Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RTN4IP1

Gene Name Gene ID Reads Annotation
RTN4IP1 ENSGALG00000015343 4366 reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]











Genes with expression patterns similar to RTN4IP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RTN4IP1 ENSGALG00000015343 4366 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]
2. INTS10 ENSGALG00000010130 6320 1.68 - - - 0.776 - - 0.904 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
3. SLC25A14 ENSGALG00000004063 5574 1.637 - - - 0.762 - - 0.875 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
4. TM9SF3 ENSGALG00000005534 15290 1.63 - - - 0.772 - - 0.858 - - - transmembrane 9 superfamily member 3
5. SCRN1 ENSGALG00000011176 3783 1.607 - - - - - - 0.884 0.723 - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
6. SELK SELK 15022 1.607 - - - 0.750 - - 0.857 - - -
7. CLCN3 ENSGALG00000009674 3704 1.603 - - - - - - 0.900 0.703 - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
8. SSR2 ENSGALG00000000764 32190 1.602 - - - 0.859 - - - 0.743 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
9. MED7 ENSGALG00000003870 4244 1.597 - - - 0.731 - - 0.866 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
10. UTP3 ENSGALG00000011553 8814 1.594 - - - 0.788 - - 0.806 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
11. ACVR2B ENSGALG00000006158 8692 1.58 - - - 0.704 - - 0.876 - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
12. YIPF6 ENSGALG00000035973 3333 1.549 - - - 0.792 - - - 0.757 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
13. TAF9 4097 1.548 - - - 0.815 - - - 0.733 - - TATA-box binding protein associated factor 9
14. RAB20 ENSGALG00000016844 3250 1.537 - - - 0.706 - - 0.831 - - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
15. CACYBP ENSGALG00000004554 7320 1.528 - - - 0.820 - - - 0.708 - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
16. NUP205 ENSGALG00000011662 4157 1.518 - - - 0.784 - - - 0.734 - - nucleoporin 205
17. PRIM2 ENSGALG00000016278 5160 1.483 - - - 0.738 - - - 0.745 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
18. EMC3 ENSGALG00000003738 10363 1.482 - - - 0.747 - - - 0.735 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
19. MSH6 ENSGALG00000008957 6396 1.446 - - - 0.709 - - - 0.737 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
20. DUSP19 ENSGALG00000043268 5543 0.993 - - - - - - 0.993 - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
21. CCNE1 ENSGALG00000004494 4945 0.942 - - - - - - 0.942 - - - cyclin E1 [Source:NCBI gene;Acc:426117]
22. PANX2 ENSGALG00000000003 2185 0.931 - - - - - - 0.931 - - - pannexin 2 [Source:HGNC Symbol;Acc:HGNC:8600]
23. SDCCAG8 ENSGALG00000010713 311 0.926 - - - - - - 0.926 - - - serologically defined colon cancer antigen 8, transcript variant X5
24. BCAS1 ENSGALG00000007796 379 0.925 - - - - - - 0.925 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
25. UBAC1 ENSGALG00000042564 598 0.925 - - - - - - 0.925 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
26. POPDC3 ENSGALG00000027420 700 0.925 - - - - - - 0.925 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
27. MTFMT ENSGALG00000007353 805 0.925 - - - - - - 0.925 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
28. GCC2 ENSGALG00000016806 1085 0.924 - - - - - - 0.924 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
29. KLHL29 ENSGALG00000016495 582 0.924 - - - - - - 0.924 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
30. NPL ENSGALG00000004614 617 0.924 - - - 0.924 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
31. SLC1A1 ENSGALG00000010187 637 0.923 - - - - - - 0.923 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
32. DERL2 ENSGALG00000041844 4509 0.923 - - - - - - 0.923 - - - derlin 2 [Source:HGNC Symbol;Acc:HGNC:17943]
33. CETN2 ENSGALG00000007510 1688 0.923 - - - - - - 0.923 - - - centrin 2 [Source:NCBI gene;Acc:422303]
34. ENSGALG00000002923 ENSGALG00000002923 2233 0.922 - - - - - - 0.922 - - -
35. CAMKK2 ENSGALG00000040131 2795 0.922 - - - - - - 0.922 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
36. ZBTB17 ENSGALG00000035352 280 0.921 - - - 0.921 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
37. MLH3 ENSGALG00000010304 231 0.921 - - - 0.921 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
38. ENSGALG00000027412 ENSGALG00000027412 202 0.92 - - - 0.920 - - - - - -
39. NPHP3 ENSGALG00000034586 1465 0.919 - - - - - - 0.919 - - - nephrocystin 3, transcript variant X1
40. VWDE ENSGALG00000042443 160 0.919 - - - 0.919 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
41. HACE1 ENSGALG00000015415 1194 0.918 - - - - - - 0.918 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
42. KIF6 ENSGALG00000010057 84 0.918 - - - 0.918 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
43. SREBF2 ENSGALG00000041687 4519 0.918 - - - - - - 0.918 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
44. DBN1 ENSGALG00000033405 216 0.917 - - - 0.917 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
45. FRRS1 ENSGALG00000005418 332 0.916 - - - 0.916 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
46. CYP20A1 ENSGALG00000008730 930 0.916 - - - 0.916 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
47. CA3 CA3 200 0.915 - - - 0.915 - - - - - -
48. COPA ENSGALG00000009153 11618 0.915 - - - 0.915 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
49. AKT1 ENSGALG00000011620 4089 0.914 - - - 0.914 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
50. ADCY9 ENSGALG00000007779 766 0.914 - - - 0.914 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
51. TRIM62 ENSGALG00000028437 5124 0.914 - - - 0.914 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
52. LMNB2 ENSGALG00000000470 4364 0.914 - - - - - - 0.914 - - - lamin B2 [Source:NCBI gene;Acc:396222]
53. ATL2 ENSGALG00000037289 7926 0.913 - - - - - - 0.913 - - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
54. MOB1B ENSGALG00000011573 567 0.913 - - - - - - 0.913 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
55. TBK1 ENSGALG00000009840 1650 0.912 - - - 0.912 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
56. SNORA31 SNORA31 183 0.912 - - - 0.912 - - - - - -
57. SHQ1 ENSGALG00000007798 1982 0.911 - - - - - - 0.911 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
58. PNO1 ENSGALG00000009093 11153 0.91 - - - - - - 0.910 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
59. IRAK2 ENSGALG00000008407 5934 0.91 - - - - - - 0.910 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
60. DNAJA3 ENSGALG00000007821 3963 0.91 - - - - - - 0.910 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
61. AKAP7 ENSGALG00000029794 3287 0.909 - - - - - - 0.909 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
62. GUF1 ENSGALG00000014217 211 0.909 - - - 0.909 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
63. ATN1 ENSGALG00000014554 3270 0.909 - - - - - - 0.909 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
64. NDUFB8 ENSGALG00000005704 5781 0.908 - - - - - - 0.908 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
65. BFAR ENSGALG00000003111 1778 0.908 - - - - - - 0.908 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
66. LEPROTL1 ENSGALG00000024482 4251 0.907 - - - - - - 0.907 - - - leptin receptor overlapping transcript-like 1
67. GFPT2 ENSGALG00000039705 562 0.907 - - - 0.907 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
68. NCAM1 ENSGALG00000007839 19929 0.906 - - - - - - 0.906 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
69. MOB2 ENSGALG00000030499 3658 0.905 - - - - - - 0.905 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
70. AK6 ENSGALG00000020534 4791 0.905 - - - - - - 0.905 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
71. PHF14 ENSGALG00000038041 13687 0.905 - - - - - - 0.905 - - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
72. ELMOD1 ENSGALG00000017169 2303 0.905 - - - 0.905 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
73. ARHGAP29 ENSGALG00000005683 3622 0.904 - - - - - - 0.904 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
74. EIF4G3 ENSGALG00000010084 5881 0.903 - - - - - - 0.903 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
75. DISP1 3281 0.903 - - - - - - 0.903 - - - dispatched RND transporter family member 1, transcript variant X3
76. RNPC3 ENSGALG00000005162 269 0.902 - - - 0.902 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
77. RRN3 ENSGALG00000041989 3934 0.902 - - - - - - 0.902 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
78. MAP1LC3A ENSGALG00000038721 2230 0.902 - - - - - - 0.902 - - - microtubule associated protein 1 light chain 3 alpha
79. ENSGALG00000023608 ENSGALG00000023608 1538 0.901 - - - 0.901 - - - - - -
80. KIAA1462 1612 0.9 - - - 0.900 - - - - - - KIAA1462, transcript variant X4
81. KIAA1432 KIAA1432 1792 0.9 - - - 0.900 - - - - - -
82. MSRA ENSGALG00000028032 2607 0.9 - - - - - - 0.900 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
83. ABCD3 ENSGALG00000005647 4844 0.9 - - - - - - 0.900 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
84. gga-mir-6643 ENSGALG00000027935 4442 0.899 - - - - - - 0.899 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
85. IMPACT ENSGALG00000015093 1334 0.899 - - - - - - 0.899 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
86. AP3S1 ENSGALG00000002341 12388 0.898 - - - - - - 0.898 - - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
87. WDR96 WDR96 255 0.898 - - - 0.898 - - - - - -
88. METTL11A METTL11A 11876 0.898 - - - - - - 0.898 - - -
89. MYST2 MYST2 8078 0.896 - - - - - - 0.896 - - -
90. SMN ENSGALG00000002430 7515 0.896 - - - - - - 0.896 - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
91. TBCCD1 ENSGALG00000006566 2696 0.895 - - - - - - 0.895 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
92. MED6 ENSGALG00000029743 9414 0.895 - - - - - - 0.895 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
93. HMHA1 HMHA1 929 0.895 - - - 0.895 - - - - - -
94. PRKD1 ENSGALG00000009900 2094 0.895 - - - 0.895 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
95. NCOA3 ENSGALG00000004570 243 0.895 - - - 0.895 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
96. ASRGL1 ENSGALG00000015949 403 0.894 - - - 0.894 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
97. DEPDC5 ENSGALG00000006766 1592 0.894 - - - 0.894 - - - - - - DEP domain containing 5, transcript variant X6
98. RBBP6 ENSGALG00000006043 9708 0.894 - - - - - - 0.894 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
99. TMEM108 ENSGALG00000036412 2903 0.893 - - - - - - 0.893 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
100. ITGA9 ENSGALG00000029378 415 0.893 - - - 0.893 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]

There are 485 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA