Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rab5b

Gene Name Gene ID Reads Annotation
Rab5b ENSMUSG00000000711 983 RAB5B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105938]







Genes with expression patterns similar to Rab5b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rab5b ENSMUSG00000000711 983 6 1.000 1.000 1.000 1.000 1.000 1.000 RAB5B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105938]
2. Sfmbt1 ENSMUSG00000006527 1043 0.891 0.891 - - - - - Scm-like with four mbt domains 1 [Source:MGI Symbol;Acc:MGI:1859609]
3. Lyrm4 ENSMUSG00000046573 895 0.89 0.890 - - - - - LYR motif containing 4 [Source:MGI Symbol;Acc:MGI:2683538]
4. Wdr62 ENSMUSG00000037020 234 0.882 0.882 - - - - - WD repeat domain 62 [Source:MGI Symbol;Acc:MGI:1923696]
5. Celf4 ENSMUSG00000024268 1261 0.877 0.877 - - - - - CUGBP, Elav-like family member 4 [Source:MGI Symbol;Acc:MGI:1932407]
6. Tpmt ENSMUSG00000021376 544 0.875 0.875 - - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
7. Nudt17 ENSMUSG00000028100 133 0.875 0.875 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:MGI Symbol;Acc:MGI:1925623]
8. Slc25a25 ENSMUSG00000026819 528 0.874 0.874 - - - - - solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 [Source:MGI Symbol;Acc:MGI:1915913]
9. Cyb561d2 ENSMUSG00000037190 164 0.874 0.874 - - - - - cytochrome b-561 domain containing 2 [Source:MGI Symbol;Acc:MGI:1929280]
10. Mtg1 ENSMUSG00000039018 361 0.873 0.873 - - - - - mitochondrial ribosome-associated GTPase 1 [Source:MGI Symbol;Acc:MGI:2685015]
11. Camk2n1 ENSMUSG00000046447 1492 0.873 0.873 - - - - - calcium/calmodulin-dependent protein kinase II inhibitor 1 [Source:MGI Symbol;Acc:MGI:1913509]
12. Acap2 ENSMUSG00000049076 1853 0.872 0.872 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:MGI Symbol;Acc:MGI:1925868]
13. Arhgap39 ENSMUSG00000033697 968 0.87 0.870 - - - - - Rho GTPase activating protein 39 [Source:MGI Symbol;Acc:MGI:107858]
14. Plcxd3 ENSMUSG00000049148 107 0.869 0.869 - - - - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:MGI Symbol;Acc:MGI:2442605]
15. Pi4kb ENSMUSG00000038861 97 0.868 0.868 - - - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
16. 2810006K23Rik ENSMUSG00000047635 1607 0.868 0.868 - - - - - RIKEN cDNA 2810006K23 gene [Source:MGI Symbol;Acc:MGI:1919900]
17. Sfxn4 ENSMUSG00000063698 313 0.867 0.867 - - - - - sideroflexin 4 [Source:MGI Symbol;Acc:MGI:2137680]
18. L1cam ENSMUSG00000031391 813 0.867 0.867 - - - - - L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
19. Mxd4 ENSMUSG00000037235 1566 0.866 0.866 - - - - - Max dimerization protein 4 [Source:MGI Symbol;Acc:MGI:104991]
20. Rps19bp1 ENSMUSG00000051518 828 0.865 0.865 - - - - - ribosomal protein S19 binding protein 1 [Source:MGI Symbol;Acc:MGI:1913788]
21. Lrcol1 ENSMUSG00000072754 175 0.865 0.865 - - - - - leucine rich colipase-like 1 [Source:MGI Symbol;Acc:MGI:2686525]
22. Ptprm ENSMUSG00000033278 279 0.865 0.865 - - - - - protein tyrosine phosphatase, receptor type, M [Source:MGI Symbol;Acc:MGI:102694]
23. Dolk ENSMUSG00000075419 311 0.864 0.864 - - - - - dolichol kinase [Source:MGI Symbol;Acc:MGI:2677836]
24. Pik3r1 ENSMUSG00000041417 751 0.864 0.864 - - - - - phosphoinositide-3-kinase regulatory subunit 1 [Source:MGI Symbol;Acc:MGI:97583]
25. Entpd7 ENSMUSG00000025192 564 0.864 0.864 - - - - - ectonucleoside triphosphate diphosphohydrolase 7 [Source:MGI Symbol;Acc:MGI:2135885]
26. Sh3bp5 ENSMUSG00000021892 2847 0.862 0.862 - - - - - SH3-domain binding protein 5 (BTK-associated) [Source:MGI Symbol;Acc:MGI:1344391]
27. H6pd ENSMUSG00000028980 296 0.862 0.862 - - - - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:MGI Symbol;Acc:MGI:2140356]
28. Trim59 ENSMUSG00000034317 2969 0.861 0.861 - - - - - tripartite motif-containing 59 [Source:MGI Symbol;Acc:MGI:1914199]
29. Ptpn21 ENSMUSG00000021009 282 0.861 0.861 - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:MGI Symbol;Acc:MGI:1344406]
30. Ranbp17 ENSMUSG00000040594 358 0.861 0.861 - - - - - RAN binding protein 17 [Source:MGI Symbol;Acc:MGI:1929706]
31. 3110082I17Rik ENSMUSG00000053553 775 0.861 0.861 - - - - - RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
32. Fbxo46 ENSMUSG00000050428 225 0.861 0.861 - - - - - F-box protein 46 [Source:MGI Symbol;Acc:MGI:2444918]
33. Mcoln1 ENSMUSG00000004567 281 0.861 0.861 - - - - - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]
34. Cfp ENSMUSG00000001128 267 0.86 0.860 - - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
35. Fam217a ENSMUSG00000021414 138 0.86 0.860 - - - - - family with sequence similarity 217, member A [Source:MGI Symbol;Acc:MGI:1919114]
36. Mrc1 ENSMUSG00000026712 201 0.86 0.860 - - - - - mannose receptor, C type 1 [Source:MGI Symbol;Acc:MGI:97142]
37. Crebrf ENSMUSG00000048249 355 0.859 0.859 - - - - - CREB3 regulatory factor [Source:MGI Symbol;Acc:MGI:1924378]
38. Gm24545 ENSMUSG00000089276 38 0.859 0.859 - - - - - predicted gene, 24545 [Source:MGI Symbol;Acc:MGI:5454322]
39. 1010001B22Rik ENSMUSG00000097863 67 0.859 0.859 - - - - - RIKEN cDNA 1010001B22 gene [Source:MGI Symbol;Acc:MGI:1922653]
40. Amer2 ENSMUSG00000021986 556 0.859 0.859 - - - - - APC membrane recruitment 2 [Source:MGI Symbol;Acc:MGI:1919375]
41. Disc1 ENSMUSG00000043051 168 0.859 0.859 - - - - - disrupted in schizophrenia 1 [Source:MGI Symbol;Acc:MGI:2447658]
42. Slc4a5 ENSMUSG00000068323 56 0.859 0.859 - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 5 [Source:MGI Symbol;Acc:MGI:2443220]
43. 3110047P20Rik 3110047P20Rik 504 0.859 0.859 - - - - -
44. Pten ENSMUSG00000013663 1937 0.859 0.859 - - - - - phosphatase and tensin homolog [Source:MGI Symbol;Acc:MGI:109583]
45. Acp2 ENSMUSG00000002103 1293 0.858 0.858 - - - - - acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
46. Etfb ENSMUSG00000004610 1827 0.858 0.858 - - - - - electron transferring flavoprotein, beta polypeptide [Source:MGI Symbol;Acc:MGI:106098]
47. Gm21981 ENSMUSG00000079444 45 0.858 0.858 - - - - - predicted gene 21981 [Source:MGI Symbol;Acc:MGI:5439450]
48. Dcun1d2 ENSMUSG00000038506 529 0.858 0.858 - - - - - DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2142792]
49. Vars2 ENSMUSG00000038838 298 0.858 0.858 - - - - - valyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1916165]
50. Pigp ENSMUSG00000022940 3394 0.857 0.857 - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:MGI Symbol;Acc:MGI:1860433]
51. Nfkbiz ENSMUSG00000035356 213 0.857 0.857 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta [Source:MGI Symbol;Acc:MGI:1931595]
52. Kcnd1 ENSMUSG00000009731 279 0.857 0.857 - - - - - potassium voltage-gated channel, Shal-related family, member 1 [Source:MGI Symbol;Acc:MGI:96671]
53. Slc25a35 ENSMUSG00000018740 90 0.856 0.856 - - - - - solute carrier family 25, member 35 [Source:MGI Symbol;Acc:MGI:1919248]
54. Emc8 ENSMUSG00000031819 1988 0.856 0.856 - - - - - ER membrane protein complex subunit 8 [Source:MGI Symbol;Acc:MGI:1343095]
55. Il13ra1 ENSMUSG00000017057 92 0.856 0.856 - - - - - interleukin 13 receptor, alpha 1 [Source:MGI Symbol;Acc:MGI:105052]
56. Gm4117 ENSMUSG00000089940 1066 0.855 0.855 - - - - - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
57. Prkcsh ENSMUSG00000003402 3565 0.855 0.855 - - - - - protein kinase C substrate 80K-H [Source:MGI Symbol;Acc:MGI:107877]
58. Wfs1 ENSMUSG00000039474 322 0.855 0.855 - - - - - wolframin ER transmembrane glycoprotein [Source:MGI Symbol;Acc:MGI:1328355]
59. Rps23-ps Rps23-ps 449 0.855 0.855 - - - - -
60. Mcfd2 ENSMUSG00000024150 1376 0.854 0.854 - - - - - multiple coagulation factor deficiency 2 [Source:MGI Symbol;Acc:MGI:2183439]
61. AI837181 ENSMUSG00000047423 1106 0.854 0.854 - - - - - expressed sequence AI837181 [Source:MGI Symbol;Acc:MGI:2147598]
62. Nr1h5 ENSMUSG00000048938 448 0.853 0.853 - - - - - nuclear receptor subfamily 1, group H, member 5 [Source:MGI Symbol;Acc:MGI:3026618]
63. Abcf2 ENSMUSG00000028953 2070 0.853 0.853 - - - - - ATP-binding cassette, sub-family F (GCN20), member 2 [Source:MGI Symbol;Acc:MGI:1351657]
64. Zfp771 ENSMUSG00000054716 5576 0.853 0.853 - - - - - zinc finger protein 771 [Source:MGI Symbol;Acc:MGI:2442050]
65. St3gal3 ENSMUSG00000028538 520 0.853 0.853 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:1316659]
66. Cdk5rap1 ENSMUSG00000027487 333 0.852 0.852 - - - - - CDK5 regulatory subunit associated protein 1 [Source:MGI Symbol;Acc:MGI:1914221]
67. Tmem68 ENSMUSG00000028232 669 0.852 0.852 - - - - - transmembrane protein 68 [Source:MGI Symbol;Acc:MGI:1919348]
68. Rhoj ENSMUSG00000046768 591 0.852 0.852 - - - - - ras homolog family member J [Source:MGI Symbol;Acc:MGI:1931551]
69. Tecpr2 ENSMUSG00000021275 325 0.852 0.852 - - - - - tectonin beta-propeller repeat containing 2 [Source:MGI Symbol;Acc:MGI:2144865]
70. Lamp3 ENSMUSG00000041247 195 0.852 0.852 - - - - - lysosomal-associated membrane protein 3 [Source:MGI Symbol;Acc:MGI:2441659]
71. Lyst ENSMUSG00000019726 99 0.851 0.851 - - - - - lysosomal trafficking regulator [Source:MGI Symbol;Acc:MGI:107448]
72. Irf2 ENSMUSG00000031627 743 0.85 0.850 - - - - - interferon regulatory factor 2 [Source:MGI Symbol;Acc:MGI:96591]
73. Gys1 ENSMUSG00000003865 589 0.85 0.850 - - - - - glycogen synthase 1, muscle [Source:MGI Symbol;Acc:MGI:101805]
74. Dlst ENSMUSG00000004789 1541 0.849 0.849 - - - - - dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) [Source:MGI Symbol;Acc:MGI:1926170]
75. Med31 ENSMUSG00000020801 458 0.849 0.849 - - - - - mediator complex subunit 31 [Source:MGI Symbol;Acc:MGI:1914529]
76. Rmi1 ENSMUSG00000035367 647 0.849 0.849 - - - - - RecQ mediated genome instability 1 [Source:MGI Symbol;Acc:MGI:1921636]
77. Gm5445 ENSMUSG00000094185 936 0.847 0.847 - - - - - predicted gene 5445 [Source:MGI Symbol;Acc:MGI:3644181]
78. Rab11fip1 ENSMUSG00000031488 364 0.847 0.847 - - - - - RAB11 family interacting protein 1 (class I) [Source:MGI Symbol;Acc:MGI:1923017]
79. Lmbr1 ENSMUSG00000010721 572 0.846 0.846 - - - - - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
80. Crtc1 ENSMUSG00000003575 621 0.845 0.845 - - - - - CREB regulated transcription coactivator 1 [Source:MGI Symbol;Acc:MGI:2142523]
81. Enpp4 ENSMUSG00000023961 501 0.844 0.844 - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:MGI Symbol;Acc:MGI:2682634]
82. Ndufb2 ENSMUSG00000002416 566 0.844 0.844 - - - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:MGI Symbol;Acc:MGI:1915448]
83. Sdccag8 ENSMUSG00000026504 196 0.843 0.843 - - - - - serologically defined colon cancer antigen 8 [Source:MGI Symbol;Acc:MGI:1924066]
84. Fibp ENSMUSG00000024911 1332 0.842 0.842 - - - - - fibroblast growth factor (acidic) intracellular binding protein [Source:MGI Symbol;Acc:MGI:1926233]
85. Rp2h Rp2h 483 0.842 0.842 - - - - -
86. Sh2b3 ENSMUSG00000042594 723 0.841 0.841 - - - - - SH2B adaptor protein 3 [Source:MGI Symbol;Acc:MGI:893598]
87. 2210017G18Rik 2210017G18Rik 582 0.841 0.841 - - - - -
88. Cluap1 ENSMUSG00000014232 483 0.841 0.841 - - - - - clusterin associated protein 1 [Source:MGI Symbol;Acc:MGI:1924029]
89. A630007B06Rik A630007B06Rik 854 0.841 0.841 - - - - -
90. Efr3b ENSMUSG00000020658 852 0.84 0.840 - - - - - EFR3 homolog B [Source:MGI Symbol;Acc:MGI:2444851]
91. Epdr1 ENSMUSG00000002808 561 0.84 0.840 - - - - - ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
92. Arhgap11a ENSMUSG00000041219 1605 0.84 0.840 - - - - - Rho GTPase activating protein 11A [Source:MGI Symbol;Acc:MGI:2444300]
93. Hras ENSMUSG00000025499 4044 0.838 0.838 - - - - - Harvey rat sarcoma virus oncogene [Source:MGI Symbol;Acc:MGI:96224]
94. Trim12c ENSMUSG00000057143 330 0.837 0.837 - - - - - tripartite motif-containing 12C [Source:MGI Symbol;Acc:MGI:4821183]
95. Mcm8 ENSMUSG00000027353 1598 0.837 0.837 - - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
96. Gm26981 ENSMUSG00000098041 717 0.837 0.837 - - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
97. Mrpl10 ENSMUSG00000001445 1186 0.837 0.837 - - - - - mitochondrial ribosomal protein L10 [Source:MGI Symbol;Acc:MGI:1333801]
98. Fam213a ENSMUSG00000021792 505 0.836 0.836 - - - - - family with sequence similarity 213, member A [Source:MGI Symbol;Acc:MGI:1917814]
99. Tmf1 ENSMUSG00000030059 432 0.835 0.835 - - - - - TATA element modulatory factor 1 [Source:MGI Symbol;Acc:MGI:2684999]
100. Zfp809 ENSMUSG00000057982 230 0.835 0.835 - - - - - zinc finger protein 809 [Source:MGI Symbol;Acc:MGI:2143362]

There are 247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA