Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RTTN

Gene Name Gene ID Reads Annotation
RTTN ENSGALG00000013745 855 rotatin [Source:NCBI gene;Acc:421023]











Genes with expression patterns similar to RTTN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RTTN ENSGALG00000013745 855 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rotatin [Source:NCBI gene;Acc:421023]
2. TSHZ3 ENSGALG00000004528 3964 0.805 - - - - - - - - 0.805 - teashirt zinc finger homeobox 3 [Source:HGNC Symbol;Acc:HGNC:30700]
3. LOC395159 ENSGALG00000010722 9417 0.801 - - - - - - - 0.801 - - Schwann cell-specific EGF-like repeat autocrine factor
4. ERCC4 ENSGALG00000002981 1178 0.793 - - - - - - - - 0.793 - Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
5. SLC4A4 ENSGALG00000031105 534 0.777 - - - - - - - - 0.777 - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
6. EX-FABP EX-FABP 516 0.772 - - - - - - - - 0.772 -
7. BRD8 ENSGALG00000037646 100 0.771 - - - - - - - - 0.771 - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
8. EIF2AK2 ENSGALG00000010560 749 0.768 - - - - - - - - 0.768 - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
9. SYNC ENSGALG00000003529 389 0.762 - - - - - - - - 0.762 - syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
10. PHLPP1 ENSGALG00000012888 398 0.762 - - - - - - - - 0.762 - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
11. C12orf5 C12orf5 1463 0.755 - - - - - - - - 0.755 -
12. ENSGALG00000005076 ENSGALG00000005076 286 0.754 - - - - - - - - 0.754 -
13. TMEM242 ENSGALG00000013689 377 0.75 - - - - - - - - 0.750 - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
14. MAN1C1 ENSGALG00000001038 1679 0.748 - - - - - - 0.748 - - - mannosidase alpha class 1C member 1 [Source:HGNC Symbol;Acc:HGNC:19080]
15. ENSGALG00000004132 ENSGALG00000004132 9287 0.747 - - - - - - 0.747 - - -
16. REEP5 ENSGALG00000023157 6282 0.739 - - - - - - - 0.739 - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
17. UROD ENSGALG00000010219 5810 0.732 - - - - - - 0.732 - - - uroporphyrinogen decarboxylase, transcript variant X2
18. AAMP ENSGALG00000011445 2528 0.731 - - - - - - - 0.731 - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
19. ARPP21 ENSGALG00000043240 2403 0.731 - - - - - - - 0.731 - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
20. TTBK2 ENSGALG00000009176 196 0.731 - - - - - - - - 0.731 - tau tubulin kinase 2 [Source:HGNC Symbol;Acc:HGNC:19141]
21. ABHD5 503 0.73 - - - - - - - - 0.730 - abhydrolase domain containing 5, transcript variant 2
22. SMN ENSGALG00000002430 7515 0.727 - - - - - - - - 0.727 - survival of motor neuron [Source:NCBI gene;Acc:374025]
23. SEC24C ENSGALG00000005181 11132 0.727 - - - - - - 0.727 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
24. SHOC2 ENSGALG00000008771 2957 0.724 - - - - - - 0.724 - - - SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]
25. KDM1A ENSGALG00000033469 20632 0.721 - - - - - - - 0.721 - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
26. SNORD35 SNORD35 366 0.72 - - - - - - 0.720 - - -
27. CUTC ENSGALG00000037283 2530 0.72 - - - - - - - - 0.720 - cutC copper transporter [Source:NCBI gene;Acc:423829]
28. RNF126 ENSGALG00000042948 4724 0.716 - - - - - - - 0.716 - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
29. SPCS1 ENSGALG00000001655 7718 0.716 - - - - - - - 0.716 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
30. SLC25A36 ENSGALG00000005283 4221 0.715 - - - - - - - - 0.715 - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
31. SLC44A3 ENSGALG00000005610 18 0.714 - - - - 0.714 - - - - - solute carrier family 44 member 3 [Source:HGNC Symbol;Acc:HGNC:28689]
32. NAF1 ENSGALG00000009496 2003 0.713 - - - - - - 0.713 - - - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
33. FK27 ENSGALG00000041771 7 0.711 - - - - 0.711 - - - - - feather keratin 27 [Source:NCBI gene;Acc:101409260]
34. ENSGALG00000021429 ENSGALG00000021429 6 0.711 - - - - 0.711 - - - - -
35. PDCL2 ENSGALG00000013783 9 0.711 - - - - 0.711 - - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
36. ACTR1A ENSGALG00000008086 3145 0.711 - - - - - - 0.711 - - - ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]
37. ADNP2 ENSGALG00000035669 318 0.711 - - - - - - - - 0.711 - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
38. RLF ENSGALG00000000862 586 0.709 - - - - - - - - 0.709 - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
39. TLN2 2295 0.709 - - - - - - 0.709 - - - talin 2, transcript variant X5
40. E2F4 ENSGALG00000001722 2916 0.709 - - - - - - 0.709 - - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
41. DNAJC3 ENSGALG00000016894 9048 0.709 - - - - - - 0.709 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
42. AGRN ENSGALG00000039193 8135 0.708 - - - - - - 0.708 - - - agrin [Source:NCBI gene;Acc:396538]
43. GNG2 ENSGALG00000027629 9404 0.708 - - - - - - 0.708 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
44. AGO1 ENSGALG00000002249 125 0.708 - - - - 0.708 - - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
45. STAM ENSGALG00000035287 7649 0.708 - - - - - - - - 0.708 - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
46. CDH1-A CDH1-A 343 0.707 - - - - - - - - 0.707 -
47. WDFY2 ENSGALG00000017019 2384 0.707 - - - - - - - - 0.707 - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
48. NR2C1 ENSGALG00000011327 5109 0.706 - - - - - - 0.706 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
49. GMPPB ENSGALG00000002500 9454 0.704 - - - - 0.704 - - - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
50. NPHP4 ENSGALG00000000966 1698 0.704 - - - - - - - 0.704 - - nephrocystin 4, transcript variant X5
51. NDUFB3 ENSGALG00000008239 15511 0.703 - - - - - - 0.703 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
52. RHOG ENSGALG00000026995 4875 0.703 - - - - - - 0.703 - - - ras homolog family member G [Source:HGNC Symbol;Acc:HGNC:672]
53. UBE2Q2 3861 0.701 - - - - - - 0.701 - - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
54. AMBRA1 ENSGALG00000008358 2865 0.701 - - - - - - - - 0.701 - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
55. CDC42BPB ENSGALG00000011432 8220 0.701 - - - - - - - 0.701 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA