Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RUNX3

Gene Name Gene ID Reads Annotation
RUNX3 ENSGALG00000043372 43 runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]











Genes with expression patterns similar to RUNX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RUNX3 ENSGALG00000043372 43 6 - - 1.000 1.000 1.000 1.000 1.000 1.000 - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
2. UGGT2 ENSGALG00000016893 206 1.616 - - - - - - 0.779 0.837 - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
3. IL2RG ENSGALG00000005638 21 1.442 - - 0.704 - - - - 0.738 - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
4. DCLK3 ENSGALG00000034493 50 1 - - - - - - 1.000 - - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
5. SLC44A3 ENSGALG00000005610 18 1 - - - - - - 1.000 - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
6. MYH7 ENSGALG00000035594 188 1 - - - - - - 1.000 - - - myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
7. MYRF ENSGALG00000041253 13 1 - - - - - - 1.000 - - - myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
8. BTBD3 ENSGALG00000009028 45 1 - - - - - - 1.000 - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
9. PSKH1 5 1 - - - - - - 1.000 - - - protein serine kinase H1, transcript variant X1
10. TMCO4 ENSGALG00000004081 31 1 - - - - - - 1.000 - - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
11. GALNT11 ENSGALG00000006233 210 1 - - - - - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
12. WIPF2 ENSGALG00000037633 178 1 - - - - - - 1.000 - - - WAS/WASL interacting protein family member 2 [Source:HGNC Symbol;Acc:HGNC:30923]
13. OLFML1 ENSGALG00000027184 19 1 - - - - - - 1.000 - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
14. OVST_1 ENSGALG00000011930 9 1 - - - - - - 1.000 - - - ovostatin [Source:NCBI gene;Acc:396151]
15. ENSGALG00000000099 ENSGALG00000000099 16 1 - - - - - - 1.000 - - -
16. LHX4 ENSGALG00000036587 14 1 - - - - - - 1.000 - - - LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
17. NEK8 ENSGALG00000003979 4 1 - - - - - - 1.000 - - - NIMA related kinase 8 [Source:HGNC Symbol;Acc:HGNC:13387]
18. ENSGALG00000026204 ENSGALG00000026204 2 1 - - - - - - 1.000 - - -
19. LOC415324 ENSGALG00000002097 17 1 - - - - - - 1.000 - - - epididymal protein-like, transcript variant X16
20. URB2 ENSGALG00000011101 12 1 - - - - - - 1.000 - - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
21. PIK3C3 ENSGALG00000035773 52 1 - - - - - - 1.000 - - - phosphatidylinositol 3-kinase catalytic subunit type 3 [Source:HGNC Symbol;Acc:HGNC:8974]
22. ENSGALG00000023791 ENSGALG00000023791 3 1 - - - - - - 1.000 - - -
23. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - - 1.000 - - -
24. QRSL1 ENSGALG00000015338 16 1 - - - - - - 1.000 - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
25. ST3GAL2 ENSGALG00000002651 20 1 - - - - - - 1.000 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
26. ENSGALG00000024266 ENSGALG00000024266 5 1 - - - - - - 1.000 - - -
27. OTC ENSGALG00000016254 6 1 - - - - - - 1.000 - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
28. B3GAT1L ENSGALG00000015075 2 1 - - - - - - 1.000 - - - beta-1,3-glucuronyltransferase 1-like [Source:NCBI gene;Acc:408180]
29. ENTPD2 ENSGALG00000039696 3 1 - - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
30. TMEM52B ENSGALG00000034698 169 0.98 - - - - - - 0.980 - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
31. CELF2 ENSGALG00000034590 31 0.964 - - - - - - 0.964 - - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
32. HEP21 ENSGALG00000000115 117 0.958 - - - - - 0.958 - - - - hen egg protein 21 kDa [Source:NCBI gene;Acc:395192]
33. IKBIP ENSGALG00000026284 31 0.954 - - - - - 0.954 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
34. LCT ENSGALG00000012260 21 0.949 - - - - - 0.949 - - - - lactase [Source:NCBI gene;Acc:424294]
35. REM1 ENSGALG00000045602 4 0.949 - - - - - 0.949 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
36. ASB15 ENSGALG00000008814 7 0.949 - - - - - 0.949 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
37. C15orf60 C15orf60 16 0.949 - - - - - 0.949 - - - -
38. TRPV6 ENSGALG00000014746 3 0.949 - - - - - 0.949 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
39. SLC51A ENSGALG00000007478 6 0.949 - - - - - 0.949 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
40. CPSF4L ENSGALG00000004441 4 0.949 - - - - - 0.949 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
41. LOC396365 ENSGALG00000027219 7 0.949 - - - - - 0.949 - - - - preprogastrin
42. HSD11B1b ENSGALG00000001369 1 0.949 - - - - - 0.949 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
43. C1QTNF4 ENSGALG00000008080 3 0.949 - - - - - 0.949 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
44. TMEM56 ENSGALG00000005580 10 0.949 - - - - - 0.949 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
45. ENSGALG00000016499 ENSGALG00000016499 4 0.949 - - - - - 0.949 - - - -
46. CHRNB3 ENSGALG00000015384 9 0.949 - - - - - 0.949 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
47. MRAP2 ENSGALG00000015838 7 0.949 - - - - - 0.949 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
48. ENSGALG00000008309 ENSGALG00000008309 7 0.949 - - - - - 0.949 - - - -
49. CDX1 ENSGALG00000005679 461 0.948 - - - - - - 0.948 - - - caudal type homeobox 1 [Source:NCBI gene;Acc:395397]
50. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.948 - - - - - 0.948 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
51. TGIF2 ENSGALG00000024081 21 0.944 - - - - - 0.944 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
52. LUZP2 ENSGALG00000030151 585 0.939 - - - - - 0.939 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
53. C14orf159 C14orf159 7 0.933 - - - - - 0.933 - - - -
54. IL1RAP ENSGALG00000007253 6 0.931 - - - - - 0.931 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
55. ENSGALG00000010218 ENSGALG00000010218 12 0.931 - - - - - 0.931 - - - -
56. ENSGALG00000027143 ENSGALG00000027143 23 0.929 - - - - - 0.929 - - - -
57. PDSS2 ENSGALG00000015313 280 0.929 - - - - - - 0.929 - - - Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 2 (PDSS2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318441]
58. CD200R1A CD200R1A 105 0.923 - - - - - 0.923 - - - -
59. PPARG ENSGALG00000004974 62 0.92 - - - - - 0.920 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
60. FIBCD1 ENSGALG00000003866 2 0.917 - - - - - 0.917 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
61. NIPAL3 ENSGALG00000004268 37 0.914 - - - - - 0.914 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
62. C20orf96 C20orf96 10 0.912 - - - - - 0.912 - - - -
63. MMP9 ENSGALG00000006992 78 0.909 - - - - 0.909 - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
64. GHR ENSGALG00000014855 131 0.908 - - - - - 0.908 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
65. GPR39 ENSGALG00000012171 420 0.907 - - - - - - 0.907 - - - G protein-coupled receptor 39 [Source:NCBI gene;Acc:424282]
66. gga-mir-147 ENSGALG00000021910 83 0.907 - - - - - 0.907 - - - - gga-mir-147 [Source:miRBase;Acc:MI0003696]
67. SGK196 SGK196 83 0.907 - - - - - 0.907 - - - -
68. PSMD4 ENSGALG00000028505 16 0.905 - - - - - 0.905 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
69. ETAA1 ENSGALG00000027922 1684 0.892 - - - - - 0.892 - - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
70. PHOSPHO1 ENSGALG00000033683 22 0.892 - - - - - - - 0.892 - - phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
71. CCNJL ENSGALG00000040152 4 0.887 - - - - - 0.887 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
72. SEC61A1 ENSGALG00000005966 9 0.885 - - - - - - - 0.885 - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
73. CHIC2 ENSGALG00000013931 21 0.885 - - - - - 0.885 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
74. GAK ENSGALG00000015352 99 0.882 - - - - - - - 0.882 - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
75. SUFU ENSGALG00000008096 307 0.882 - - - - - 0.882 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
76. BDH2 ENSGALG00000012338 2446 0.878 - - - - - 0.878 - - - - 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
77. GALK2 ENSGALG00000036201 1016 0.877 - - - - - 0.877 - - - - galactokinase 2 [Source:NCBI gene;Acc:415596]
78. GPR132 ENSGALG00000027407 9 0.875 - - - - - - 0.875 - - - G protein-coupled receptor 132, transcript variant X2
79. SUSD4 ENSGALG00000009388 48 0.872 - - - - - - 0.872 - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
80. C15orf26 C15orf26 21 0.871 - - - - - 0.871 - - - -
81. MAP3K8 ENSGALG00000007356 188 0.87 - - - - - 0.870 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
82. FASTKD1 ENSGALG00000009841 45 0.869 - - - - - 0.869 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
83. CASP7 ENSGALG00000008933 506 0.866 - - - - - 0.866 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
84. HOXA13 ENSGALG00000027234 3 0.865 - - - - - 0.865 - - - - homeobox A13 [Source:NCBI gene;Acc:373934]
85. FAM65C 36 0.864 - - - - - 0.864 - - - - family with sequence similarity 65 member C, transcript variant X29
86. S100A9 ENSGALG00000024272 103 0.863 - - - - - 0.863 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
87. SCARB1 ENSGALG00000046226 428 0.862 - - - - - 0.862 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
88. PCDH7 ENSGALG00000033883 6 0.861 - - - - - 0.861 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
89. F8 ENSGALG00000005077 56 0.856 - - - - - 0.856 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
90. MTR ENSGALG00000014464 90 0.855 - - - - - - - 0.855 - - 5-methyltetrahydrofolate-homocysteine methyltransferase [Source:NCBI gene;Acc:422069]
91. ARF1 ENSGALG00000005393 364 0.854 - - - - - 0.854 - - - - ADP ribosylation factor 1 [Source:NCBI gene;Acc:420398]
92. SRD5A2 ENSGALG00000010625 23 0.853 - - - - - 0.853 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
93. CA8 ENSGALG00000039145 109 0.85 - - - - - 0.850 - - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
94. MUSTN1 ENSGALG00000001709 713 0.849 - - - - - - - 0.849 - - musculoskeletal, embryonic nuclear protein 1 [Source:NCBI gene;Acc:404773]
95. CACNA2D3 ENSGALG00000005400 66 0.847 - - - - - 0.847 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
96. SPOCK3 ENSGALG00000009568 33 0.843 - - - - - 0.843 - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
97. SELO SELO 711 0.841 - - - - - 0.841 - - - -
98. RFX3 ENSGALG00000010179 305 0.841 - - - - - 0.841 - - - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
99. TDRD1 ENSGALG00000046180 612 0.841 - - - - - 0.841 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
100. PTPRQ ENSGALG00000010935 626 0.834 - - 0.834 - - - - - - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]

There are 127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA