Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RS1

Gene Name Gene ID Reads Annotation
RS1 ENSGALG00000016523 11 retinoschisin 1 [Source:NCBI gene;Acc:772315]











Genes with expression patterns similar to RS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RS1 ENSGALG00000016523 11 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinoschisin 1 [Source:NCBI gene;Acc:772315]
2. HAAO ENSGALG00000009926 6 2 - - 1.000 - - - - 1.000 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
3. PFN4 ENSGALG00000019866 53 1.855 - - - - - - 1.000 0.855 - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
4. ABCA7 ENSGALG00000002453 22 1.758 - - - - - - - 0.907 - 0.851 ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
5. SLC25A29 ENSGALG00000011220 17 1.754 - - - - - 0.866 - - - 0.888 solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
6. SLC27A6 ENSGALG00000000184 98 1.697 - - - - - - - 0.895 - 0.802 solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
7. P2RY13 ENSGALG00000039432 16 1.668 - - - - 0.722 - - - - 0.946 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
8. DUSP11RC1I ENSGALG00000020775 57 1.655 - - - - 0.799 - - 0.856 - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting), transcript variant X12
9. SH2D4B ENSGALG00000002370 10 1.621 - - - 0.712 - - - - - 0.909 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
10. LRTM2 ENSGALG00000026214 160 1.599 - - - - - 0.794 - 0.805 - - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
11. NHS ENSGALG00000016543 11 1.597 - - 0.885 - - - 0.712 - - - NHS actin remodeling regulator [Source:HGNC Symbol;Acc:HGNC:7820]
12. ENSGALG00000014620 ENSGALG00000014620 7 1 - - - - - - 1.000 - - -
13. RUFY4 2 1 - - - - - - - - - 1.000 RUN and FYVE domain containing 4, transcript variant X5
14. C8B ENSGALG00000010853 21 1 - - - - - - - - - 1.000 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
15. ACOT1L ENSGALG00000008752 6 1 - - - - - - - - - 1.000 acyl-CoA thioesterase 1-like
16. ENSGALG00000020842 ENSGALG00000020842 0 1 - - 1.000 - - - - - - -
17. BTRC ENSGALG00000007820 4 1 - - 1.000 - - - - - - - beta-transducin repeat containing E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:1144]
18. LSM14B ENSGALG00000005125 31 1 - - - - - - 1.000 - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
19. RALGPS1_1 ENSGALG00000000906 7 1 - - 1.000 - - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
20. NTRK3 ENSGALG00000040241 3 1 - - 1.000 - - - - - - - neurotrophic receptor tyrosine kinase 3 [Source:NCBI gene;Acc:396081]
21. C1orf112 ENSGALG00000032743 8 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
22. MUSK ENSGALG00000015728 7 1 - - 1.000 - - - - - - - muscle associated receptor tyrosine kinase [Source:NCBI gene;Acc:373897]
23. MMP9 ENSGALG00000006992 78 1 - - - - - - - 1.000 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
24. COL10A1 ENSGALG00000014965 1 1 - - - 1.000 - - - - - - collagen, type X, alpha 1, transcript variant X1
25. C1orf131 C1orf131 141 1 - - - - - - 1.000 - - -
26. TMEM45B ENSGALG00000001203 48 1 - - - - - - 1.000 - - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
27. NPBWR2 ENSGALG00000029170 0 1 - - 1.000 - - - - - - - Gallus gallus neuropeptides B/W receptor 2 (NPBWR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001327794]
28. HDAC3 ENSGALG00000002634 130 1 - - - - - - 1.000 - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
29. CAMTA1 ENSGALG00000039525 1 1 - - - - - - - - - 1.000 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
30. EXOC6B ENSGALG00000016098 3 1 - - - - - - - - - 1.000 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
31. KLHL12 ENSGALG00000000518 5 1 - - - 1.000 - - - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
32. TNFRSF8 ENSGALG00000039741 6 1 - - - - - - - 1.000 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
33. PTHRP PTHRP 8 1 - - - - - - 1.000 - - -
34. MTMR3 ENSGALG00000008051 9 1 - - - - - - 1.000 - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
35. ENSGALG00000002367 ENSGALG00000002367 10 1 - - - 1.000 - - - - - -
36. TTC29 ENSGALG00000010009 4 1 - - - - - - - - - 1.000 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
37. UNC13B ENSGALG00000002165 3 1 - - 1.000 - - - - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
38. GRB10 ENSGALG00000013100 37 1 - - - - - - 1.000 - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
39. CLCA1 ENSGALG00000006322 5 1 - - 1.000 - - - - - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
40. MAPK8IP3 ENSGALG00000029514 57 1 - - - - - - 1.000 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
41. CCDC149 ENSGALG00000014391 13 1 - - 1.000 - - - - - - - coiled-coil domain containing 149 [Source:HGNC Symbol;Acc:HGNC:25405]
42. ONECUT3 ENSGALG00000028081 1 1 - - 1.000 - - - - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
43. ENSGALG00000009487 ENSGALG00000009487 1 1 - - - - - - - - - 1.000
44. CLDN16 ENSGALG00000025821 14 1 - - - - - - - 1.000 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
45. GMNC ENSGALG00000026907 6 1 - - 1.000 - - - - - - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
46. ENSGALG00000005227 ENSGALG00000005227 2 1 - - 1.000 - - - - - - -
47. ANKFY1 ENSGALG00000001467 21 1 - - - - - - 1.000 - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
48. C6orf58 ENSGALG00000045522 2 1 - - - - - - - - - 1.000 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
49. ADORA3 ENSGALG00000001462 1 1 - - - 1.000 - - - - - - adenosine A3 receptor [Source:NCBI gene;Acc:373956]
50. ADGB ENSGALG00000012317 28 1 - - - - - - 1.000 - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
51. CLDN5 ENSGALG00000001621 0 1 - - 1.000 - - - - - - - claudin 5 [Source:NCBI gene;Acc:374028]
52. SLC5A9 ENSGALG00000010494 1 1 - - - 1.000 - - - - - - solute carrier family 5 member 9 [Source:HGNC Symbol;Acc:HGNC:22146]
53. TBX4 ENSGALG00000005285 3 1 - - - 1.000 - - - - - - T-box 4 [Source:NCBI gene;Acc:373989]
54. FOSL2 ENSGALG00000010036 3 1 - - - - - - - - - 1.000 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
55. DLST ENSGALG00000010286 19 1 - - - 1.000 - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
56. ENSGALG00000024286 ENSGALG00000024286 2 1 - - - - - - - - - 1.000
57. CA7 ENSGALG00000033720 1 1 - - - 1.000 - - - - - - carbonic anhydrase 7 [Source:HGNC Symbol;Acc:HGNC:1381]
58. FK21 ENSGALG00000026348 11 1 - - - - - - - 1.000 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
59. DLK1 ENSGALG00000011244 5 1 - - - - - - - 1.000 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
60. IRF8 ENSGALG00000005757 5 1 - - - 1.000 - - - - - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
61. ST8SIA1 ENSGALG00000013211 14 1 - - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
62. ENSGALG00000004619 ENSGALG00000004619 3 1 - - - - - - - - - 1.000
63. TRIM36 ENSGALG00000008188 1 1 - - - - - - - - - 1.000 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
64. EAF1 ENSGALG00000033379 3 1 - - - 1.000 - - - - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
65. ENSGALG00000028102 ENSGALG00000028102 8 1 - - - 1.000 - - - - - -
66. GPR123 GPR123 3 1 - - - 1.000 - - - - - -
67. TNNI3K ENSGALG00000011353 10 1 - - - 1.000 - - - - - - TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
68. AMH ENSGALG00000036346 16 1 - - - 1.000 - - - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
69. ESR2 ENSGALG00000011801 7 1 - - - - - - - - - 1.000 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
70. TEKT5 ENSGALG00000007257 5 1 - - - - - - - 1.000 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
71. SLC4A2 ENSGALG00000034284 3 1 - - - 1.000 - - - - - - solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
72. NT5E ENSGALG00000015833 5 1 - - - - - - - - - 1.000 5'-nucleotidase ecto
73. SLC13A2 ENSGALG00000003647 0 1 - - 1.000 - - - - - - - solute carrier family 13 member 2 [Source:HGNC Symbol;Acc:HGNC:10917]
74. RBL2 ENSGALG00000003663 10 1 - - - - - - - - - 1.000 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
75. CHRNA6 ENSGALG00000015382 31 1 - - - 1.000 - - - - - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
76. CHIC2 ENSGALG00000013931 21 1 - - - - - - 1.000 - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
77. ZEB2 ENSGALG00000040465 315 1 - - - - - - 1.000 - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
78. TNIP3 ENSGALG00000011961 0 1 - - 1.000 - - - - - - - TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]
79. ABI3BP ENSGALG00000015307 4 1 - - - - - - - 1.000 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
80. ENSGALG00000025727 ENSGALG00000025727 26 1 - - - - - - 1.000 - - -
81. TMEM207 ENSGALG00000026953 7 1 - - - - - - - 1.000 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
82. HS6ST2 ENSGALG00000034250 42 1 - - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
83. ENSGALG00000024489 ENSGALG00000024489 1 1 - - - 1.000 - - - - - -
84. LRRN3 ENSGALG00000009488 1 1 - - - - - - - - - 1.000 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
85. DAPK1 ENSGALG00000012608 17 1 - - - - - - - - - 1.000 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
86. RAB9B ENSGALG00000004918 2 1 - - - - - - - - - 1.000 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
87. CNNM2 ENSGALG00000008160 3 1 - - 1.000 - - - - - - - cyclin and CBS domain divalent metal cation transport mediator 2 [Source:HGNC Symbol;Acc:HGNC:103]
88. THSD4 ENSGALG00000004087 12 1 - - - - - 1.000 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
89. C12orf40 5 1 - - 1.000 - - - - - - - chromosome 12 open reading frame 40, transcript variant X6
90. MST MST 9 1 - - - - - - - - - 1.000
91. WNT7A ENSGALG00000005123 2 1 - - - - - - - - - 1.000 Wnt family member 7A [Source:NCBI gene;Acc:374168]
92. C1H7ORF60 C1H7ORF60 3 1 - - 1.000 - - - - - - -
93. AIFM3 ENSGALG00000007720 28 1 - - - - - - 1.000 - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
94. WNT3A ENSGALG00000042657 22 1 - - - - - - 1.000 - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
95. CLDN18 ENSGALG00000006593 77 1 - - - - - - 1.000 - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
96. NUDT3 ENSGALG00000002830 7 1 - - - - - - - - - 1.000 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
97. PEX5L ENSGALG00000043386 5 1 - - - - - - 1.000 - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
98. PEAR1 ENSGALG00000028622 127 1 - - - - - - 1.000 - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
99. SNORA77 SNORA77 5 1 - - - - - - - - - 1.000
100. LOC100858797 ENSGALG00000027167 7 1 - - - - - - 1.000 - - - feather keratin 1-like, transcript variant X1

There are 287 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA