Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rag1

Gene Name Gene ID Reads Annotation
Rag1 ENSMUSG00000061311 2 recombination activating gene 1 [Source:MGI Symbol;Acc:MGI:97848]







Genes with expression patterns similar to Rag1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rag1 ENSMUSG00000061311 2 3 - 1.000 - - 1.000 1.000 recombination activating gene 1 [Source:MGI Symbol;Acc:MGI:97848]
2. Gm4219 ENSMUSG00000091378 2 1.916 - - - - 1.000 0.916 predicted gene 4219 [Source:MGI Symbol;Acc:MGI:3782395]
3. Gm19967 ENSMUSG00000093858 65 1 - 1.000 - - - - predicted gene, 19967 [Source:MGI Symbol;Acc:MGI:5012152]
4. Gm8649 ENSMUSG00000097669 5 1 - - - - - 1.000 predicted gene 8649 [Source:MGI Symbol;Acc:MGI:3644257]
5. Gm27027 ENSMUSG00000098004 1 1 - - - - - 1.000 predicted gene, 27027 [Source:MGI Symbol;Acc:MGI:5504142]
6. Fbxw10 ENSMUSG00000090173 1 1 - - - - 1.000 - F-box and WD-40 domain protein 10 [Source:MGI Symbol;Acc:MGI:3052463]
7. Plcd4 ENSMUSG00000026173 6 1 - - - - 1.000 - phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
8. Gm26843 ENSMUSG00000110559 12 1 - - - - 1.000 - predicted gene, 26843 [Source:MGI Symbol;Acc:MGI:5477337]
9. Ccnb1ip1 ENSMUSG00000071470 5 1 - 1.000 - - - - cyclin B1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2685134]
10. Proca1 ENSMUSG00000044122 39 1 - 1.000 - - - - protein interacting with cyclin A1 [Source:MGI Symbol;Acc:MGI:1918274]
11. Gm15878 ENSMUSG00000087542 3 1 - 1.000 - - - - predicted gene 15878 [Source:MGI Symbol;Acc:MGI:3801745]
12. Gm11867 ENSMUSG00000087402 6 1 - 1.000 - - - - predicted gene 11867 [Source:MGI Symbol;Acc:MGI:3650506]
13. Gm6054 ENSMUSG00000057157 2 1 - - - - 1.000 - predicted gene 6054 [Source:MGI Symbol;Acc:MGI:3645581]
14. Dpy19l2 ENSMUSG00000085576 2 1 - - - - - 1.000 dpy-19-like 2 (C. elegans) [Source:MGI Symbol;Acc:MGI:2444662]
15. BC046251 ENSMUSG00000086662 5 1 - 1.000 - - - - cDNA sequence BC046251 [Source:MGI Symbol;Acc:MGI:3039598]
16. Gm5083 ENSMUSG00000089815 11 1 - 1.000 - - - - predicted gene 5083 [Source:MGI Symbol;Acc:MGI:3779454]
17. Gm6434 ENSMUSG00000091233 4 1 - - - - 1.000 - predicted gene 6434 [Source:MGI Symbol;Acc:MGI:3648424]
18. Spata2l ENSMUSG00000033594 23 1 - 1.000 - - - - spermatogenesis associated 2-like [Source:MGI Symbol;Acc:MGI:1926029]
19. Tbr1 ENSMUSG00000035033 11 1 - 1.000 - - - - T-box brain gene 1 [Source:MGI Symbol;Acc:MGI:107404]
20. Atg4a-ps ENSMUSG00000087119 2 1 - - - - 1.000 - autophagy related 4A, pseudogene [Source:MGI Symbol;Acc:MGI:3615624]
21. 3830417A13Rik ENSMUSG00000031179 13 1 - - - - 1.000 - RIKEN cDNA 3830417A13 gene [Source:MGI Symbol;Acc:MGI:1917946]
22. Fam122c ENSMUSG00000036013 7 1 - - - - 1.000 - family with sequence similarity 122, member C [Source:MGI Symbol;Acc:MGI:1921116]
23. Gm26016 ENSMUSG00000077591 2 1 - - - - - 1.000 predicted gene, 26016 [Source:MGI Symbol;Acc:MGI:5455793]
24. Sprn ENSMUSG00000045733 11 1 - 1.000 - - - - shadow of prion protein [Source:MGI Symbol;Acc:MGI:3582583]
25. C330006D17Rik C330006D17Rik 11 1 - - - - - 1.000
26. Gm20472 ENSMUSG00000092465 1 1 - - - - 1.000 - predicted gene 20472 [Source:MGI Symbol;Acc:MGI:5141937]
27. Snord100 ENSMUSG00000080486 1 1 - - - - 1.000 - small nucleolar RNA, C/D box 100 [Source:MGI Symbol;Acc:MGI:3819514]
28. Gm22228 ENSMUSG00000087989 3 1 - 1.000 - - - - predicted gene, 22228 [Source:MGI Symbol;Acc:MGI:5452005]
29. Bpifb6 ENSMUSG00000068009 1 1 - - - - - 1.000 BPI fold containing family B, member 6 [Source:MGI Symbol;Acc:MGI:2684965]
30. Gm26613 ENSMUSG00000097020 7 1 - 1.000 - - - - predicted gene, 26613 [Source:MGI Symbol;Acc:MGI:5477107]
31. Gm26852 ENSMUSG00000097231 9 1 - 1.000 - - - - predicted gene, 26852 [Source:MGI Symbol;Acc:MGI:5477346]
32. Gm25581 ENSMUSG00000065344 1 1 - - - - - 1.000 predicted gene, 25581 [Source:MGI Symbol;Acc:MGI:5455358]
33. Ms4a1 ENSMUSG00000024673 3 1 - - - - 1.000 - membrane-spanning 4-domains, subfamily A, member 1 [Source:MGI Symbol;Acc:MGI:88321]
34. KCNQ1OT1 KCNQ1OT1 1 1 - - - - 1.000 -
35. Ccdc24 ENSMUSG00000078588 8 1 - - - - - 1.000 coiled-coil domain containing 24 [Source:MGI Symbol;Acc:MGI:2685874]
36. Pklr ENSMUSG00000041237 3 1 - - - - 1.000 - pyruvate kinase liver and red blood cell [Source:MGI Symbol;Acc:MGI:97604]
37. Trim30e-ps1 ENSMUSG00000073929 3 1 - - - - 1.000 - tripartite motif-containing 30E, pseudogene 1 [Source:MGI Symbol;Acc:MGI:4821258]
38. Tmem182 ENSMUSG00000079588 3 1 - 1.000 - - - - transmembrane protein 182 [Source:MGI Symbol;Acc:MGI:1923725]
39. Gm11983 ENSMUSG00000099102 1 1 - 1.000 - - - - predicted gene 11983 [Source:MGI Symbol;Acc:MGI:3650519]
40. Styxl1 ENSMUSG00000019178 1 1 - 1.000 - - - - serine/threonine/tyrosine interacting-like 1 [Source:MGI Symbol;Acc:MGI:1923821]
41. 2510003D18Rik 2510003D18Rik 15 1 - 1.000 - - - -
42. Pllp ENSMUSG00000031775 2 1 - 1.000 - - - - plasma membrane proteolipid [Source:MGI Symbol;Acc:MGI:1915051]
43. Olfr895 ENSMUSG00000096427 1 1 - - - - 1.000 - olfactory receptor 895 [Source:MGI Symbol;Acc:MGI:3030729]
44. Galntl5 ENSMUSG00000028938 2 1 - - - - - 1.000 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 [Source:MGI Symbol;Acc:MGI:1915159]
45. AF251705 AF251705 7 1 - - - - 1.000 -
46. Gm12280 ENSMUSG00000085748 8 1 - - - - 1.000 - predicted gene 12280 [Source:MGI Symbol;Acc:MGI:3652011]
47. BC035947 ENSMUSG00000090486 2 1 - - - - - 1.000 cDNA sequence BC035947 [Source:MGI Symbol;Acc:MGI:2652858]
48. Gm5689 ENSMUSG00000034339 1 1 - - - - - 1.000 predicted gene 5689 [Source:MGI Symbol;Acc:MGI:3647214]
49. Gm22328 ENSMUSG00000088699 1 1 - - - - 1.000 - predicted gene, 22328 [Source:MGI Symbol;Acc:MGI:5452105]
50. Rps13-ps5 ENSMUSG00000082626 4 1 - - - - 1.000 - ribosomal protein S13, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3650602]
51. Gm5406 ENSMUSG00000080715 3 1 - - - - - 1.000 predicted gene 5406 [Source:MGI Symbol;Acc:MGI:3645119]
52. Gm25117 ENSMUSG00000087819 11 1 - - - - - 1.000 predicted gene, 25117 [Source:MGI Symbol;Acc:MGI:5454894]
53. Gm14425 ENSMUSG00000081156 4 1 - - - - 1.000 - predicted gene 14425 [Source:MGI Symbol;Acc:MGI:3652020]
54. Gm14863 ENSMUSG00000083608 1 1 - 1.000 - - - - predicted gene 14863 [Source:MGI Symbol;Acc:MGI:3705489]
55. Fabp12 ENSMUSG00000027530 1 1 - - - - 1.000 - fatty acid binding protein 12 [Source:MGI Symbol;Acc:MGI:1922747]
56. 1700027A07Rik ENSMUSG00000084864 4 1 - - - - - 1.000 RIKEN cDNA 1700027A07 gene [Source:MGI Symbol;Acc:MGI:1917246]
57. Vmn2r-ps18 ENSMUSG00000094849 6 1 - 1.000 - - - - vomeronasal 2, receptor, pseudogene 18 [Source:MGI Symbol;Acc:MGI:3761373]
58. Gm16064 ENSMUSG00000085345 11 1 - - - - 1.000 - predicted gene 16064 [Source:MGI Symbol;Acc:MGI:3801956]
59. Gm25360 ENSMUSG00000094655 11 1 - 1.000 - - - - predicted gene, 25360 [Source:MGI Symbol;Acc:MGI:5455137]
60. Gm13446 ENSMUSG00000086555 1 1 - - - - - 1.000 predicted gene 13446 [Source:MGI Symbol;Acc:MGI:3649869]
61. Gm15441 ENSMUSG00000074398 6 1 - - - - - 1.000 predicted gene 15441 [Source:MGI Symbol;Acc:MGI:3641753]
62. 4933408N05Rik ENSMUSG00000084848 1 1 - 1.000 - - - - RIKEN cDNA 4933408N05 gene [Source:MGI Symbol;Acc:MGI:1918372]
63. Gm22808 ENSMUSG00000064670 1 1 - - - - 1.000 - predicted gene, 22808 [Source:MGI Symbol;Acc:MGI:5452585]
64. Six3 ENSMUSG00000038805 20 1 - 1.000 - - - - sine oculis-related homeobox 3 [Source:MGI Symbol;Acc:MGI:102764]
65. Apol11b ENSMUSG00000091694 4 1 - - - - 1.000 - apolipoprotein L 11b [Source:MGI Symbol;Acc:MGI:3036248]
66. Gm15680 ENSMUSG00000090116 3 1 - 1.000 - - - - predicted gene 15680 [Source:MGI Symbol;Acc:MGI:3783122]
67. Gm4883 ENSMUSG00000066620 1 1 - - - - 1.000 - predicted gene 4883 [Source:MGI Symbol;Acc:MGI:3643348]
68. Gm17733 ENSMUSG00000097486 1 1 - - - - 1.000 - predicted gene, 17733 [Source:MGI Symbol;Acc:MGI:4937367]
69. Krt77 ENSMUSG00000067594 2 1 - - - - 1.000 - keratin 77 [Source:MGI Symbol;Acc:MGI:3588209]
70. Gm15751 ENSMUSG00000086753 3 1 - 1.000 - - - - predicted gene 15751 [Source:MGI Symbol;Acc:MGI:3783193]
71. Gm13643 Gm13643 3 1 - 1.000 - - - -
72. Tmem211 ENSMUSG00000066964 2 1 - - - - 1.000 - transmembrane protein 211 [Source:MGI Symbol;Acc:MGI:2685700]
73. Gm9506 ENSMUSG00000081086 4 1 - 1.000 - - - - predicted gene 9506 [Source:MGI Symbol;Acc:MGI:3779916]
74. Gm5501 ENSMUSG00000092039 1 1 - - - - 1.000 - predicted gene 5501 [Source:MGI Symbol;Acc:MGI:3644023]
75. Pcdhb11 ENSMUSG00000051486 8 1 - 1.000 - - - - protocadherin beta 11 [Source:MGI Symbol;Acc:MGI:2136746]
76. Fam194a Fam194a 6 1 - 1.000 - - - -
77. Gm15408 ENSMUSG00000086610 8 1 - - - - 1.000 - predicted gene 15408 [Source:MGI Symbol;Acc:MGI:3705101]
78. Pdk4 ENSMUSG00000019577 7 1 - - - - - 1.000 pyruvate dehydrogenase kinase, isoenzyme 4 [Source:MGI Symbol;Acc:MGI:1351481]
79. Ckm ENSMUSG00000030399 8 1 - - - - 1.000 - creatine kinase, muscle [Source:MGI Symbol;Acc:MGI:88413]
80. Gm7887 ENSMUSG00000044211 9 1 - 1.000 - - - - predicted gene 7887 [Source:MGI Symbol;Acc:MGI:3648251]
81. 4930423O20Rik 4930423O20Rik 6 1 - - - - - 1.000
82. Gm22553 ENSMUSG00000088422 1 1 - 1.000 - - - - predicted gene, 22553 [Source:MGI Symbol;Acc:MGI:5452330]
83. Gm13875 ENSMUSG00000081275 2 1 - - - - 1.000 - predicted gene 13875 [Source:MGI Symbol;Acc:MGI:3649350]
84. Nsa2-ps2 ENSMUSG00000083470 2 1 - - - - 1.000 - NSA2 ribosome biogenesis homolog, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3644985]
85. Gm11646 ENSMUSG00000085033 1 1 - - - - 1.000 - predicted gene 11646 [Source:MGI Symbol;Acc:MGI:3649612]
86. Gm26029 ENSMUSG00000089284 1 1 - - - - 1.000 - predicted gene, 26029 [Source:MGI Symbol;Acc:MGI:5455806]
87. Gm11931 ENSMUSG00000082851 1 1 - - - - - 1.000 predicted gene 11931 [Source:MGI Symbol;Acc:MGI:3652123]
88. Kcng4 ENSMUSG00000045246 3 1 - 1.000 - - - - potassium voltage-gated channel, subfamily G, member 4 [Source:MGI Symbol;Acc:MGI:1913983]
89. Nctc1 ENSMUSG00000087090 6 1 - - - - - 1.000 non-coding transcript 1 [Source:MGI Symbol;Acc:MGI:1306816]
90. Mr1 ENSMUSG00000026471 5 1 - 1.000 - - - - major histocompatibility complex, class I-related [Source:MGI Symbol;Acc:MGI:1195463]
91. Gm26857 ENSMUSG00000097860 6 1 - - - - 1.000 - predicted gene, 26857 [Source:MGI Symbol;Acc:MGI:5477351]
92. Dhrs11 ENSMUSG00000034449 8 1 - 1.000 - - - - dehydrogenase/reductase (SDR family) member 11 [Source:MGI Symbol;Acc:MGI:2652816]
93. Gm4518 ENSMUSG00000098123 9 1 - - - - - 1.000 predicted gene 4518 [Source:MGI Symbol;Acc:MGI:3782703]
94. Vmn1r-ps63 ENSMUSG00000092248 2 1 - 1.000 - - - - vomeronasal 1 receptor, pseudogene 63 [Source:MGI Symbol;Acc:MGI:4438458]
95. Tex40 4 1 - - - - 1.000 - testis expressed 40
96. Gm16675 ENSMUSG00000097534 4 1 - - - - - 1.000 predicted gene, 16675 [Source:MGI Symbol;Acc:MGI:4439599]
97. Defb50 ENSMUSG00000058568 1 1 - - - - 1.000 - defensin beta 50 [Source:MGI Symbol;Acc:MGI:3055870]
98. Col4a4 ENSMUSG00000067158 1 1 - 1.000 - - - - collagen, type IV, alpha 4 [Source:MGI Symbol;Acc:MGI:104687]
99. Pus3 ENSMUSG00000032103 9 1 - - - - 1.000 - pseudouridine synthase 3 [Source:MGI Symbol;Acc:MGI:1914299]
100. Gm14690 Gm14690 2 1 - - - - 1.000 -

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA