Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RXRA

Gene Name Gene ID Reads Annotation
RXRA ENSGALG00000042055 153 retinoid X receptor alpha [Source:HGNC Symbol;Acc:HGNC:10477]











Genes with expression patterns similar to RXRA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RXRA ENSGALG00000042055 153 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinoid X receptor alpha [Source:HGNC Symbol;Acc:HGNC:10477]
2. RUFY4 2 1.483 - - 0.767 - - - - - - 0.716 RUN and FYVE domain containing 4, transcript variant X5
3. IGFBP2 ENSGALG00000011469 26 0.866 - - - - - - - - - 0.866 insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
4. MTM1 ENSGALG00000009096 22 0.82 - - - - - - - - - 0.820 myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
5. PTPRB ENSGALG00000010049 15 0.814 - - - - - - - - - 0.814 protein tyrosine phosphatase, receptor type B [Source:HGNC Symbol;Acc:HGNC:9665]
6. SLC4A10 ENSGALG00000030032 56 0.769 - - - - - - - - - 0.769 solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
7. SHOX2 ENSGALG00000039728 2 0.767 - - 0.767 - - - - - - - short stature homeobox 2 [Source:HGNC Symbol;Acc:HGNC:10854]
8. HBEGF ENSGALG00000000949 15 0.767 - - 0.767 - - - - - - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
9. CTDSP1 ENSGALG00000027768 2 0.767 - - 0.767 - - - - - - - CTD small phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:21614]
10. ANO10 ENSGALG00000042371 2 0.767 - - 0.767 - - - - - - - anoctamin 10 [Source:HGNC Symbol;Acc:HGNC:25519]
11. GFI1 ENSGALG00000043650 2 0.767 - - 0.767 - - - - - - - growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]
12. ENSGALG00000012435 ENSGALG00000012435 3 0.767 - - 0.767 - - - - - - -
13. TDH ENSGALG00000016651 3 0.767 - - 0.767 - - - - - - - L-threonine dehydrogenase (pseudogene)
14. NCF2 ENSGALG00000004700 9 0.767 - - 0.767 - - - - - - - neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]
15. CHIA ENSGALG00000023760 1 0.767 - - 0.767 - - - - - - - chitinase, acidic [Source:NCBI gene;Acc:395072]
16. RCAN2 ENSGALG00000016709 8 0.767 - - 0.767 - - - - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
17. CDC42EP3 ENSGALG00000010551 15 0.767 - - 0.767 - - - - - - - CDC42 effector protein 3 [Source:HGNC Symbol;Acc:HGNC:16943]
18. ENSGALG00000007032 ENSGALG00000007032 1 0.767 - - 0.767 - - - - - - -
19. SNORD47 SNORD47 61 0.767 - - 0.767 - - - - - - -
20. SCUBE3 ENSGALG00000002675 12 0.767 - - 0.767 - - - - - - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
21. BAI2 BAI2 11 0.756 - - 0.756 - - - - - - -
22. ETNK1 ENSGALG00000013205 18 0.751 - - 0.751 - - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
23. PODN ENSGALG00000021869 71 0.74 - - - - - - - - - 0.740 podocan [Source:HGNC Symbol;Acc:HGNC:23174]
24. CLCNKB ENSGALG00000003713 27 0.74 - - 0.740 - - - - - - - chloride voltage-gated channel Kb, transcript variant X3
25. SH3BGR ENSGALG00000016127 2561 0.738 - - - - - - 0.738 - - - SH3 domain binding glutamate rich protein
26. VOPP1 ENSGALG00000042773 771 0.737 - - - - - - - 0.737 - - VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
27. GPR144 GPR144 30 0.737 - - - - - - 0.737 - - -
28. RANBP3L 19 0.73 - - 0.730 - - - - - - - RAN binding protein 3 like, transcript variant X2
29. LSAMP ENSGALG00000040620 2226 0.729 - - - - - - 0.729 - - - limbic system-associated membrane protein [Source:NCBI gene;Acc:395687]
30. BRINP2 ENSGALG00000004448 26 0.724 - - - - - - - - - 0.724 BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
31. CAB39L ENSGALG00000017005 87 0.723 - - - - - - - 0.723 - - calcium binding protein 39 like [Source:NCBI gene;Acc:418865]
32. ENSGALG00000027201 ENSGALG00000027201 12 0.723 - - 0.723 - - - - - - -
33. TBC1D30 ENSGALG00000009859 994 0.721 - - - - - - - 0.721 - - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
34. GGMOXR1 GGMOXR1 6734 0.718 - - - - - - 0.718 - - -
35. SMAD2W ENSGALG00000014184 1773 0.718 - - - - - - - - - 0.718 SMAD family member 2-W, transcript variant X3
36. RBL2 ENSGALG00000003663 10 0.716 - - - - - - - - - 0.716 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
37. NT5E ENSGALG00000015833 5 0.716 - - - - - - - - - 0.716 5'-nucleotidase ecto
38. RAB9B ENSGALG00000004918 2 0.716 - - - - - - - - - 0.716 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
39. LRRN3 ENSGALG00000009488 1 0.716 - - - - - - - - - 0.716 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
40. DAPK1 ENSGALG00000012608 17 0.716 - - - - - - - - - 0.716 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
41. WNT7A ENSGALG00000005123 2 0.716 - - - - - - - - - 0.716 Wnt family member 7A [Source:NCBI gene;Acc:374168]
42. MST MST 9 0.716 - - - - - - - - - 0.716
43. SNORA77 SNORA77 5 0.716 - - - - - - - - - 0.716
44. NUDT3 ENSGALG00000002830 7 0.716 - - - - - - - - - 0.716 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
45. GRAMD2 GRAMD2 3 0.716 - - - - - - - - - 0.716
46. SNX13 ENSGALG00000010840 13 0.716 - - - - - - - - - 0.716 sorting nexin 13 [Source:NCBI gene;Acc:420598]
47. gga-mir-22 ENSGALG00000024507 2 0.716 - - - - - - - - - 0.716 gga-mir-22 [Source:miRBase;Acc:MI0006982]
48. ENSGALG00000026496 ENSGALG00000026496 9 0.716 - - - - - - - - - 0.716
49. IFN-GAMMA IFN-GAMMA 1 0.716 - - - - - - - - - 0.716
50. POLR3G ENSGALG00000014650 7 0.716 - - - - - - - - - 0.716 RNA polymerase III subunit G, transcript variant X2
51. ACOT1L ENSGALG00000008752 6 0.716 - - - - - - - - - 0.716 acyl-CoA thioesterase 1-like
52. RS1 ENSGALG00000016523 11 0.716 - - - - - - - - - 0.716 retinoschisin 1 [Source:NCBI gene;Acc:772315]
53. C8B ENSGALG00000010853 21 0.716 - - - - - - - - - 0.716 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
54. EXOC6B ENSGALG00000016098 3 0.716 - - - - - - - - - 0.716 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
55. CAMTA1 ENSGALG00000039525 1 0.716 - - - - - - - - - 0.716 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
56. TTC29 ENSGALG00000010009 4 0.716 - - - - - - - - - 0.716 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
57. ENSGALG00000009487 ENSGALG00000009487 1 0.716 - - - - - - - - - 0.716
58. ENSGALG00000024286 ENSGALG00000024286 2 0.716 - - - - - - - - - 0.716
59. FOSL2 ENSGALG00000010036 3 0.716 - - - - - - - - - 0.716 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
60. C6orf58 ENSGALG00000045522 2 0.716 - - - - - - - - - 0.716 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
61. ENSGALG00000004619 ENSGALG00000004619 3 0.716 - - - - - - - - - 0.716
62. ESR2 ENSGALG00000011801 7 0.716 - - - - - - - - - 0.716 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
63. TRIM36 ENSGALG00000008188 1 0.716 - - - - - - - - - 0.716 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
64. ENSGALG00000027352 ENSGALG00000027352 69 0.706 - - - - - - 0.706 - - -
65. CDH6 ENSGALG00000012917 17 0.702 - - - - - - - - - 0.702 cadherin 6 [Source:NCBI gene;Acc:414842]
66. HMGCLL1 ENSGALG00000016294 33 0.701 - - - - - - - - - 0.701 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1 [Source:HGNC Symbol;Acc:HGNC:21359]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA