Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RSF1_1

Gene Name Gene ID Reads Annotation
RSF1_1 RSF1_1 62










Genes with expression patterns similar to RSF1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RSF1_1 RSF1_1 62 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000
2. rab4a ENSDARG00000019144 192 1.613 0.771 0.842 - - - - - - - RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
3. si:dkeyp-80c12.4 ENSDARG00000036479 7 1.499 - 0.769 - - 0.730 - - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
4. DOCK4 DOCK4 78 1.497 0.736 0.761 - - - - - - -
5. aatkb ENSDARG00000104442 392 1.496 0.735 0.761 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
6. zgc:91811 zgc:91811 186 1.468 0.724 0.744 - - - - - - -
7. supt3h ENSDARG00000098141 18 1.461 0.700 0.761 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
8. relnl relnl 863 1.46 - 0.723 - 0.737 - - - - -
9. pax7b ENSDARG00000070818 282 1.435 0.720 0.715 - - - - - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
10. BX324131.3 BX324131.3 278 0.952 - 0.952 - - - - - - -
11. grin1a ENSDARG00000027828 1327 0.923 - 0.923 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
12. C11H1orf116 C11H1orf116 9 0.912 - - - 0.912 - - - - -
13. rprma ENSDARG00000053383 12 0.902 - - - 0.902 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate a [Source:ZFIN;Acc:ZDB-GENE-050522-218]
14. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.894 - 0.894 - - - - - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
15. PIGW ENSDARG00000079244 118 0.878 - 0.878 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class W [Source:ZFIN;Acc:ZDB-GENE-080204-94]
16. rexo1 ENSDARG00000026986 770 0.877 0.877 - - - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
17. slc25a3a ENSDARG00000027424 11 0.871 - - - 0.871 - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
18. ikzf1 ENSDARG00000013539 94 0.863 - 0.863 - - - - - - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
19. HIPK1 HIPK1 8 0.857 - - - 0.857 - - - - -
20. si:dkey-6n3.3 si:dkey-6n3.3 9 0.857 - - - 0.857 - - - - -
21. mettl21d mettl21d 94 0.856 0.856 - - - - - - - -
22. msl2a ENSDARG00000038909 1357 0.855 - 0.855 - - - - - - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
23. trim3a ENSDARG00000063711 44 0.849 - - - 0.849 - - - - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
24. smad3b ENSDARG00000010207 951 0.84 - 0.840 - - - - - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
25. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 0.838 - 0.838 - - - - - - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
26. PEG3_12 PEG3_12 128 0.837 - 0.837 - - - - - - -
27. pax6l pax6l 54 0.834 - - - 0.834 - - - - -
28. CABZ01060030.1 ENSDARG00000106579 55 0.83 0.830 - - - - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
29. HAUS2 HAUS2 392 0.83 0.830 - - - - - - - -
30. ZBTB22 ZBTB22 1053 0.828 - 0.828 - - - - - - -
31. rx2 ENSDARG00000040321 112 0.827 - - - 0.827 - - - - - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
32. ZXDC ZXDC 93 0.826 - - - - 0.826 - - - -
33. tbc1d2b ENSDARG00000061986 247 0.826 0.826 - - - - - - - - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
34. TACO1_1 TACO1_1 490 0.809 - 0.809 - - - - - - -
35. fopnl ENSDARG00000071198 1002 0.809 0.809 - - - - - - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
36. GPSM3 GPSM3 257 0.805 - 0.805 - - - - - - -
37. ankmy2a ENSDARG00000005948 141 0.804 - 0.804 - - - - - - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
38. fzd3a ENSDARG00000021664 1958 0.8 - 0.800 - - - - - - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
39. zgc:112294 ENSDARG00000010602 23 0.8 0.800 - - - - - - - - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
40. USP6 USP6 613 0.797 - 0.797 - - - - - - -
41. BX957297.2 ENSDARG00000105608 194 0.797 - 0.797 - - - - - - -
42. CU041386.1 CU041386.1 126 0.797 0.797 - - - - - - - -
43. zgc:174654 zgc:174654 54 0.796 0.796 - - - - - - - -
44. tpd52l1 ENSDARG00000042548 61 0.796 0.796 - - - - - - - - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
45. arhgap4b ENSDARG00000015003 451 0.796 - 0.796 - - - - - - - Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]
46. GRM5_1 GRM5_1 18 0.795 - - - 0.795 - - - - -
47. celf3b ENSDARG00000006983 171 0.794 - - - 0.794 - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
48. CU638740.1_1 CU638740.1_1 387 0.79 - 0.790 - - - - - - -
49. marveld3 ENSDARG00000099654 113 0.789 - 0.789 - - - - - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
50. ddx11 ENSDARG00000011072 325 0.787 - 0.787 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
51. UBASH3B_1 UBASH3B_1 28 0.787 - 0.787 - - - - - - -
52. tfec ENSDARG00000098745 1399 0.785 - - - - 0.785 - - - - transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
53. GPR89A ENSDARG00000077983 463 0.784 0.784 - - - - - - - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
54. rgs20 ENSDARG00000038859 331 0.783 0.783 - - - - - - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
55. HIST1H4J_2 HIST1H4J_2 12 0.783 - - - 0.783 - - - - -
56. ZNF784 ZNF784 51 0.782 - 0.782 - - - - - - -
57. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 0.782 0.782 - - - - - - - -
58. zgc:110130 ENSDARG00000039203 352 0.782 - 0.782 - - - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
59. EXD1 ENSDARG00000098669 27 0.779 - 0.779 - - - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
60. SIPA1 SIPA1 302 0.779 - 0.779 - - - - - - -
61. ATP8B4 ENSDARG00000079453 147 0.779 - 0.779 - - - - - - - ATPase phospholipid transporting 8B4 [Source:ZFIN;Acc:ZDB-GENE-121116-7]
62. pax3b ENSDARG00000028348 388 0.778 - 0.778 - - - - - - - paired box 3b [Source:ZFIN;Acc:ZDB-GENE-080917-53]
63. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 0.777 - - - 0.777 - - - - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
64. mir133a-1 77 0.772 - 0.772 - - - - - - - microRNA 133a-1
65. zgc:92590 ENSDARG00000040282 13 0.772 - - - 0.772 - - - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
66. CABZ01047562.1 CABZ01047562.1 355 0.772 0.772 - - - - - - - -
67. cryaa ENSDARG00000053502, ENSDARG00000113469 80 0.771 - - - 0.771 - - - - - crystallin, alpha A [Source:ZFIN;Acc:ZDB-GENE-020508-1]
68. si:ch211-153l6.4 si:ch211-153l6.4 45 0.769 - 0.769 - - - - - - -
69. foxg1a ENSDARG00000070769 928 0.769 - - - 0.769 - - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
70. RDM1 RDM1 28 0.769 - 0.769 - - - - - - -
71. TFPT ENSDARG00000089572, ENSDARG00000111694 112 0.769 - 0.769 - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
72. si:ch211-258f1.3 ENSDARG00000105119 23 0.769 - 0.769 - - - - - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
73. mvb12ba ENSDARG00000091619 18 0.769 - 0.769 - - - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
74. cnn1a ENSDARG00000017193 6 0.769 - 0.769 - - - - - - - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
75. srd5a1 ENSDARG00000020509 242 0.769 - 0.769 - - - - - - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
76. BX649458.1 BX649458.1 166 0.769 - 0.769 - - - - - - -
77. si:dkey-187a12.4 127 0.769 - 0.769 - - - - - - - si:dkey-187a12.4
78. cyp26b1 ENSDARG00000077121 1364 0.768 - - - 0.768 - - - - - cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
79. cngb3 cngb3 12 0.766 - - - 0.766 - - - - -
80. cdkn2d ENSDARG00000094176 190 0.766 - 0.766 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
81. cnrip1b ENSDARG00000037337 39 0.764 - - - 0.764 - - - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
82. bhlhe22 ENSDARG00000058039 1673 0.763 - 0.763 - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
83. pax6a ENSDARG00000103379 3061 0.762 - 0.762 - - - - - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
84. si:ch211-239j9.1 ENSDARG00000096319 27 0.761 - 0.761 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
85. CR626874.1 ENSDARG00000100141 55 0.761 - 0.761 - - - - - - -
86. traf1 ENSDARG00000069482 50 0.761 - 0.761 - - - - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
87. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.761 - 0.761 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
88. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 0.761 - 0.761 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
89. ODF2 ODF2 6 0.761 - 0.761 - - - - - - -
90. si:ch211-157l15.4 si:ch211-157l15.4 92 0.761 - 0.761 - - - - - - -
91. ITPRIPL2 88 0.761 - 0.761 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
92. TMEM57 TMEM57 260 0.761 - 0.761 - - - - - - -
93. itih6 ENSDARG00000056037 3 0.761 - 0.761 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
94. SNORD30 SNORD30 34 0.761 - 0.761 - - - - - - -
95. CU457778.2 ENSDARG00000109381 2 0.761 - 0.761 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
96. ccr6a ENSDARG00000087474 10 0.761 - 0.761 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
97. BX000703.2 BX000703.2 10 0.761 - 0.761 - - - - - - -
98. fam43b ENSDARG00000070222 92 0.761 - 0.761 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
99. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 0.761 - 0.761 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
100. zgc:153615 ENSDARG00000038981 105 0.761 - 0.761 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]

There are 389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA