Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rai2

Gene Name Gene ID Reads Annotation
Rai2 ENSMUSG00000043518 113 retinoic acid induced 2 [Source:MGI Symbol;Acc:MGI:1344378]







Genes with expression patterns similar to Rai2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rai2 ENSMUSG00000043518 113 6 1.000 1.000 1.000 1.000 1.000 1.000 retinoic acid induced 2 [Source:MGI Symbol;Acc:MGI:1344378]
2. Gm12278 ENSMUSG00000086310 5 0.991 0.991 - - - - - predicted gene 12278 [Source:MGI Symbol;Acc:MGI:3650383]
3. Gm26690 ENSMUSG00000097751 7 0.991 0.991 - - - - - predicted gene, 26690 [Source:MGI Symbol;Acc:MGI:5477184]
4. Gm13007 ENSMUSG00000083852 5 0.991 0.991 - - - - - predicted gene 13007 [Source:MGI Symbol;Acc:MGI:3649722]
5. Pabpn1l ENSMUSG00000069867 6 0.991 0.991 - - - - - poly(A)binding protein nuclear 1-like [Source:MGI Symbol;Acc:MGI:2685954]
6. Hist1h2bh ENSMUSG00000114456 25 0.991 0.991 - - - - - histone cluster 1, H2bh [Source:MGI Symbol;Acc:MGI:2448387]
7. Gm16305 ENSMUSG00000085361 7 0.991 0.991 - - - - - predicted gene 16305 [Source:MGI Symbol;Acc:MGI:3826519]
8. 4930577N17Rik ENSMUSG00000087440 9 0.991 0.991 - - - - - RIKEN cDNA 4930577N17 gene [Source:MGI Symbol;Acc:MGI:1914996]
9. Nefh ENSMUSG00000020396 31 0.987 0.987 - - - - - neurofilament, heavy polypeptide [Source:MGI Symbol;Acc:MGI:97309]
10. Noxo1 ENSMUSG00000019320 15 0.987 0.987 - - - - - NADPH oxidase organizer 1 [Source:MGI Symbol;Acc:MGI:1919143]
11. C1qtnf2 ENSMUSG00000046491 14 0.986 0.986 - - - - - C1q and tumor necrosis factor related protein 2 [Source:MGI Symbol;Acc:MGI:1916433]
12. Gm12892 ENSMUSG00000083679, ENSMUSG00000116060 11 0.986 0.986 - - - - - predicted gene 12892 [Source:MGI Symbol;Acc:MGI:3649649]
13. Ebi3 ENSMUSG00000003206 34 0.985 0.985 - - - - - Epstein-Barr virus induced gene 3 [Source:MGI Symbol;Acc:MGI:1354171]
14. Gm5083 ENSMUSG00000089815 11 0.982 0.982 - - - - - predicted gene 5083 [Source:MGI Symbol;Acc:MGI:3779454]
15. Muc16 ENSMUSG00000109564 14 0.982 0.982 - - - - - mucin 16 [Source:MGI Symbol;Acc:MGI:1920982]
16. Gm10268 ENSMUSG00000066475 14 0.98 0.980 - - - - - predicted gene 10268 [Source:MGI Symbol;Acc:MGI:3642637]
17. Gm1815 Gm1815 49 0.977 0.977 - - - - -
18. Gabrb2 ENSMUSG00000007653 18 0.972 0.972 - - - - - gamma-aminobutyric acid (GABA) A receptor, subunit beta 2 [Source:MGI Symbol;Acc:MGI:95620]
19. Dner ENSMUSG00000036766 209 0.969 0.969 - - - - - delta/notch-like EGF repeat containing [Source:MGI Symbol;Acc:MGI:2152889]
20. Gm12500 ENSMUSG00000056411 17 0.967 0.967 - - - - - predicted gene 12500 [Source:MGI Symbol;Acc:MGI:3650304]
21. 6330403A02Rik 6330403A02Rik 84 0.965 0.965 - - - - -
22. Trp73 ENSMUSG00000029026 14 0.962 0.962 - - - - - transformation related protein 73 [Source:MGI Symbol;Acc:MGI:1336991]
23. Ccdc79 Ccdc79 24 0.958 0.958 - - - - -
24. Arx ENSMUSG00000035277 216 0.956 0.956 - - - - - aristaless related homeobox [Source:MGI Symbol;Acc:MGI:1097716]
25. Fam221a ENSMUSG00000047115 190 0.952 0.952 - - - - - family with sequence similarity 221, member A [Source:MGI Symbol;Acc:MGI:2442161]
26. Gm13328 ENSMUSG00000081128 29 0.949 0.949 - - - - - predicted gene 13328 [Source:MGI Symbol;Acc:MGI:3651185]
27. Nxnl2 ENSMUSG00000021396 29 0.943 0.943 - - - - - nucleoredoxin-like 2 [Source:MGI Symbol;Acc:MGI:1922374]
28. Phf19 ENSMUSG00000026873 83 0.939 0.939 - - - - - PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
29. 4930579K19Rik ENSMUSG00000051074 42 0.933 0.933 - - - - - RIKEN cDNA 4930579K19 gene [Source:MGI Symbol;Acc:MGI:1923131]
30. Gm10780 ENSMUSG00000074877 28 0.929 0.929 - - - - - predicted gene 10780 [Source:MGI Symbol;Acc:MGI:3642422]
31. Ppp1r36 ENSMUSG00000052221 97 0.914 0.914 - - - - - protein phosphatase 1, regulatory subunit 36 [Source:MGI Symbol;Acc:MGI:2684916]
32. RP23-279M5.3 RP23-279M5.3 61 0.911 0.911 - - - - -
33. Scx ENSMUSG00000034161 568 0.91 0.910 - - - - - scleraxis [Source:MGI Symbol;Acc:MGI:102934]
34. Nap1l3 ENSMUSG00000055733 142 0.908 0.908 - - - - - nucleosome assembly protein 1-like 3 [Source:MGI Symbol;Acc:MGI:1859565]
35. Kcnb2 ENSMUSG00000092083 169 0.904 0.904 - - - - - potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632]
36. Srsf4 ENSMUSG00000028911 20 0.904 0.904 - - - - - serine/arginine-rich splicing factor 4 [Source:MGI Symbol;Acc:MGI:1890577]
37. Aldh1l1 ENSMUSG00000030088 18 0.903 0.903 - - - - - aldehyde dehydrogenase 1 family, member L1 [Source:MGI Symbol;Acc:MGI:1340024]
38. A430108G06Rik ENSMUSG00000086851 21 0.9 0.900 - - - - - RIKEN cDNA A430108G06 gene [Source:MGI Symbol;Acc:MGI:2442478]
39. Parp8 ENSMUSG00000021725 131 0.898 0.898 - - - - - poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]
40. 1810059H22Rik ENSMUSG00000108207 50 0.898 0.898 - - - - - RIKEN cDNA 1810059H22 gene [Source:MGI Symbol;Acc:MGI:1917070]
41. Gm12346 ENSMUSG00000083899 95 0.895 0.895 - - - - - predicted gene 12346 [Source:MGI Symbol;Acc:MGI:3649810]
42. Cdkl1 ENSMUSG00000020990 57 0.894 0.894 - - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:MGI Symbol;Acc:MGI:1918341]
43. Rpl21-ps12 ENSMUSG00000058700 44 0.894 0.894 - - - - - ribosomal protein L21, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3648214]
44. Kcnq1 ENSMUSG00000009545 68 0.891 0.891 - - - - - potassium voltage-gated channel, subfamily Q, member 1 [Source:MGI Symbol;Acc:MGI:108083]
45. Grid1 ENSMUSG00000041078 96 0.889 0.889 - - - - - glutamate receptor, ionotropic, delta 1 [Source:MGI Symbol;Acc:MGI:95812]
46. Zfp955b ENSMUSG00000096910 40 0.885 0.885 - - - - - zinc finger protein 955B [Source:MGI Symbol;Acc:MGI:4834573]
47. Spink10 ENSMUSG00000044176 93 0.882 0.882 - - - - - serine peptidase inhibitor, Kazal type 10 [Source:MGI Symbol;Acc:MGI:3584533]
48. Rnf207 ENSMUSG00000058498 72 0.882 0.882 - - - - - ring finger protein 207 [Source:MGI Symbol;Acc:MGI:2684989]
49. Gm12396 ENSMUSG00000056412 174 0.879 0.879 - - - - - predicted gene 12396 [Source:MGI Symbol;Acc:MGI:3649201]
50. 2900011O08Rik ENSMUSG00000044117 284 0.876 0.876 - - - - - RIKEN cDNA 2900011O08 gene [Source:MGI Symbol;Acc:MGI:1914504]
51. Gm10020 ENSMUSG00000057262 87 0.875 0.875 - - - - - predicted pseudogene 10020 [Source:MGI Symbol;Acc:MGI:3642192]
52. Muc1 ENSMUSG00000042784 30 0.874 0.874 - - - - - mucin 1, transmembrane [Source:MGI Symbol;Acc:MGI:97231]
53. Gm5436 ENSMUSG00000042962 199 0.872 0.872 - - - - - predicted pseudogene 5436 [Source:MGI Symbol;Acc:MGI:3643291]
54. Zswim1 ENSMUSG00000017764 460 0.87 0.870 - - - - - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
55. Pkn1 ENSMUSG00000057672 59 0.87 0.870 - - - - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
56. Per2 ENSMUSG00000055866 255 0.869 0.869 - - - - - period circadian clock 2 [Source:MGI Symbol;Acc:MGI:1195265]
57. L1td1 ENSMUSG00000087166 81 0.868 0.868 - - - - - LINE-1 type transposase domain containing 1 [Source:MGI Symbol;Acc:MGI:3578435]
58. Zfp773 ENSMUSG00000063535 54 0.866 0.866 - - - - - zinc finger protein 773 [Source:MGI Symbol;Acc:MGI:1923623]
59. Acot8 ENSMUSG00000017307 64 0.857 0.857 - - - - - acyl-CoA thioesterase 8 [Source:MGI Symbol;Acc:MGI:2158201]
60. Gm15270 ENSMUSG00000087400 138 0.856 0.856 - - - - - predicted gene 15270 [Source:MGI Symbol;Acc:MGI:3705149]
61. Rpl31-ps17 ENSMUSG00000072255 48 0.853 0.853 - - - - - ribosomal protein L31, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3648194]
62. Gm15538 ENSMUSG00000083579 231 0.853 0.853 - - - - - predicted gene 15538 [Source:MGI Symbol;Acc:MGI:3782986]
63. Vwa2 ENSMUSG00000025082 83 0.851 0.851 - - - - - von Willebrand factor A domain containing 2 [Source:MGI Symbol;Acc:MGI:2684334]
64. Rps12-ps5 ENSMUSG00000081565 43 0.845 0.845 - - - - - ribosomal protein S12, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3644977]
65. Acadvl ENSMUSG00000018574 78 0.844 0.844 - - - - - acyl-Coenzyme A dehydrogenase, very long chain [Source:MGI Symbol;Acc:MGI:895149]
66. Dok2 ENSMUSG00000022102 193 0.843 0.843 - - - - - docking protein 2 [Source:MGI Symbol;Acc:MGI:1332623]
67. Pcdhb22 ENSMUSG00000073591 244 0.843 0.843 - - - - - protocadherin beta 22 [Source:MGI Symbol;Acc:MGI:2136760]
68. Gm23553 ENSMUSG00000088442 31 0.838 0.838 - - - - - predicted gene, 23553 [Source:MGI Symbol;Acc:MGI:5453330]
69. Rnf223 ENSMUSG00000110404 72 0.836 0.836 - - - - - ring finger 223 [Source:MGI Symbol;Acc:MGI:3588193]
70. Atf3 ENSMUSG00000026628 91 0.834 0.834 - - - - - activating transcription factor 3 [Source:MGI Symbol;Acc:MGI:109384]
71. Negr1 ENSMUSG00000040037 312 0.826 0.826 - - - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
72. Fam78a ENSMUSG00000050592 122 0.823 0.823 - - - - - family with sequence similarity 78, member A [Source:MGI Symbol;Acc:MGI:2443569]
73. Adamts4 ENSMUSG00000006403 130 0.82 0.820 - - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
74. Mc2r ENSMUSG00000045569 124 0.818 0.818 - - - - - melanocortin 2 receptor [Source:MGI Symbol;Acc:MGI:96928]
75. Igsf11 ENSMUSG00000022790 190 0.818 0.818 - - - - - immunoglobulin superfamily, member 11 [Source:MGI Symbol;Acc:MGI:2388477]
76. Rel ENSMUSG00000020275 25 0.817 0.817 - - - - - reticuloendotheliosis oncogene [Source:MGI Symbol;Acc:MGI:97897]
77. Pmm1 ENSMUSG00000022474 314 0.813 0.813 - - - - - phosphomannomutase 1 [Source:MGI Symbol;Acc:MGI:1353418]
78. Slc43a2 ENSMUSG00000038178 401 0.811 0.811 - - - - - solute carrier family 43, member 2 [Source:MGI Symbol;Acc:MGI:2442746]
79. Tbc1d8b ENSMUSG00000042473 47 0.801 - - 0.801 - - - TBC1 domain family, member 8B [Source:MGI Symbol;Acc:MGI:1918101]
80. Rps3a3 ENSMUSG00000059751 396 0.8 - - 0.800 - - - ribosomal protein S3A3 [Source:MGI Symbol;Acc:MGI:3643406]
81. Spata33 ENSMUSG00000048478 37 0.798 - - 0.798 - - - spermatogenesis associated 33 [Source:MGI Symbol;Acc:MGI:2444920]
82. Smim1 ENSMUSG00000078350 279 0.796 0.796 - - - - - small integral membrane protein 1 [Source:MGI Symbol;Acc:MGI:1916109]
83. Lrrc20 ENSMUSG00000037151 208 0.795 0.795 - - - - - leucine rich repeat containing 20 [Source:MGI Symbol;Acc:MGI:2387182]
84. RP24-288C12.6 RP24-288C12.6 17 0.792 - - 0.792 - - -
85. Zfp459 ENSMUSG00000055560 303 0.79 0.790 - - - - - zinc finger protein 459 [Source:MGI Symbol;Acc:MGI:3040701]
86. Fmo1 ENSMUSG00000040181 39 0.79 - - 0.790 - - - flavin containing monooxygenase 1 [Source:MGI Symbol;Acc:MGI:1310002]
87. Gm8787 7 0.788 - - 0.788 - - - predicted gene 8787
88. Chml ENSMUSG00000078185 7 0.788 - - 0.788 - - - choroideremia-like [Source:MGI Symbol;Acc:MGI:101913]
89. Khdrbs2 ENSMUSG00000026058 8 0.788 - - 0.788 - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:MGI Symbol;Acc:MGI:2159649]
90. Vmn2r18 ENSMUSG00000091794 10 0.788 - - 0.788 - - - vomeronasal 2, receptor 18 [Source:MGI Symbol;Acc:MGI:3645314]
91. Gm15982 ENSMUSG00000084132 5 0.788 - - 0.788 - - - predicted gene 15982 [Source:MGI Symbol;Acc:MGI:3801722]
92. Trpm2 ENSMUSG00000009292 9 0.788 - - 0.788 - - - transient receptor potential cation channel, subfamily M, member 2 [Source:MGI Symbol;Acc:MGI:1351901]
93. Galns ENSMUSG00000015027 121 0.787 0.787 - - - - - galactosamine (N-acetyl)-6-sulfate sulfatase [Source:MGI Symbol;Acc:MGI:1355303]
94. Clec4g ENSMUSG00000074491 17 0.787 - - 0.787 - - - C-type lectin domain family 4, member g [Source:MGI Symbol;Acc:MGI:1923113]
95. Npbwr1 ENSMUSG00000033774 44 0.787 0.787 - - - - - neuropeptides B/W receptor 1 [Source:MGI Symbol;Acc:MGI:891989]
96. Gm13034 ENSMUSG00000082195 11 0.786 - - 0.786 - - - predicted gene 13034 [Source:MGI Symbol;Acc:MGI:3650252]
97. Vmn1r-ps128 ENSMUSG00000084315 7 0.785 - - 0.785 - - - vomeronasal 1 receptor, pseudogene 128 [Source:MGI Symbol;Acc:MGI:3651039]
98. 9530026P05Rik ENSMUSG00000097462 31 0.785 0.785 - - - - - RIKEN cDNA 9530026P05 gene [Source:MGI Symbol;Acc:MGI:1924659]
99. 2900005J15Rik ENSMUSG00000043833 31 0.785 - - 0.785 - - - RIKEN cDNA 2900005J15 gene [Source:MGI Symbol;Acc:MGI:1914511]
100. Klf8 ENSMUSG00000041649 99 0.784 0.784 - - - - - Kruppel-like factor 8 [Source:MGI Symbol;Acc:MGI:2442430]

There are 90 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA