Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RTFDC1

Gene Name Gene ID Reads Annotation
RTFDC1 ENSGALG00000007709 1727 replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]











Genes with expression patterns similar to RTFDC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RTFDC1 ENSGALG00000007709 1727 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
2. CTNS ENSGALG00000004628 1358 0.969 - - 0.969 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
3. SHMT1 ENSGALG00000005046 1430 0.966 - - 0.966 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
4. APTX ENSGALG00000001954 692 0.962 - - 0.962 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
5. UHRF2 ENSGALG00000015052 1268 0.958 - - 0.958 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
6. SOBP ENSGALG00000043047 147 0.956 - - 0.956 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
7. ATP10D ENSGALG00000014192 94 0.949 - - 0.949 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
8. IFT81 ENSGALG00000003854 2534 0.947 - - 0.947 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
9. MTHFSD ENSGALG00000033322 824 0.938 - - 0.938 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
10. AKT3 ENSGALG00000034081 866 0.937 - - 0.937 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
11. SNN ENSGALG00000028876 1687 0.936 - - 0.936 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
12. NGF ENSGALG00000002556 122 0.936 - - 0.936 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
13. PRUNE PRUNE 452 0.933 - - 0.933 - - - - - - -
14. TRIM13 ENSGALG00000017011 92 0.932 - - 0.932 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
15. PCYOX1 ENSGALG00000013878 2200 0.932 - - 0.932 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
16. GTF2H2 ENSGALG00000002399 2361 0.932 - - 0.932 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
17. UEVLD ENSGALG00000006342 164 0.931 - - 0.931 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
18. CLEC16A ENSGALG00000007167 66 0.93 - - 0.930 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
19. F2R ENSGALG00000014983 106 0.93 - - 0.930 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
20. SMOC2 ENSGALG00000011205 340 0.93 - - 0.930 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
21. TUBGCP3 ENSGALG00000016836 332 0.929 - - 0.929 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
22. MRC2 ENSGALG00000000461 48 0.929 - - 0.929 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
23. CDC14B ENSGALG00000012627 110 0.929 - - 0.929 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
24. ENSGALG00000028964 ENSGALG00000028964 46 0.929 - - 0.929 - - - - - - -
25. SZT2 ENSGALG00000028561 255 0.929 - - 0.929 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
26. RQCD1 RQCD1 110 0.929 - - 0.929 - - - - - - -
27. TDRD6 48 0.929 - - 0.929 - - - - - - - tudor domain containing 6
28. ITGB4 ENSGALG00000002389 44 0.929 - - 0.929 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
29. ENSGALG00000004703 ENSGALG00000004703 112 0.929 - - 0.929 - - - - - - -
30. SLC3A1 ENSGALG00000009973 608 0.929 - - 0.929 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
31. TCTN2 ENSGALG00000023683 3596 0.929 - - 0.929 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
32. AKAP10 ENSGALG00000004679 103 0.928 - - 0.928 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
33. OSGIN2 ENSGALG00000042840 83 0.928 - - 0.928 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
34. ENSGALG00000020103 ENSGALG00000020103 64 0.928 - - 0.928 - - - - - - -
35. RRN3 ENSGALG00000041989 3934 0.928 - - 0.928 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
36. PTDSS2 ENSGALG00000004300 682 0.927 - - 0.927 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
37. IFT57 ENSGALG00000015356 5540 0.927 - - 0.927 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
38. RALGDS ENSGALG00000003412 4478 0.927 - - 0.927 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
39. GFER ENSGALG00000005579 1367 0.927 - - 0.927 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
40. BBS5 ENSGALG00000009846 344 0.926 - - 0.926 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
41. ITM2B ENSGALG00000016996 1112 0.926 - - 0.926 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
42. SMARCAD1 ENSGALG00000037339 149 0.925 - - 0.925 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
43. ENSGALG00000002020 ENSGALG00000002020 183 0.925 - - 0.925 - - - - - - -
44. MED12 ENSGALG00000036322 814 0.925 - - 0.925 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
45. DBN1 ENSGALG00000033405 216 0.924 - - 0.924 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
46. FBXL5 ENSGALG00000014510 245 0.924 - - 0.924 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
47. KCTD3 ENSGALG00000009678 335 0.924 - - 0.924 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
48. QSER1 ENSGALG00000012030 4490 0.923 - - 0.923 - - - - - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
49. NXPE3 ENSGALG00000015344 111 0.923 - - 0.923 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
50. U4 U4 69 0.923 - - 0.923 - - - - - - -
51. L3MBTL3 ENSGALG00000034030 113 0.923 - - 0.923 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
52. RPS6KB1 ENSGALG00000005198 169 0.923 - - 0.923 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
53. FAM134C 860 0.923 - - 0.923 - - - - - - - family with sequence similarity 134 member C
54. WHSC1 1712 0.922 - - 0.922 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
55. LRRC42 ENSGALG00000010743 384 0.921 - - 0.921 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
56. ABCC3 ENSGALG00000007522 340 0.921 - - 0.921 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
57. RAD54L2 ENSGALG00000003243 187 0.92 - - 0.920 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
58. ATF7IP ENSGALG00000011814 1571 0.919 - - 0.919 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
59. IQCD ENSGALG00000037307 642 0.919 - - 0.919 - - - - - - - IQ motif containing D, transcript variant X2
60. GDPD4 ENSGALG00000000690 824 0.919 - - 0.919 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
61. DDX6 ENSGALG00000033064 2193 0.919 - - 0.919 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
62. HYAL3 ENSGALG00000029000 712 0.919 - - 0.919 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
63. SLK ENSGALG00000008318 2220 0.919 - - 0.919 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
64. CHAMP1 ENSGALG00000016813 508 0.918 - - 0.918 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
65. ADK ENSGALG00000005057 199 0.918 - - 0.918 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
66. ATP8B4 ENSGALG00000002326 456 0.918 - - 0.918 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
67. STRBP ENSGALG00000029927 3516 0.918 - - 0.918 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
68. VPS13D ENSGALG00000034777 2350 0.918 - - 0.918 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
69. LRRC71 ENSGALG00000027351 695 0.917 - - 0.917 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
70. ABCE1 ENSGALG00000009961 958 0.916 - - 0.916 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
71. MLLT3 ENSGALG00000015078 502 0.916 - - 0.916 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
72. TTPAL ENSGALG00000004244 2734 0.915 - - 0.915 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
73. ARRDC4 ENSGALG00000007012 1039 0.915 - - 0.915 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
74. ZC3H11A ENSGALG00000000541 2712 0.913 - - 0.913 - - - - - - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
75. AASDHPPT ENSGALG00000027981 1017 0.913 - - 0.913 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
76. AMBRA1 ENSGALG00000008358 2865 0.912 - - 0.912 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
77. SGCE ENSGALG00000009670 3070 0.911 - - 0.911 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
78. NACAD 679 0.91 - - 0.910 - - - - - - - NAC alpha domain containing, transcript variant X1
79. WAPAL WAPAL 625 0.91 - - 0.910 - - - - - - -
80. BBX ENSGALG00000015353 1281 0.91 - - 0.910 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
81. GORAB ENSGALG00000003329 1958 0.909 - - 0.909 - - - - - - - golgin, RAB6 interacting [Source:HGNC Symbol;Acc:HGNC:25676]
82. OGFOD2 ENSGALG00000003687 1200 0.909 - - 0.909 - - - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25823]
83. PCYT1B 190 0.908 - - 0.908 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
84. RFK ENSGALG00000033558 1364 0.908 - - 0.908 - - - - - - - riboflavin kinase, transcript variant X3
85. RECQL ENSGALG00000013174 1323 0.907 - - 0.907 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
86. PCDH17 ENSGALG00000016941 1006 0.907 - - 0.907 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
87. CHGA ENSGALG00000010820 1028 0.907 - - 0.907 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
88. SLC37A3 ENSGALG00000012849 836 0.907 - - 0.907 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
89. ACOX1 ENSGALG00000002159 2953 0.906 - - 0.906 - - - - - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
90. ENSGALG00000008689 ENSGALG00000008689 232 0.906 - - 0.906 - - - - - - -
91. SETD1B ENSGALG00000004324 2897 0.905 - - 0.905 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
92. CHD9 ENSGALG00000039178 1168 0.905 - - 0.905 - - - - - - - chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
93. DNAJC24 ENSGALG00000012130 1882 0.905 - - 0.905 - - - - - - - DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
94. NAA30 ENSGALG00000012098 4681 0.904 - - 0.904 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
95. FBN1 ENSGALG00000004960 2130 0.904 - - 0.904 - - - - - - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
96. PIGK ENSGALG00000009015 7942 0.903 - - 0.903 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
97. LARP7 ENSGALG00000012048 8393 0.903 - - 0.903 - - - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
98. GGT7 ENSGALG00000001062 476 0.902 - - 0.902 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
99. PRPF38B ENSGALG00000001972 2009 0.902 - - 0.902 - - - - - - - pre-mRNA processing factor 38B
100. TMEM242 ENSGALG00000013689 377 0.902 - - 0.902 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]

There are 453 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA