Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RSF1

Gene Name Gene ID Reads Annotation
RSF1 ENSGALG00000039068 3438 remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]











Genes with expression patterns similar to RSF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RSF1 ENSGALG00000039068 3438 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 remodeling and spacing factor 1 [Source:HGNC Symbol;Acc:HGNC:18118]
2. KIAA1462 1612 1.526 - - - 0.814 - - - - 0.712 - KIAA1462, transcript variant X4
3. PPFIA1 ENSGALG00000035774 5258 1.513 - - - 0.804 - - - 0.709 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
4. METTL21A ENSGALG00000008493 3188 1.49 - - - 0.786 - - - 0.704 - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
5. ABHD17B ENSGALG00000015139 2805 1.477 - - - 0.754 - - 0.723 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
6. CDC42BPB ENSGALG00000011432 8220 1.458 - - - 0.735 - - - 0.723 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
7. MRPL55 5995 1.445 - - - 0.726 - - - 0.719 - - mitochondrial ribosomal protein L55
8. SRSF11 ENSGALG00000011305 10435 1.422 - - - 0.721 - - - 0.701 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
9. TK2 ENSGALG00000034216 5394 0.856 - - - 0.856 - - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
10. ASRGL1 ENSGALG00000015949 403 0.855 - - - 0.855 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
11. ADCY9 ENSGALG00000007779 766 0.853 - - - 0.853 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
12. VPS13B 2293 0.852 - - - 0.852 - - - - - - vacuolar protein sorting 13 homolog B
13. PRDM4 ENSGALG00000012619 876 0.851 - - - 0.851 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
14. WDR96 WDR96 255 0.85 - - - 0.850 - - - - - -
15. DBN1 ENSGALG00000033405 216 0.849 - - - 0.849 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
16. HINT3 ENSGALG00000044342 5674 0.849 - - - 0.849 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
17. SNORA31 SNORA31 183 0.849 - - - 0.849 - - - - - -
18. DPY30 ENSGALG00000010621 6818 0.848 - - - 0.848 - - - - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
19. ITGA9 ENSGALG00000029378 415 0.848 - - - 0.848 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
20. SLC25A32 ENSGALG00000039882 3100 0.847 - - - 0.847 - - - - - - solute carrier family 25 member 32 [Source:NCBI gene;Acc:428377]
21. MRPS30 ENSGALG00000014874 3416 0.847 - - - 0.847 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
22. TGS1 ENSGALG00000015340 5897 0.846 - - - 0.846 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
23. MLH3 ENSGALG00000010304 231 0.845 - - - 0.845 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
24. CHCHD3 ENSGALG00000006489 18592 0.845 - - - 0.845 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
25. CBX3 ENSGALG00000011038 40977 0.845 - - - 0.845 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
26. ASPH ENSGALG00000030112 1622 0.844 - - - 0.844 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
27. ZBTB17 ENSGALG00000035352 280 0.842 - - - 0.842 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
28. RNPC3 ENSGALG00000005162 269 0.842 - - - 0.842 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
29. TBK1 ENSGALG00000009840 1650 0.84 - - - 0.840 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
30. LRRCC1 ENSGALG00000039499 480 0.84 - - - 0.840 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
31. TRIM62 ENSGALG00000028437 5124 0.838 - - - 0.838 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
32. KIF6 ENSGALG00000010057 84 0.838 - - - 0.838 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
33. ENSGALG00000027412 ENSGALG00000027412 202 0.835 - - - 0.835 - - - - - -
34. GUF1 ENSGALG00000014217 211 0.835 - - - 0.835 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
35. ABCD2 ENSGALG00000042554 1607 0.834 - - - 0.834 - - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
36. TRAPPC12 ENSGALG00000016387 2593 0.834 - - - 0.834 - - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
37. IFT43 ENSGALG00000020415 1218 0.834 - - - 0.834 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
38. NCOA3 ENSGALG00000004570 243 0.834 - - - 0.834 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
39. CA3 CA3 200 0.833 - - - 0.833 - - - - - -
40. KIN ENSGALG00000030702 1608 0.833 - - - 0.833 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
41. SLC27A4 ENSGALG00000004965 3278 0.833 - - - 0.833 - - - - - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
42. NECAB3 ENSGALG00000003065 417 0.832 - - - 0.832 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
43. GFPT2 ENSGALG00000039705 562 0.831 - - - 0.831 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
44. KIAA1432 KIAA1432 1792 0.831 - - - 0.831 - - - - - -
45. MPHOSPH10 ENSGALG00000003906 7029 0.831 - - - 0.831 - - - - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
46. FIGNL1 ENSGALG00000026363 2194 0.831 - - - 0.831 - - - - - - fidgetin like 1, transcript variant X2
47. DEPDC5 ENSGALG00000006766 1592 0.83 - - - 0.830 - - - - - - DEP domain containing 5, transcript variant X6
48. VWDE ENSGALG00000042443 160 0.83 - - - 0.830 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
49. MINA 3053 0.828 - - - 0.828 - - - - - - MYC induced nuclear antigen
50. CANX ENSGALG00000032148 11297 0.827 - - - 0.827 - - - - - - calnexin [Source:NCBI gene;Acc:416288]
51. PHF6 ENSGALG00000006094 1748 0.826 - - - 0.826 - - - - - - PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]
52. DBNDD2 ENSGALG00000003921 8301 0.825 - - - 0.825 - - - - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
53. HMHA1 HMHA1 929 0.825 - - - 0.825 - - - - - -
54. FAM214A ENSGALG00000042839 3378 0.824 - - - 0.824 - - - - - - family with sequence similarity 214 member A [Source:NCBI gene;Acc:415416]
55. BAG5 ENSGALG00000031062 4498 0.822 - - - 0.822 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
56. KCNK5 ENSGALG00000034077 3233 0.82 - - - 0.820 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
57. ITPKB ENSGALG00000009068 324 0.82 - - - 0.820 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
58. PANK1 ENSGALG00000006431 2910 0.82 - - - 0.820 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
59. NUDT4 ENSGALG00000011285 2998 0.819 - - - 0.819 - - - - - - nudix hydrolase 4, transcript variant X5
60. PRKD1 ENSGALG00000009900 2094 0.819 - - - 0.819 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
61. TMEM237 ENSGALG00000008381 1317 0.818 - - - - - - - - 0.818 - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
62. UPF2 ENSGALG00000033772 9548 0.818 - - - - - - - - 0.818 - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
63. CYP20A1 ENSGALG00000008730 930 0.818 - - - 0.818 - - - - - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
64. FRRS1 ENSGALG00000005418 332 0.815 - - - 0.815 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
65. WSB2 ENSGALG00000008151 13246 0.814 - - - - - - - 0.814 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
66. PHTF1 ENSGALG00000001845 3276 0.81 - - - 0.810 - - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
67. PASK ENSGALG00000006016 3096 0.81 - - - 0.810 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
68. ELMOD1 ENSGALG00000017169 2303 0.81 - - - 0.810 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
69. VCP ENSGALG00000001986 23679 0.808 - - - 0.808 - - - - - - valosin containing protein [Source:NCBI gene;Acc:427410]
70. ASCC1 ENSGALG00000026019 3583 0.808 - - - 0.808 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
71. ENTPD4 ENSGALG00000000390 1394 0.807 - - - 0.807 - - - - - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
72. GALNT12 ENSGALG00000013197 1330 0.807 - - - 0.807 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
73. RMI2 ENSGALG00000007155 3508 0.807 - - - 0.807 - - - - - - RecQ mediated genome instability 2 [Source:NCBI gene;Acc:416628]
74. COPA ENSGALG00000009153 11618 0.806 - - - 0.806 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
75. ATG4B ENSGALG00000006298 2288 0.804 - - - 0.804 - - - - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
76. HPS5 ENSGALG00000027716 2466 0.804 - - - 0.804 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
77. CUL3 ENSGALG00000005108 9571 0.803 - - - 0.803 - - - - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
78. MCCC2L ENSGALG00000011255 889 0.802 - - - 0.802 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
79. INTS10 ENSGALG00000010130 6320 0.802 - - - 0.802 - - - - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
80. PHF2 ENSGALG00000039208 2003 0.802 - - - 0.802 - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
81. SLC39A9 ENSGALG00000009438 4838 0.801 - - - 0.801 - - - - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
82. SUMO1 ENSGALG00000008435 19847 0.801 - - - 0.801 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
83. CACYBP ENSGALG00000004554 7320 0.801 - - - 0.801 - - - - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
84. MFSD2A ENSGALG00000003879 5455 0.8 - - - 0.800 - - - - - - major facilitator superfamily domain containing 2A [Source:HGNC Symbol;Acc:HGNC:25897]
85. YIPF5 ENSGALG00000007404 5598 0.8 - - - - - - - 0.800 - - Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]
86. ASB9 ENSGALG00000016563 2780 0.799 - - - 0.799 - - - - - - ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
87. UTP18 ENSGALG00000002985 7129 0.798 - - - 0.798 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
88. HEATR3 ENSGALG00000041613 2704 0.798 - - - 0.798 - - - - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
89. PGD ENSGALG00000002797 15115 0.798 - - - 0.798 - - - - - - phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
90. BTG1L ENSGALG00000004676 2293 0.797 - - - 0.797 - - - - - - protein BTG1-like
91. CNTRL ENSGALG00000001513 1773 0.796 - - - 0.796 - - - - - - centriolin [Source:NCBI gene;Acc:417121]
92. GTF3C4 ENSGALG00000031016 1221 0.796 - - - 0.796 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
93. RBFOX1 ENSGALG00000034325 2133 0.794 - - - 0.794 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
94. ADAR ENSGALG00000021475 6004 0.794 - - - 0.794 - - - - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
95. SESN1 ENSGALG00000015286 2387 0.794 - - - 0.794 - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
96. SCPEP1 ENSGALG00000003185 2322 0.794 - - - 0.794 - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
97. AAMP ENSGALG00000011445 2528 0.793 - - - 0.793 - - - - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
98. NME6 ENSGALG00000038044 1231 0.791 - - - 0.791 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
99. IPO9 ENSGALG00000000397 9263 0.79 - - - 0.790 - - - - - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
100. MOSPD1 ENSGALG00000006132 8503 0.789 - - - 0.789 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]

There are 216 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA