Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RSF1_2

Gene Name Gene ID Reads Annotation
RSF1_2 RSF1_2 1343










Genes with expression patterns similar to RSF1_2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RSF1_2 RSF1_2 1343 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ddx39ab ENSDARG00000015111 11619 2.908 - - 0.744 - - - 0.738 0.701 0.725 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
3. ek1 ENSDARG00000020080 742 2.701 - - 0.974 - - - 0.804 0.923 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
4. sema6a ENSDARG00000102165 1401 2.5 - - 0.957 - - - 0.789 - 0.754 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
5. lhx1a ENSDARG00000014018 958 2.499 - - - - - - 0.809 0.922 0.768 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
6. ARHGAP22 ENSDARG00000076434 1406 2.495 - 0.814 0.964 - - - - - 0.717 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
7. eif4h ENSDARG00000042252 6742 2.492 - - 0.844 - - - - 0.907 0.741 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
8. elovl4a ENSDARG00000006773 412 2.478 - - - - - - 0.804 0.914 0.760 ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
9. pou3f3a ENSDARG00000042032 2835 2.476 - - 0.956 - - - 0.802 - 0.718 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
10. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.417 - - 0.848 - - - 0.821 - 0.748 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
11. tmpob ENSDARG00000022978 8121 2.393 - - - - - - 0.848 0.773 0.772 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
12. zswim5 ENSDARG00000055900 4243 2.39 - - 0.916 - - - 0.766 - 0.708 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
13. drg1 ENSDARG00000039345 7545 2.348 - - 0.813 - - - 0.729 0.806 - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
14. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.337 - - 0.846 - - - 0.755 0.736 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
15. CYTH2 ENSDARG00000028800 2349 2.337 - - - - - - 0.729 0.889 0.719 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
16. arid2 ENSDARG00000007413 4413 2.327 - 0.730 - - - - 0.741 0.856 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
17. TRIM67 ENSDARG00000108787 290 2.326 - 0.769 - - - 0.709 0.848 - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
18. dpysl5a ENSDARG00000011141 1827 2.307 - 0.714 - - - - 0.832 - 0.761 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
19. syncripl ENSDARG00000026723 3889 2.284 - - - 0.779 - 0.774 0.731 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
20. fzd3a ENSDARG00000021664 1958 2.284 - 0.730 - - - - 0.786 - 0.768 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
21. CBFA2T3 ENSDARG00000079012 6799 2.28 - 0.724 - - - - 0.842 0.714 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
22. nr2f2 ENSDARG00000040926 5213 2.276 - 0.734 - - - - 0.714 0.828 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
23. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 2.273 - - - - - - 0.701 0.799 0.773 bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
24. ELOVL4 ELOVL4 3026 2.265 - 0.724 - - - - 0.719 - 0.822
25. gap43 ENSDARG00000099744 4114 2.246 - 0.713 - - - - 0.805 - 0.728 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
26. CLIP3 ENSDARG00000054456 734 2.233 - 0.714 - - - - 0.813 - 0.706 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
27. atp1b2a ENSDARG00000099203 4010 2.232 - 0.707 - - - - 0.764 - 0.761 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
28. cd99l2 ENSDARG00000056722 5036 2.174 - 0.705 - - - - 0.721 0.748 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
29. tial1 ENSDARG00000009525 1856 1.903 - - 0.971 - - - - 0.932 - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
30. phf10 ENSDARG00000070084 1210 1.895 - - 0.973 - - - - 0.922 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
31. tbl3 ENSDARG00000052344 1530 1.876 - - 0.954 - - - - 0.922 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
32. agpat3 ENSDARG00000036549 1093 1.869 - - 0.961 - - - - 0.908 - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
33. kri1 ENSDARG00000075380 1463 1.859 - - 0.964 - - - - 0.895 - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
34. dnajc5aa ENSDARG00000042948 2885 1.835 - - 0.971 - - - 0.864 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
35. prr18 ENSDARG00000093768 409 1.81 - - 0.961 - - - 0.849 - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
36. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.79 - - 0.884 - - - - 0.906 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
37. TUSC3 ENSDARG00000078854 1021 1.785 - - 0.967 - - - 0.818 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
38. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.783 - - 0.963 - - - 0.820 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
39. pacsin1b ENSDARG00000042128 1051 1.783 - - - - - - 0.914 0.869 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
40. hnrnpr ENSDARG00000014569 3423 1.773 - - 0.957 - - - 0.816 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
41. gpm6bb ENSDARG00000001676 2005 1.753 - - 0.919 - - - - 0.834 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
42. atcaya ENSDARG00000071678 344 1.753 - - - - - - 0.830 0.923 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
43. ivns1abpa ENSDARG00000031100 3806 1.752 - - 0.921 - - - - 0.831 - influenza virus NS1A binding protein a [Source:ZFIN;Acc:ZDB-GENE-031222-2]
44. lrrtm1 ENSDARG00000052713 1041 1.731 - - - - - - 0.837 0.894 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
45. xpo1b ENSDARG00000063229 2529 1.731 - - 0.964 - - - - 0.767 - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
46. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.728 - - 0.971 - - - - - 0.757 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
47. notch1a ENSDARG00000103554 498 1.724 - - 0.977 - - 0.747 - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
48. stxbp1a ENSDARG00000001994 5154 1.718 - - 0.943 - - - 0.775 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
49. HDX ENSDARG00000079382 513 1.716 - 0.752 0.964 - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
50. atp6v0a1b ENSDARG00000015174 1052 1.712 - - - - - - 0.834 0.878 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
51. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.711 - - - 0.858 - - - 0.853 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
52. safb ENSDARG00000020467 5608 1.708 - - 0.955 - - - - - 0.753 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
53. clstn1 ENSDARG00000031720 5286 1.706 - - 0.917 - - - 0.789 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
54. CREBZF ENSDARG00000089787 4261 1.704 - - - - - - - 0.949 0.755 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
55. lima1 lima1 4760 1.699 - - 0.931 - - - - 0.768 -
56. hes6 ENSDARG00000019335 4754 1.699 - 0.746 0.953 - - - - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
57. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.699 - - 0.884 - - - - - 0.815 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
58. tmem194b tmem194b 724 1.697 - - 0.966 0.731 - - - - -
59. setdb1b ENSDARG00000099021 2937 1.694 - - 0.961 - - - 0.733 - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
60. dnm1b ENSDARG00000009281 219 1.689 - - - - - 0.843 0.846 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
61. cadpsb ENSDARG00000070567 458 1.685 - - - - - - 0.778 0.907 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
62. zgc:195001 ENSDARG00000070484 3281 1.684 - 0.727 0.957 - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
63. TUBB8P7_1 TUBB8P7_1 2722 1.679 - - 0.958 - - - 0.721 - -
64. rpl7l1 ENSDARG00000042864 3256 1.676 - - 0.931 - - - - - 0.745 ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
65. olfm1b ENSDARG00000014053 1392 1.676 - - - - - - 0.767 0.909 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
66. sipa1l2 ENSDARG00000061640 4545 1.676 - - 0.944 - - - - - 0.732 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
67. MSL1_1 MSL1_1 2365 1.676 - - 0.953 - - - - - 0.723
68. rexo1 ENSDARG00000026986 770 1.675 - - 0.968 - - - - - 0.707 REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
69. SCML2 ENSDARG00000012949 1310 1.673 - - - - - - - 0.854 0.819 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
70. rbm4.1 ENSDARG00000036386 625 1.666 - - - - - - - 0.923 0.743 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
71. rbm25 rbm25 3629 1.665 - - 0.939 - - - - - 0.726
72. xylt1 ENSDARG00000061248 2357 1.661 - - - - - - 0.784 0.877 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
73. yaf2 ENSDARG00000015966 1905 1.66 - - 0.956 - - - - - 0.704 YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
74. CABZ01072954.1 CABZ01072954.1 2330 1.659 - - - - - - 0.764 0.895 -
75. ssbp4 ENSDARG00000056483 10196 1.657 - - 0.923 - - - 0.734 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
76. zic2a ENSDARG00000015554 2860 1.655 - - 0.835 - - - 0.820 - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
77. hoxa3a ENSDARG00000103862 2239 1.653 - - - - - - 0.756 0.897 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
78. arhgap1 ENSDARG00000024324 6904 1.652 - - - - - - - 0.900 0.752 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
79. zgc:174906 ENSDARG00000075314 2187 1.65 - - - - - - 0.771 0.879 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
80. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.639 - - - - - - - 0.932 0.707 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
81. nes ENSDARG00000088805 2710 1.639 - - 0.918 - - - 0.721 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
82. nr2f1a ENSDARG00000052695 5037 1.639 - - 0.892 - - - - - 0.747 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
83. rtf1 ENSDARG00000008947 6596 1.638 - - 0.868 - - - - - 0.770 RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
84. nkx6.2 ENSDARG00000104735 5081 1.638 - - - - - - 0.787 0.851 - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
85. hoxc4a ENSDARG00000070338 1382 1.636 - - - - - - 0.859 0.777 - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
86. shfm1 7620 1.635 - - 0.846 - - - - 0.789 - split hand/foot malformation (ectrodactyly) type 1
87. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.633 - - - - - - 0.800 0.833 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
88. TMEM57 TMEM57 260 1.632 - - - - - - 0.847 - 0.785
89. TNRC6C_2 TNRC6C_2 2444 1.631 - - - - - - 0.751 0.880 -
90. tgif1 ENSDARG00000059337 4020 1.624 - - - - - - 0.720 0.904 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
91. siah1 ENSDARG00000030871 1590 1.621 - - - - - - 0.713 0.908 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
92. mrps7 ENSDARG00000101622 889 1.62 - - - - - 0.753 - 0.867 - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
93. znf292b ENSDARG00000043973 3791 1.616 - - - - - - 0.757 0.859 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
94. ndrg4 ENSDARG00000103937 1234 1.614 - - - - - - 0.865 - 0.749 NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
95. cth ENSDARG00000074301 3860 1.612 - 0.840 - - - - - 0.772 - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
96. C24H17orf96 C24H17orf96 1538 1.61 - - - - - - 0.806 - 0.804
97. meis2b ENSDARG00000077840 5166 1.61 - 0.715 - - - - 0.895 - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
98. asic1a ENSDARG00000008329 347 1.609 - - - - - 0.748 - 0.861 - acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
99. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.607 - - - - - - 0.827 - 0.780 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
100. insm1b ENSDARG00000053301 2032 1.606 - - - - - - - 0.798 0.808 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]

There are 2021 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA