Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RSL1D1

Gene Name Gene ID Reads Annotation
RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]










Genes with expression patterns similar to RSL1D1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RSL1D1 ENSDARG00000055868, ENSDARG00000115696 3825 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal L1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130603-67]
2. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.266 0.806 0.709 - - - - - - 0.751 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
3. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 2.186 0.739 0.719 - - - 0.728 - - - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
4. eprs ENSDARG00000060494 4729 1.666 - 0.826 - - - - - - 0.840 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
5. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.66 - 0.789 - - - - - - 0.871 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
6. aldh7a1 ENSDARG00000018426 4637 1.631 0.820 0.811 - - - - - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
7. tm2d3 ENSDARG00000076618 2310 1.629 - - - - - - 0.753 - 0.876 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
8. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.628 - 0.842 - - - - - - 0.786 reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
9. cct5 ENSDARG00000045399 11572 1.625 0.895 0.730 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
10. smyd1b ENSDARG00000091253 4964 1.624 0.851 0.773 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
11. plxnb1a ENSDARG00000075821 1702 1.622 0.729 0.893 - - - - - - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
12. eif4e2 ENSDARG00000038585 2116 1.614 0.769 0.845 - - - - - - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
13. mrpl15 ENSDARG00000101306 2796 1.614 - 0.778 - - - - - - 0.836 mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
14. synpo2lb ENSDARG00000078696 2361 1.612 0.750 0.862 - - - - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
15. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.608 - - - - - - - 0.762 0.846 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
16. sps2 1522 1.604 0.742 - - - - - 0.862 - - selenophosphate synthetase 2
17. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.59 0.760 - - - - - - - 0.830 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
18. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.59 - 0.731 - - - - - - 0.859
19. im:7136729 im:7136729 1625 1.584 - - - - - - 0.723 - 0.861
20. atp6v1f ENSDARG00000045543 3445 1.583 - - - - - - 0.729 - 0.854 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
21. mef2cb ENSDARG00000009418 1124 1.582 0.719 - - - - - - - 0.863 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
22. homer3 homer3 1974 1.579 - - - - - - - 0.709 0.870
23. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.578 - 0.720 - - - - - - 0.858 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
24. TMPO TMPO 3264 1.577 0.832 - - - - - - - 0.745
25. ddx21 ENSDARG00000063626 6695 1.574 0.722 - - - - - - - 0.852 DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
26. CABZ01080590.2 CABZ01080590.2 2038 1.57 0.721 0.849 - - - - - - -
27. wasf3 wasf3 3287 1.569 - - - - 0.733 - - - 0.836
28. myod1 ENSDARG00000030110 6019 1.566 0.835 0.731 - - - - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
29. zgc:162967 zgc:162967 2132 1.564 0.709 0.855 - - - - - - -
30. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.563 0.727 0.836 - - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
31. gspt1l ENSDARG00000098627 8381 1.554 - 0.830 - - - - - - 0.724 G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
32. tmpoa ENSDARG00000007315 3638 1.549 - - - - - - 0.701 - 0.848 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
33. KIAA0355 3250 1.547 - 0.793 - - - 0.754 - - - KIAA0355 ortholog, transcript variant X1
34. ahsa1 ahsa1 2012 1.546 0.781 0.765 - - - - - - -
35. plcg1 ENSDARG00000038442 5324 1.543 - 0.822 - - - - - 0.721 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
36. LLPH ENSDARG00000055360 1456 1.536 - 0.831 - - - - - 0.705 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
37. ALDH1L2 ENSDARG00000070230 2550 1.535 0.725 0.810 - - - - - - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
38. AIMP1 ENSDARG00000060036 4136 1.53 0.813 0.717 - - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
39. MRPL21 ENSDARG00000003846 3244 1.526 0.789 - - - - 0.737 - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
40. nop56 ENSDARG00000012820 15231 1.524 0.756 - - - - 0.768 - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
41. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.518 - 0.802 - - - - 0.716 - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
42. chchd1 ENSDARG00000029100 2121 1.517 - 0.769 - - - 0.748 - - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060810-176]
43. gnb4b ENSDARG00000115383 7457 1.514 - 0.750 - - - - 0.764 - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
44. minos1 ENSDARG00000101619 5273 1.513 0.749 0.764 - - - - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
45. h1fx ENSDARG00000054058 4075 1.509 0.720 0.789 - - - - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
46. FHOD3 FHOD3 422 1.506 0.724 0.782 - - - - - - -
47. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.503 0.748 - - - - - - - 0.755 A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
48. lsm14ab ENSDARG00000100553 3837 1.496 - 0.725 - - - - - 0.771 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
49. trdn ENSDARG00000041779 4283 1.495 0.738 0.757 - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
50. CU463857.1 CU463857.1 5541 1.489 0.701 0.788 - - - - - - -
51. rpl7l1 ENSDARG00000042864 3256 1.484 0.780 - - - - - - 0.704 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
52. nrp1a ENSDARG00000102153 4154 1.483 - - - - - 0.714 0.769 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
53. slbp ENSDARG00000100558 3405 1.478 - 0.775 - - 0.703 - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
54. pabpn1 ENSDARG00000045373 4876 1.476 - 0.737 - - - - 0.739 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
55. mrp63 mrp63 2500 1.471 0.768 - - - - 0.703 - - -
56. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.47 - - - - - 0.736 0.734 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
57. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 1.469 - - - - - 0.736 0.733 - - stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
58. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.469 0.718 0.751 - - - - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
59. ube2nb ENSDARG00000045877 4583 1.469 - - - - 0.709 - 0.760 - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
60. cnbpa ENSDARG00000045776 8648 1.468 0.756 - - - - 0.712 - - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
61. ndufb7 ENSDARG00000033789 5898 1.466 - 0.749 - 0.717 - - - - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
62. cdc42ep3 ENSDARG00000052783 1485 1.465 - 0.735 - - - - 0.730 - - CDC42 effector protein (Rho GTPase binding) 3 [Source:ZFIN;Acc:ZDB-GENE-040912-89]
63. NDNF ENSDARG00000062936 7287 1.462 0.755 - - - - - 0.707 - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
64. lpar1 ENSDARG00000099840 2010 1.462 - 0.761 - - - 0.701 - - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
65. nop16 ENSDARG00000044402 3645 1.459 0.707 - - - - - 0.752 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
66. wdfy1 ENSDARG00000005425 3628 1.455 - - - - 0.702 - 0.753 - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
67. pop5 ENSDARG00000053452 1347 1.451 - - - 0.746 - - 0.705 - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
68. zgc:110655 zgc:110655 4237 1.447 0.715 0.732 - - - - - - -
69. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.445 - - - - - - 0.740 0.705 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
70. nnt ENSDARG00000023536 7357 1.443 - 0.721 - - - 0.722 - - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
71. amot ENSDARG00000078335 1757 1.441 - - - - - 0.719 0.722 - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
72. abcf1 ENSDARG00000031795 8635 1.441 0.736 - - - 0.705 - - - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
73. larp1b ENSDARG00000061169 9939 1.436 0.727 0.709 - - - - - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
74. zgc:113054 ENSDARG00000053483 1079 1.424 - 0.705 - - - - 0.719 - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
75. caprin1b ENSDARG00000054272 7033 1.415 - - 0.713 - 0.702 - - - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
76. aes ENSDARG00000021805, ENSDARG00000115836 1533 0.984 - - - - - - - - 0.984 amino-terminal enhancer of split [Source:ZFIN;Acc:ZDB-GENE-040426-1409]
77. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 0.975 - - - - - - - - 0.975 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
78. wipi1 ENSDARG00000040657 2732 0.967 - - - - - - - - 0.967 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
79. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 0.951 - - - - - - - - 0.951 hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
80. dad1 ENSDARG00000102105 14788 0.942 - - - - - - - - 0.942 defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
81. CU915738.1 CU915738.1 3723 0.935 - - - - - - - - 0.935
82. psmc2 ENSDARG00000020101 8095 0.934 - - - - - - - - 0.934 proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
83. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 0.929 - - - - - - - - 0.929 glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
84. si:ch211-85n16.3 ENSDARG00000096346 1095 0.927 - - - - - - - - 0.927 si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
85. C1QBP ENSDARG00000039887 11186 0.919 0.919 - - - - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
86. cdc42ep4b ENSDARG00000045036 1295 0.916 - - - - - - - - 0.916 CDC42 effector protein (Rho GTPase binding) 4b [Source:ZFIN;Acc:ZDB-GENE-091008-2]
87. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 0.916 - - - - - - - - 0.916 peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
88. gpsm1b ENSDARG00000054874 1308 0.915 - - - - - - - - 0.915 G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
89. zgc:56530 zgc:56530 6300 0.915 - - - - - - - - 0.915
90. st13 ENSDARG00000021973 7787 0.914 - - - - - - - - 0.914 ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
91. aip ENSDARG00000104437 3574 0.912 - - - - - - 0.912 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
92. prkca ENSDARG00000039241, ENSDARG00000115657 2136 0.91 - - - - - - - - 0.910 protein kinase C, alpha [Source:ZFIN;Acc:ZDB-GENE-050208-100]
93. grb2b ENSDARG00000038059 9050 0.899 - - - - - - 0.899 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
94. emd ENSDARG00000095774, ENSDARG00000114017 1640 0.891 - - - - - - 0.891 - - emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
95. thrap3b ENSDARG00000098228 4396 0.887 - 0.887 - - - - - - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
96. usp2a ENSDARG00000020107 2586 0.886 0.886 - - - - - - - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
97. gstm gstm 4064 0.886 0.886 - - - - - - - -
98. nars ENSDARG00000061100 2948 0.882 0.882 - - - - - - - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
99. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.881 - - - - - - 0.881 - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
100. calm1b ENSDARG00000034187 13158 0.878 0.878 - - - - - - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]

There are 1143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA