Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RTN4R

Gene Name Gene ID Reads Annotation
RTN4R ENSGALG00000007732 1515 reticulon 4 receptor











Genes with expression patterns similar to RTN4R

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RTN4R ENSGALG00000007732 1515 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 4 receptor
2. PROM1 ENSGALG00000014496 2494 1.724 - - - - - - 0.733 - - 0.991 prominin 1 [Source:NCBI gene;Acc:422825]
3. WDSUB1 ENSGALG00000012574 2038 1.716 - - - 0.727 - - - - - 0.989 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
4. ARPC1B ENSGALG00000032588 2407 1.695 - - - - - - 0.717 - - 0.978 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
5. DIAPH3 ENSGALG00000016937 1069 1.684 - - - - - 0.703 - - - 0.981 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
6. SMC6 ENSGALG00000016467 3321 1.672 - - - - - - 0.700 - - 0.972 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
7. NAA30 ENSGALG00000012098 4681 1.645 - - - - - 0.738 - - - 0.907 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
8. TCF25 ENSGALG00000000129 7587 1.628 - - - - - 0.753 - - - 0.875 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
9. MYEOV2 MYEOV2 5155 1.589 - - - - - - - 0.708 - 0.881
10. TPM4 ENSGALG00000002563 15621 1.491 - - - 0.722 - - - - - 0.769 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
11. BTG1L ENSGALG00000004676 2293 1.485 - - - 0.722 - - - - - 0.763 protein BTG1-like
12. PREX2 ENSGALG00000042354 134 0.992 - - - - - - - - - 0.992 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
13. TP53BP1 ENSGALG00000042201 708 0.991 - - - - - - - - - 0.991 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
14. 5S_2 5S_2 58 0.99 - - - - - - - - - 0.990
15. CPNE1 ENSGALG00000040856 610 0.99 - - - - - - - - - 0.990 copine 1 [Source:NCBI gene;Acc:419134]
16. FAM190B FAM190B 165 0.99 - - - - - - - - - 0.990
17. IL10R2 IL10R2 72 0.99 - - - - - - - - - 0.990
18. CXADR ENSGALG00000015701 96 0.989 - - - - - - - - - 0.989 coxsackie virus and adenovirus receptor, transcript variant X2
19. C14orf80 C14orf80 1921 0.989 - - - - - - - - - 0.989
20. CPNE2 ENSGALG00000001316 236 0.989 - - - - - - - - - 0.989 copine 2 [Source:NCBI gene;Acc:415646]
21. ZNF6 ZNF6 138 0.989 - - - - - - - - - 0.989
22. SOX6 ENSGALG00000006074 102 0.989 - - - - - - - - - 0.989 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
23. AURKA ENSGALG00000007768 793 0.988 - - - - - - - - - 0.988 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
24. ITSN2 ENSGALG00000016504 651 0.988 - - - - - - - - - 0.988 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
25. PM20D2 ENSGALG00000015779 1301 0.988 - - - - - - - - - 0.988 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
26. ITGA9 ENSGALG00000029378 415 0.988 - - - - - - - - - 0.988 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
27. CRYM ENSGALG00000002484 3558 0.988 - - - - - - - - - 0.988 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
28. APBA3 ENSGALG00000000740 1249 0.987 - - - - - - - - - 0.987 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
29. SSH1 ENSGALG00000004928 222 0.987 - - - - - - - - - 0.987 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
30. C10orf118 C10orf118 762 0.987 - - - - - - - - - 0.987
31. TANGO2 ENSGALG00000002056 1971 0.986 - - - - - - - - - 0.986 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
32. SGSH ENSGALG00000007027 1115 0.986 - - - - - - - - - 0.986 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
33. FASTKD3 ENSGALG00000033521 1186 0.986 - - - - - - - - - 0.986 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
34. NARS ENSGALG00000040506 9506 0.986 - - - - - - - - - 0.986 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
35. MSI1 ENSGALG00000007227 2279 0.985 - - - - - - - - - 0.985 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
36. PDPN ENSGALG00000030096 647 0.985 - - - - - - - - - 0.985 podoplanin, transcript variant X4
37. CASKIN1 604 0.985 - - - - - - - - - 0.985 CASK interacting protein 1, transcript variant X4
38. MTSS1 ENSGALG00000041969 1312 0.985 - - - - - - - - - 0.985 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
39. ARHGAP21 ENSGALG00000007721 3961 0.985 - - - - - - - - - 0.985 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
40. CDH1-A CDH1-A 343 0.984 - - - - - - - - - 0.984
41. PCLO 249 0.984 - - - - - - - - - 0.984 piccolo presynaptic cytomatrix protein
42. HAUS8 ENSGALG00000003727 351 0.984 - - - - - - - - - 0.984 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
43. MPRIP ENSGALG00000004798 6700 0.983 - - - - - - - - - 0.983 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
44. SLC2A3 SLC2A3 527 0.983 - - - - - - - - - 0.983
45. HYAL3 ENSGALG00000029000 712 0.983 - - - - - - - - - 0.983 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
46. INTS10 ENSGALG00000010130 6320 0.983 - - - - - - - - - 0.983 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
47. CNTRL ENSGALG00000001513 1773 0.983 - - - - - - - - - 0.983 centriolin [Source:NCBI gene;Acc:417121]
48. FSTL4 ENSGALG00000031487 529 0.983 - - - - - - - - - 0.983 follistatin like 4 [Source:NCBI gene;Acc:395163]
49. PLA2G15 ENSGALG00000041787 762 0.982 - - - - - - - - - 0.982 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
50. LRRN4 ENSGALG00000008815 481 0.982 - - - - - - - - - 0.982 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
51. GRK4 ENSGALG00000015645 1065 0.982 - - - - - - - - - 0.982 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
52. FRMD3 ENSGALG00000012577 999 0.981 - - - - - - - - - 0.981 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
53. FAM129A ENSGALG00000004812 269 0.981 - - - - - - - - - 0.981 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
54. HEXA ENSGALG00000043828 4789 0.981 - - - - - - - - - 0.981 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
55. BRD1 ENSGALG00000029379 6047 0.981 - - - - - - - - - 0.981 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
56. AGGF1 ENSGALG00000004311 3011 0.979 - - - - - - - - - 0.979 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
57. ENSGALG00000005389 ENSGALG00000005389 553 0.979 - - - - - - - - - 0.979
58. SSR2 ENSGALG00000000764 32190 0.979 - - - - - - - - - 0.979 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
59. TMEM243 ENSGALG00000006633 1592 0.978 - - - - - - - - - 0.978 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
60. SLC39A13 ENSGALG00000008122 2003 0.978 - - - - - - - - - 0.978 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
61. TMEM130 ENSGALG00000003569 949 0.978 - - - - - - - - - 0.978 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
62. TMEM237 ENSGALG00000008381 1317 0.978 - - - - - - - - - 0.978 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
63. SPDL1 ENSGALG00000001942 4403 0.977 - - - - - - - - - 0.977 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
64. PTX3 ENSGALG00000028284 2984 0.977 - - - - - - - - - 0.977 pentraxin 3 [Source:NCBI gene;Acc:548626]
65. MGA 1911 0.977 - - - - - - - - - 0.977 MGA, MAX dimerization protein, transcript variant X15
66. UQCR11 ENSGALG00000001096 25245 0.976 - - - - - - - - - 0.976 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
67. MRPL50 ENSGALG00000015543 11649 0.975 - - - - - - - - - 0.975 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
68. WHSC1 1712 0.975 - - - - - - - - - 0.975 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
69. MYH1D ENSGALG00000027323 365 0.975 - - - - - - - - - 0.975 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
70. MPP5 ENSGALG00000009581 724 0.975 - - - - - - - - - 0.975 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
71. CCT8 ENSGALG00000015821 12161 0.974 - - - - - - - - - 0.974 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
72. TRPC4AP ENSGALG00000003147 3967 0.974 - - - - - - - - - 0.974 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
73. ERI2 1087 0.974 - - - - - - - - - 0.974 ERI1 exoribonuclease family member 2, transcript variant X1
74. GXYLT1 ENSGALG00000009532 5682 0.973 - - - - - - - - - 0.973 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
75. CPT2 ENSGALG00000010681 3211 0.973 - - - - - - - - - 0.973 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
76. PPM1E ENSGALG00000005061 2606 0.972 - - - - - - - - - 0.972 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
77. FBXO21 ENSGALG00000008201 2608 0.972 - - - - - - - - - 0.972 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
78. ACADL ENSGALG00000002891 8058 0.972 - - - - - - - - - 0.972 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
79. C1orf198 ENSGALG00000026600 5651 0.972 - - - - - - - - - 0.972 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
80. ESRRG ENSGALG00000009645 2783 0.972 - - - - - - - - - 0.972 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
81. FREM3 ENSGALG00000020561 1824 0.971 - - - - - - - - - 0.971 FRAS1 related extracellular matrix 3
82. ASAP2 ENSGALG00000016419 1393 0.971 - - - - - - - - - 0.971 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
83. TBC1D19 ENSGALG00000029673 1868 0.971 - - - - - - - - - 0.971 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
84. HOTAIRM1 HOTAIRM1 4335 0.971 - - - - - - - - - 0.971
85. RNF219 ENSGALG00000016911 4458 0.971 - - - - - - - - - 0.971 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
86. RWDD2B ENSGALG00000015807 3601 0.971 - - - - - - - - - 0.971 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
87. ENSGALG00000009044 ENSGALG00000009044 14492 0.97 - - - - - - - - - 0.970
88. FBLIM1 ENSGALG00000003636 1498 0.97 - - - - - - - - - 0.970 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
89. PHF13 ENSGALG00000028148 1240 0.969 - - - - - - - - - 0.969 PHD finger protein 13 [Source:NCBI gene;Acc:101750144]
90. ZNF106 ENSGALG00000009081 1520 0.969 - - - - - - - - - 0.969 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
91. MB21D1 2460 0.969 - - - - - - - - - 0.969 Mab-21 domain containing 1
92. C26H6ORF89 C26H6ORF89 1826 0.969 - - - - - - - - - 0.969
93. ASB3 ENSGALG00000008176 5422 0.969 - - - - - - - - - 0.969 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
94. CCDC88A ENSGALG00000043587 2208 0.969 - - - - - - - - - 0.969 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
95. FBXO25 ENSGALG00000016359 1547 0.969 - - - - - - - - - 0.969 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
96. ZFR ENSGALG00000003235 8466 0.969 - - - - - - - - - 0.969 zinc finger RNA binding protein, transcript variant X3
97. CETN1 ENSGALG00000026741 7243 0.969 - - - - - - - - - 0.969 centrin 1 [Source:NCBI gene;Acc:422668]
98. STX2 ENSGALG00000002536 10438 0.968 - - - - - - - - - 0.968 syntaxin 2 [Source:NCBI gene;Acc:378895]
99. LAMP2 ENSGALG00000008572 198 0.968 - - - - - - - - - 0.968 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
100. FBXO38 ENSGALG00000038627 2658 0.968 - - - - - - - - - 0.968 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]

There are 478 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA