Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RTCA

Gene Name Gene ID Reads Annotation
RTCA 1995 RNA 3'-terminal phosphate cyclase











Genes with expression patterns similar to RTCA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RTCA 1995 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA 3'-terminal phosphate cyclase
2. CFAP206 ENSGALG00000015810 16 0.909 - - - - - - - 0.909 - - cilia and flagella associated protein 206, transcript variant X3
3. TBX2 ENSGALG00000034297 57 0.908 - - - - - - - 0.908 - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
4. FBLN7 ENSGALG00000046358 27 0.902 - - - - - - - 0.902 - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
5. FOXP2 ENSGALG00000009424 101 0.9 - - - - - - - 0.900 - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
6. MS4A15 MS4A15 151 0.9 - - - - - - - 0.900 - -
7. LOC422224 ENSGALG00000005964 204 0.895 - - - - - - - 0.895 - - family with sequence similarity 162, member B, transcript variant X2
8. MRAS ENSGALG00000011592 1264 0.891 - - - - - - - 0.891 - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
9. KLF12 ENSGALG00000016926 197 0.89 - - - - - - - 0.890 - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
10. APLNR ENSGALG00000004841 176 0.889 - - - - - - - 0.889 - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
11. ENSGALG00000006389 ENSGALG00000006389 41 0.889 - - - - - - - 0.889 - -
12. A4GNT ENSGALG00000006600 11 0.888 - - - - - - - 0.888 - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
13. SLC16A12 ENSGALG00000006421 4 0.888 - - - - - - - 0.888 - - solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
14. MOGAT1 ENSGALG00000005217 12 0.888 - - - - - - - 0.888 - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
15. ATP8A2 ENSGALG00000017106 31 0.888 - - - - - - - 0.888 - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
16. PLXNB1 23 0.888 - - - - - - - 0.888 - - plexin B1, transcript variant X2
17. HINFP ENSGALG00000006806 15 0.888 - - - - - - - 0.888 - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
18. BPIL ENSGALG00000021025 8 0.888 - - - - - - - 0.888 - - bactericidal permeability-increasing protein-like, transcript variant X2
19. TMEM52B ENSGALG00000034698 169 0.88 - - - - - - - 0.880 - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
20. INHBA ENSGALG00000034616 49 0.879 - - - - - - - 0.879 - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
21. TULP4 ENSGALG00000037377 563 0.878 - - - - - - - 0.878 - - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
22. ATP6AP1L ENSGALG00000015618 476 0.877 - - - - - - - 0.877 - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
23. TMEM117 ENSGALG00000009596 48 0.876 - - - - - - - 0.876 - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
24. NCLN ENSGALG00000013369 37 0.873 - - - - - - - 0.873 - - nicalin [Source:NCBI gene;Acc:426048]
25. HTR1F ENSGALG00000015494 7 0.873 - - - - - - - 0.873 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
26. GYS2 ENSGALG00000013265 14 0.869 - - - - - - - 0.869 - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
27. CCP110 ENSGALG00000006925 59 0.867 - - - - - - - 0.867 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
28. DLG2 56 0.866 - - - - - - - 0.866 - - discs large MAGUK scaffold protein 2, transcript variant X24
29. L3MBTL3 ENSGALG00000034030 113 0.864 - - - - - - - 0.864 - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
30. DNAJB4 ENSGALG00000008916 68 0.864 - - - - - - - 0.864 - - DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]
31. PDE4DIP 277 0.858 - - - - - - - 0.858 - - phosphodiesterase 4D interacting protein
32. C22orf39 ENSGALG00000044654 1364 0.856 - - - - - - - 0.856 - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
33. NADK2 ENSGALG00000003558 79 0.852 - - - - - - - 0.852 - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
34. NKX1-1 ENSGALG00000035650 187 0.85 - - - - - - - 0.850 - - NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
35. DMRTB1 ENSGALG00000029023 35 0.843 - - - - - - - 0.843 - - DMRT like family B with proline rich C-terminal 1 [Source:NCBI gene;Acc:429107]
36. UNC13D ENSGALG00000002234 44 0.839 - - - - - - - 0.839 - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
37. GEN1 ENSGALG00000016468 336 0.838 - - - - - - - 0.838 - - GEN1, Holliday junction 5' flap endonuclease, transcript variant X2
38. SEPP1 SEPP1 35 0.836 - - - - - - - 0.836 - -
39. CD34 ENSGALG00000001177 48 0.833 - - - - - - - 0.833 - - CD34 molecule, transcript variant X3
40. VEPH1 ENSGALG00000009682 51 0.83 - - - - - - - 0.830 - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
41. KPNA5 ENSGALG00000014937 28 0.83 - - - - - - - 0.830 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
42. UNC93B1 ENSGALG00000039347 342 0.83 - - - - - - - 0.830 - - unc-93 homolog B1 (C. elegans), transcript variant X6
43. RIF1 ENSGALG00000012484 2248 0.829 - - - - - - - 0.829 - - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
44. CEP68 ENSGALG00000008787 1591 0.826 - - - - - - - 0.826 - - centrosomal protein 68 [Source:HGNC Symbol;Acc:HGNC:29076]
45. TLR4 ENSGALG00000007001 116 0.823 - - - - - - - 0.823 - - toll like receptor 4 [Source:NCBI gene;Acc:417241]
46. PIFO ENSGALG00000023763 11 0.821 - - - - - - - 0.821 - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
47. TMEM9 ENSGALG00000000226 635 0.82 - - - - - - - 0.820 - - transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
48. PITPNM2 ENSGALG00000003645 17 0.815 - - - - - - - 0.815 - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
49. ENSGALG00000028657 ENSGALG00000028657 1664 0.81 - - - - - - - 0.810 - -
50. PODN ENSGALG00000021869 71 0.808 - - - - - - - 0.808 - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
51. GCH1 ENSGALG00000012200 445 0.802 - - - - - - - 0.802 - - GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
52. SULT1B1 ENSGALG00000023120 523 0.8 - - - - - - - 0.800 - - sulfotransferase family cytosolic 1B member 1 [Source:NCBI gene;Acc:395227]
53. FUCA2 ENSGALG00000013773 67 0.8 - - - - - - - 0.800 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
54. MOB1A ENSGALG00000039203 240 0.799 - - - - - - - 0.799 - - MOB kinase activator 1A [Source:HGNC Symbol;Acc:HGNC:16015]
55. MTFMT ENSGALG00000007353 805 0.799 - - - - - - - 0.799 - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
56. ENSGALG00000026155 ENSGALG00000026155 49 0.798 - - - - - - - 0.798 - -
57. TCERG1 ENSGALG00000007528 6346 0.797 0.797 - - - - - - - - - transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
58. SPINK2 SPINK2 202 0.794 - - - - - - - 0.794 - -
59. FANCD2 ENSGALG00000003720 634 0.791 - - - - - - - 0.791 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
60. IRF10 IRF10 623 0.789 - - - - - - - 0.789 - -
61. NAP1L1 ENSGALG00000010238 14506 0.789 0.789 - - - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
62. SNX20 ENSGALG00000038374 406 0.788 - - - - - - - 0.788 - - sorting nexin 20 [Source:NCBI gene;Acc:415726]
63. ITSN1 ENSGALG00000036677 5727 0.782 - - - - - - - 0.782 - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
64. SHPK ENSGALG00000004637 2386 0.781 - - - - - - - 0.781 - - sedoheptulokinase, transcript variant X1
65. RUNDC1 ENSGALG00000002856 362 0.781 - - - - - - - 0.781 - - Gallus gallus RUN domain containing 1 (RUNDC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328352]
66. MUC5B MUC5B 62 0.779 - - - - - - - - 0.779 -
67. UBE2L6 ENSGALG00000046098 393 0.778 - - - - - - - 0.778 - - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
68. SYCP2 ENSGALG00000045232 91 0.776 - - - - - - - 0.776 - - synaptonemal complex protein 2 [Source:HGNC Symbol;Acc:HGNC:11490]
69. TMEM150C ENSGALG00000011175 218 0.775 - - - - - - - 0.775 - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
70. ATP13A3 ENSGALG00000007075 202 0.774 - - - - - - - 0.774 - - ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]
71. NKIRAS1 ENSGALG00000011289 311 0.773 - - - - - - - 0.773 - - NFKB inhibitor interacting Ras like 1 [Source:HGNC Symbol;Acc:HGNC:17899]
72. AKIRIN2 ENSGALG00000015791 3858 0.77 - - - - - - - 0.770 - - akirin 2 [Source:NCBI gene;Acc:421821]
73. TRIM13 ENSGALG00000017011 92 0.77 - - - - - - - 0.770 - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
74. SLC6A8 ENSGALG00000041419 1621 0.769 - - - - - - - 0.769 - - solute carrier family 6 member 8
75. LSM10 ENSGALG00000002127 2519 0.769 - - - - - - - - 0.769 - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
76. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.767 - - - - - - - 0.767 - - pseudouridylate synthase-like 1, transcript variant X8
77. MPP2 ENSGALG00000035580 383 0.767 - - - - - - - 0.767 - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
78. KAT2B ENSGALG00000011278 529 0.765 - - - - - - - 0.765 - - lysine acetyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:8638]
79. TPRG1L ENSGALG00000001024 9809 0.765 - - 0.765 - - - - - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
80. STEAP3 ENSGALG00000012117 403 0.761 - - - - - - - 0.761 - - STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]
81. ANKRD17 ENSGALG00000011642 3192 0.759 0.759 - - - - - - - - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
82. SRSF11 ENSGALG00000011305 10435 0.759 0.759 - - - - - - - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
83. ASB6 ENSGALG00000004378 1080 0.759 - - - - - - - - 0.759 - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
84. VAV2 ENSGALG00000002699 503 0.758 - - - - - - - 0.758 - - vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
85. ODZ1 ODZ1 124 0.757 - - 0.757 - - - - - - -
86. KLHDC1 ENSGALG00000012241 349 0.757 - - - - - - - - 0.757 - kelch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19836]
87. DIRC2 ENSGALG00000032632 137 0.755 - - - - - - - 0.755 - - disrupted in renal carcinoma 2 [Source:HGNC Symbol;Acc:HGNC:16628]
88. ARHGEF10L ENSGALG00000043128 171 0.753 - - - - - - - 0.753 - - Rho guanine nucleotide exchange factor 10 like [Source:HGNC Symbol;Acc:HGNC:25540]
89. HOMER2 ENSGALG00000006008 973 0.752 - - - - - - - 0.752 - - homer scaffold protein 2 [Source:HGNC Symbol;Acc:HGNC:17513]
90. BNC1 ENSGALG00000006041 63 0.752 - - - - - - - 0.752 - - basonuclin 1 [Source:HGNC Symbol;Acc:HGNC:1081]
91. TOP2A ENSGALG00000003922 7726 0.751 0.751 - - - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
92. BRAT1 ENSGALG00000004348 158 0.75 - - - - - - - 0.750 - - BRCA1 associated ATM activator 1, transcript variant X3
93. FST ENSGALG00000014908 3182 0.75 - - - - - - - 0.750 - - follistatin [Source:NCBI gene;Acc:396119]
94. ATRX ENSGALG00000007843 34172 0.749 0.749 - - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
95. TANK ENSGALG00000011131 3382 0.747 - - 0.747 - - - - - - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
96. KNOP1 ENSGALG00000002042 6251 0.747 0.747 - - - - - - - - - lysine-rich nucleolar protein 1, transcript variant X1
97. PPIG ENSGALG00000009839 24114 0.743 0.743 - - - - - - - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
98. RDX ENSGALG00000017153 6734 0.743 0.743 - - - - - - - - - radixin [Source:NCBI gene;Acc:395511]
99. SURF6 ENSGALG00000038413 11178 0.742 0.742 - - - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
100. USP16 ENSGALG00000015813 6803 0.742 0.742 - - - - - - - - - ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:HGNC:12614]

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA