000019790 377 0.804 - - - - - 0.804 syntaxin binding protein 5 (tomosyn) [Source:MGI Symbol;Acc:MGI:1926058]
66. Lyl1 ENSMUSG00000034041 123 0.804 - - - - - 0.804 lymphoblastomic leukemia 1 [Source:MGI Symbol;Acc:MGI:96891]
67. Tbx4 ENSMUSG00000000094 350 0.8 - - - - - 0.800 T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
68. Lst1 ENSMUSG00000073412 238 0.798 - - - - - 0.798 leukocyte specific transcript 1 [Source:MGI Symbol;Acc:MGI:1096324]
69. Cbfa2t3 ENSMUSG00000006362 817 0.798 - - - - - 0.798 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
70. Btbd11 ENSMUSG00000020042 123 0.796 - - - - - 0.796 BTB (POZ) domain containing 11 [Source:MGI Symbol;Acc:MGI:1921257]
71. Polr3f ENSMUSG00000027427 1574 0.795 - - - - - 0.795 polymerase (RNA) III (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1924086]
72. 4632404H12Rik ENSMUSG00000042579 118 0.794 - - - - - 0.794 RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
73. Micall2 ENSMUSG00000036718 130 0.793 - - - - - 0.793 MICAL-like 2 [Source:MGI Symbol;Acc:MGI:2444818]
74. Myo1b ENSMUSG00000018417 2574 0.792 - - - - - 0.792 myosin IB [Source:MGI Symbol;Acc:MGI:107752]
75. Capn5 ENSMUSG00000035547 387 0.79 - - - - - 0.790 calpain 5 [Source:MGI Symbol;Acc:MGI:1100859]
76. Urb2 ENSMUSG00000031976 200 0.789 - - - - - 0.789 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2681124]
77. Clock ENSMUSG00000029238 219 0.788 - - - - - 0.788 circadian locomotor output cycles kaput [Source:MGI Symbol;Acc:MGI:99698]
78. Mrps11 ENSMUSG00000030611 623 0.783 - - - - - 0.783 mitochondrial ribosomal protein S11 [Source:MGI Symbol;Acc:MGI:1915244]
79. Gm24056 ENSMUSG00000089242 346 0.779 - - - - - 0.779 predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
80. D11Wsu47e ENSMUSG00000041623 414 0.778 - - - - - 0.778 DNA segment, Chr 11, Wayne State University 47, expressed [Source:MGI Symbol;Acc:MGI:106356]
81. Cpxm1 ENSMUSG00000027408 401 0.778 - - - - - 0.778 carboxypeptidase X 1 (M14 family) [Source:MGI Symbol;Acc:MGI:1934569]
82. Ndst1 ENSMUSG00000054008 3007 0.776 - - - - - 0.776 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 [Source:MGI Symbol;Acc:MGI:104719]
83. Vps37d ENSMUSG00000043614 725 0.776 - - - - - 0.776 vacuolar protein sorting 37D [Source:MGI Symbol;Acc:MGI:2159402]
84. Akap8l ENSMUSG00000002625 366 0.775 - - - - - 0.775 A kinase (PRKA) anchor protein 8-like [Source:MGI Symbol;Acc:MGI:1860606]
85. Enthd2 271 0.772 - - - - - 0.772 ENTH domain containing 2, transcript variant X3
86. Pcdh11x ENSMUSG00000034755 188 0.771 - - - - - 0.771 protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]
87. Ddr1 ENSMUSG00000003534 901 0.769 - - - - - 0.769 discoidin domain receptor family, member 1 [Source:MGI Symbol;Acc:MGI:99216]
88. Ncam2 ENSMUSG00000022762 102 0.768 - - - - - 0.768 neural cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:97282]
89. Cwf19l1 ENSMUSG00000025200 775 0.766 - - - - - 0.766 CWF19-like 1, cell cycle control (S. pombe) [Source:MGI Symbol;Acc:MGI:1919752]
90. Entpd7 ENSMUSG00000025192 564 0.763 - - - - - 0.763 ectonucleoside triphosphate diphosphohydrolase 7 [Source:MGI Symbol;Acc:MGI:2135885]
91. Dbndd1 ENSMUSG00000031970 176 0.763 - - - - - 0.763 dysbindin (dystrobrevin binding protein 1) domain containing 1 [Source:MGI Symbol;Acc:MGI:1919435]
92. Itfg2 ENSMUSG00000001518 1233 0.759 - - - - - 0.759 integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
93. Mettl4 ENSMUSG00000055660 370 0.759 - - - - - 0.759 methyltransferase like 4 [Source:MGI Symbol;Acc:MGI:1924031]
94. Rab13 ENSMUSG00000027935 658 0.757 - - - - - 0.757 RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232]
95. 1110034G24Rik 289 0.757 - - - - - 0.757 RIKEN cDNA 1110034G24 gene, transcript variant X6
96. Coro7 ENSMUSG00000039637 293 0.756 - - - - - 0.756 coronin 7 [Source:MGI Symbol;Acc:MGI:1926135]
97. Pcdhb4 ENSMUSG00000045689 55 0.756 - - - - - 0.756 protocadherin beta 4 [Source:MGI Symbol;Acc:MGI:2136738]
98. Dcp1a ENSMUSG00000021962 1370 0.756 - - - - - 0.756 decapping mRNA 1A [Source:MGI Symbol;Acc:MGI:1923151]
99. Akap5 ENSMUSG00000021057 246 0.756 - - - - - 0.756 A kinase (PRKA) anchor protein 5 [Source:MGI Symbol;Acc:MGI:2685104]
100. Gm23935 ENSMUSG00000076258 362 0.756 - - - - - 0.756 predicted gene, 23935 [Source:MGI Symbol;Acc:MGI:5453712]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA