Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Rab3a

Gene Name Gene ID Reads Annotation
Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]







Genes with expression patterns similar to Rab3a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 6 1.000 1.000 1.000 1.000 1.000 1.000 RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]
2. Lhx3 ENSMUSG00000026934 117 1.641 - - 0.831 - 0.810 - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
3. Uts2b ENSMUSG00000056423 294 1.635 - - 0.860 - 0.775 - urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
4. Ina ENSMUSG00000034336 3835 1.616 - - 0.784 - 0.832 - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
5. Syn1 ENSMUSG00000037217 289 1.611 - - 0.785 - 0.826 - synapsin I [Source:MGI Symbol;Acc:MGI:98460]
6. Mapt ENSMUSG00000018411 1834 1.61 - - 0.751 - 0.859 - microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
7. L1cam ENSMUSG00000031391 813 1.598 - - 0.775 - 0.823 - L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
8. Dusp8 ENSMUSG00000037887 348 1.589 - - 0.802 - 0.787 - dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
9. Nefl ENSMUSG00000022055 4031 1.58 - - 0.706 - 0.874 - neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
10. Cdk5r1 ENSMUSG00000048895 2376 1.576 - - 0.760 - 0.816 - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
11. Slc10a4 ENSMUSG00000029219 550 1.573 - - 0.781 - 0.792 - solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
12. Ube2ql1 ENSMUSG00000052981 312 1.561 - - 0.809 - 0.752 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
13. Actl6b ENSMUSG00000029712 203 1.545 - - 0.715 - 0.830 - actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
14. Myt1l ENSMUSG00000061911 81 1.545 - - 0.756 - 0.789 - myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
15. Mllt11 ENSMUSG00000053192 1776 1.542 - - 0.749 - 0.793 - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
16. Cend1 ENSMUSG00000060240 100 1.53 - - 0.819 - 0.711 - cell cycle exit and neuronal differentiation 1 [Source:MGI Symbol;Acc:MGI:1929898]
17. Kif5a ENSMUSG00000074657 425 1.498 - - 0.774 - 0.724 - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
18. Rufy3 ENSMUSG00000029291 695 1.497 - - 0.756 - 0.741 - RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
19. Sez6 ENSMUSG00000000632 145 1.491 - - 0.778 - - 0.713 seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
20. Nmnat2 ENSMUSG00000042751 205 1.488 - - 0.708 - 0.780 - nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
21. Scg3 ENSMUSG00000032181 445 1.455 - - 0.737 - 0.718 - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
22. Sptbn2 ENSMUSG00000067889 4571 1.434 - - 0.725 - 0.709 - spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
23. Tagln3 ENSMUSG00000022658 6054 1.419 - - 0.703 - 0.716 - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
24. Trim67 ENSMUSG00000036913 70 1.414 - - 0.702 - 0.712 - tripartite motif-containing 67 [Source:MGI Symbol;Acc:MGI:3045323]
25. Rasgef1c ENSMUSG00000020374 48 0.862 - - 0.862 - - - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
26. Snhg11 ENSMUSG00000044349 1353 0.859 - - - - 0.859 - small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
27. Rbfox3 ENSMUSG00000025576 384 0.853 - - 0.853 - - - RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
28. Kcnip2 ENSMUSG00000025221 87 0.851 - - 0.851 - - - Kv channel-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2135916]
29. Scn3a ENSMUSG00000057182 420 0.849 - - - - 0.849 - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
30. Gap43 ENSMUSG00000047261 5946 0.847 - - - - 0.847 - growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
31. Stmn3 ENSMUSG00000027581 1327 0.846 - - - - 0.846 - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
32. Rtn1 ENSMUSG00000021087 2547 0.846 - - - - 0.846 - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
33. Ecel1 ENSMUSG00000026247 83 0.845 - - 0.845 - - - endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
34. Olig2 ENSMUSG00000039830 329 0.843 - - 0.843 - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
35. Fam155a ENSMUSG00000079157 182 0.84 - - - - 0.840 - family with sequence similarity 155, member A [Source:MGI Symbol;Acc:MGI:2142765]
36. Sncg ENSMUSG00000023064 1702 0.838 - - - - 0.838 - synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
37. Gm2990 ENSMUSG00000097794 46 0.832 - - 0.832 - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
38. Cacna1s ENSMUSG00000026407 20 0.829 - - 0.829 - - - calcium channel, voltage-dependent, L type, alpha 1S subunit [Source:MGI Symbol;Acc:MGI:88294]
39. Mnx1 ENSMUSG00000001566 309 0.828 - - 0.828 - - - motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]
40. Lhfpl5 ENSMUSG00000062252 9 0.821 - - 0.821 - - - lipoma HMGIC fusion partner-like 5 [Source:MGI Symbol;Acc:MGI:1915382]
41. Stmn2 ENSMUSG00000027500 6200 0.818 - - - - 0.818 - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
42. Vstm2l ENSMUSG00000037843 86 0.812 - - - - 0.812 - V-set and transmembrane domain containing 2-like [Source:MGI Symbol;Acc:MGI:2685537]
43. A930011O12Rik A930011O12Rik 359 0.812 - - 0.812 - - -
44. Rab6b ENSMUSG00000032549 1005 0.811 - - - - 0.811 - RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
45. Gm3764 ENSMUSG00000097156 474 0.809 - - 0.809 - - - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
46. Mgat5b ENSMUSG00000043857 152 0.805 - - 0.805 - - - mannoside acetylglucosaminyltransferase 5, isoenzyme B [Source:MGI Symbol;Acc:MGI:3606200]
47. Golga7b ENSMUSG00000042532 16 0.805 - - 0.805 - - - golgi autoantigen, golgin subfamily a, 7B [Source:MGI Symbol;Acc:MGI:1918396]
48. Rps6kl1 ENSMUSG00000019235 20 0.804 - - 0.804 - - - ribosomal protein S6 kinase-like 1 [Source:MGI Symbol;Acc:MGI:2443413]
49. Fgfbp3 ENSMUSG00000047632 2036 0.803 - - - - 0.803 - fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
50. Chga ENSMUSG00000021194 199 0.799 - - 0.799 - - - chromogranin A [Source:MGI Symbol;Acc:MGI:88394]
51. Aak1 ENSMUSG00000057230 108 0.798 - - 0.798 - - - AP2 associated kinase 1 [Source:MGI Symbol;Acc:MGI:1098687]
52. Kcnq2 ENSMUSG00000016346 94 0.798 - - 0.798 - - - potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
53. Disp2 ENSMUSG00000040035 230 0.797 - - 0.797 - - - dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
54. Dpp6 ENSMUSG00000061576 128 0.796 - - 0.796 - - - dipeptidylpeptidase 6 [Source:MGI Symbol;Acc:MGI:94921]
55. Dcx ENSMUSG00000031285 1733 0.793 - - - - 0.793 - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
56. Rgs20 ENSMUSG00000002459 23 0.793 - - 0.793 - - - regulator of G-protein signaling 20 [Source:MGI Symbol;Acc:MGI:1929866]
57. Ncan ENSMUSG00000002341 521 0.791 - - 0.791 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
58. Dpysl3 ENSMUSG00000024501 7004 0.79 - - - - 0.790 - dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
59. Nefm ENSMUSG00000022054 2534 0.79 - - - - 0.790 - neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
60. Rab3c ENSMUSG00000021700 370 0.789 - - - - 0.789 - RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
61. Ap3b2 ENSMUSG00000062444 565 0.789 - - - - 0.789 - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
62. Cpne6 ENSMUSG00000022212 33 0.787 - - 0.787 - - - copine VI [Source:MGI Symbol;Acc:MGI:1334445]
63. Olig1 ENSMUSG00000046160 18 0.787 - - 0.787 - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
64. Rhbdl3 ENSMUSG00000017692 783 0.786 - - 0.786 - - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
65. Crmp1 ENSMUSG00000029121 3165 0.783 - - - - 0.783 - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
66. Aplp1 ENSMUSG00000006651 2792 0.782 - - - - 0.782 - amyloid beta (A4) precursor-like protein 1 [Source:MGI Symbol;Acc:MGI:88046]
67. Egfem1 ENSMUSG00000063600 71 0.782 - - 0.782 - - - EGF-like and EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:1922990]
68. Igsf21 ENSMUSG00000040972 143 0.78 - - 0.780 - - - immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]
69. Tmem169 ENSMUSG00000026188 68 0.776 - - 0.776 - - - transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
70. Slc29a4 ENSMUSG00000050822 399 0.772 - - - - 0.772 - solute carrier family 29 (nucleoside transporters), member 4 [Source:MGI Symbol;Acc:MGI:2385330]
71. Ank3 ENSMUSG00000069601 3116 0.77 - - - - 0.770 - ankyrin 3, epithelial [Source:MGI Symbol;Acc:MGI:88026]
72. Hrk ENSMUSG00000046607 35 0.767 - - 0.767 - - - harakiri, BCL2 interacting protein (contains only BH3 domain) [Source:MGI Symbol;Acc:MGI:1201608]
73. 9330159F19Rik ENSMUSG00000004360 464 0.766 - - - - 0.766 - RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
74. Hecw1 ENSMUSG00000021301 236 0.764 - - - - 0.764 - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2444115]
75. St18 ENSMUSG00000033740 408 0.759 - - 0.759 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
76. Cryba1 ENSMUSG00000000724 20 0.757 - - 0.757 - - - crystallin, beta A1 [Source:MGI Symbol;Acc:MGI:88518]
77. Tmem130 ENSMUSG00000043388 34 0.757 - - - - 0.757 - transmembrane protein 130 [Source:MGI Symbol;Acc:MGI:3607706]
78. Nyap2 ENSMUSG00000054976 115 0.754 - - - - 0.754 - neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
79. Lrrtm3 ENSMUSG00000042846 59 0.754 - - 0.754 - - - leucine rich repeat transmembrane neuronal 3 [Source:MGI Symbol;Acc:MGI:2389177]
80. Uchl1 ENSMUSG00000029223 2803 0.754 - - - - 0.754 - ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
81. Tceal7 ENSMUSG00000079428 151 0.751 - - 0.751 - - - transcription elongation factor A (SII)-like 7 [Source:MGI Symbol;Acc:MGI:1915746]
82. Gm16010 ENSMUSG00000085541 23 0.75 - - 0.750 - - - predicted gene 16010 [Source:MGI Symbol;Acc:MGI:3802126]
83. Dnajc6 ENSMUSG00000028528 114 0.749 - - - - 0.749 - DnaJ heat shock protein family (Hsp40) member C6 [Source:MGI Symbol;Acc:MGI:1919935]
84. Cadps ENSMUSG00000054423 870 0.748 - - - - 0.748 - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
85. Sp8 ENSMUSG00000048562 219 0.748 - - - - 0.748 - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
86. Fez1 ENSMUSG00000032118 2537 0.748 - - - - 0.748 - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
87. Dpysl5 ENSMUSG00000029168 2096 0.745 - - - - 0.745 - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
88. Nrcam ENSMUSG00000020598 266 0.745 - - - - 0.745 - neuronal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:104750]
89. Ndrg4 ENSMUSG00000036564 629 0.744 - - - - 0.744 - N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]
90. Gm11703 ENSMUSG00000083394 25 0.743 - - 0.743 - - - predicted gene 11703 [Source:MGI Symbol;Acc:MGI:3649808]
91. Eef1a2 ENSMUSG00000016349 41 0.742 - - - - 0.742 - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
92. Cnih2 ENSMUSG00000024873 3004 0.74 - - - - 0.740 - cornichon family AMPA receptor auxiliary protein 2 [Source:MGI Symbol;Acc:MGI:1277225]
93. Mapk8ip2 ENSMUSG00000022619 910 0.739 - - - - 0.739 - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
94. Snap25 ENSMUSG00000027273 427 0.739 - - - - 0.739 - synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
95. Trim46 ENSMUSG00000042766 393 0.732 - - - - 0.732 - tripartite motif-containing 46 [Source:MGI Symbol;Acc:MGI:2673000]
96. Spock2 ENSMUSG00000058297 1096 0.729 - - - - 0.729 - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
97. Tmem198 ENSMUSG00000051703 118 0.727 - - - - 0.727 - transmembrane protein 198 [Source:MGI Symbol;Acc:MGI:2443133]
98. Elfn1 ENSMUSG00000048988 34 0.727 - - 0.727 - - - leucine rich repeat and fibronectin type III, extracellular 1 [Source:MGI Symbol;Acc:MGI:2442479]
99. Snap91 ENSMUSG00000033419 286 0.727 - - - - 0.727 - synaptosomal-associated protein 91 [Source:MGI Symbol;Acc:MGI:109132]
100. Tnfrsf12a ENSMUSG00000023905 10 0.726 - - 0.726 - - - tumor necrosis factor receptor superfamily, member 12a [Source:MGI Symbol;Acc:MGI:1351484]

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA