Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRP8

Gene Name Gene ID Reads Annotation
RRP8 109 ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2











Genes with expression patterns similar to RRP8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRP8 109 5 - 1.000 1.000 1.000 - 1.000 - - - 1.000 ribosomal RNA processing 8, methyltransferase, homolog (yeast), transcript variant X2
2. PKP3 ENSGALG00000004260 3 1 - - - - - 1.000 - - - - plakophilin 3 [Source:HGNC Symbol;Acc:HGNC:9025]
3. LRRC19 ENSGALG00000045028 2 1 - - - 1.000 - - - - - - leucine rich repeat containing 19 [Source:HGNC Symbol;Acc:HGNC:23379]
4. OTC ENSGALG00000016254 6 1 - - - - - 1.000 - - - - ornithine carbamoyltransferase [Source:NCBI gene;Acc:395735]
5. LOXL4 ENSGALG00000013090 9 1 - - - - - 1.000 - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
6. FRY ENSGALG00000017075 8 1 - - - - - 1.000 - - - - FRY microtubule binding protein [Source:HGNC Symbol;Acc:HGNC:20367]
7. CD200L ENSGALG00000015395 14 1 - - - - - 1.000 - - - - CD200 molecule-like [Source:NCBI gene;Acc:418424]
8. VSTM2L ENSGALG00000006792 11 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2 like [Source:HGNC Symbol;Acc:HGNC:16096]
9. SGPP2 ENSGALG00000005245 20 1 - - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
10. EPAS1 ENSGALG00000010005 14 1 - - - - - 1.000 - - - - endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
11. TREM-B1 ENSGALG00000003361 8 1 - - - - - 1.000 - - - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
12. CLCNKB ENSGALG00000003713 27 1 - - - - - 1.000 - - - - chloride voltage-gated channel Kb, transcript variant X3
13. SLC26A2 ENSGALG00000001239 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
14. CLDN4 2 1 - - - - - 1.000 - - - - claudin 4
15. TDRD6 48 1 - - - - - 1.000 - - - - tudor domain containing 6
16. SPTSSBL ENSGALG00000026131 70 1 - - - - - 1.000 - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
17. LOC771066 ENSGALG00000026964 1 1 - - - - - 1.000 - - - - claw keratin-like, transcript variant X1
18. C4A ENSGALG00000017040 5 1 - - - - - 1.000 - - - - complement C4A (Rodgers blood group), transcript variant X2
19. ZDHHC18 ENSGALG00000034910 16 1 - - - - - 1.000 - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
20. FAM53B ENSGALG00000009718 1 1 - - - - - 1.000 - - - - family with sequence similarity 53 member B [Source:HGNC Symbol;Acc:HGNC:28968]
21. SGSM1 ENSGALG00000005379 10 1 - - - - - 1.000 - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
22. UGP2 ENSGALG00000008855 20 1 - - - - - 1.000 - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
23. RBP7 ENSGALG00000002637 11 1 - - - - - 1.000 - - - - retinol binding protein 7 [Source:HGNC Symbol;Acc:HGNC:30316]
24. GRIK4 ENSGALG00000006638 22 1 - - - 1.000 - - - - - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
25. SRSF2 ENSGALG00000017357 180 1 - - - - - 1.000 - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
26. C1R ENSGALG00000014659 9 1 - - - - - 1.000 - - - - complement C1r [Source:HGNC Symbol;Acc:HGNC:1246]
27. TBC1D13 ENSGALG00000004645 1 1 - - - - - 1.000 - - - - TBC1 domain family member 13 [Source:HGNC Symbol;Acc:HGNC:25571]
28. IGFBP1 ENSGALG00000043493 68 1 - - - - - 1.000 - - - - insulin like growth factor binding protein 1 [Source:NCBI gene;Acc:408027]
29. ZNF366 ENSGALG00000015008 189 1 - - - - - 1.000 - - - - zinc finger protein 366 [Source:HGNC Symbol;Acc:HGNC:18316]
30. OLAH ENSGALG00000043833 3 1 - - - - - 1.000 - - - - oleoyl-ACP hydrolase [Source:HGNC Symbol;Acc:HGNC:25625]
31. ESPN ENSGALG00000000645 2 1 - - - - - 1.000 - - - - espin [Source:HGNC Symbol;Acc:HGNC:13281]
32. ENSGALG00000004119 ENSGALG00000004119 1 1 - - - - - 1.000 - - - -
33. SULT1C SULT1C 118 1 - - - - - 1.000 - - - -
34. ENSGALG00000022792 ENSGALG00000022792 2 1 - - - - - 1.000 - - - -
35. C3orf58 ENSGALG00000002347 27 1 - - - 1.000 - - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
36. ENSGALG00000025727 ENSGALG00000025727 26 0.992 - - - - - 0.992 - - - -
37. BTLA ENSGALG00000015398 34 0.984 - - - - - 0.984 - - - - B and T lymphocyte associated, transcript variant X1
38. BLB1 ENSGALG00000000141 13 0.982 - - - - - 0.982 - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
39. PCOLCE2 ENSGALG00000002623 8 0.976 - - - - - 0.976 - - - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
40. CKMT1A ENSGALG00000008352 44 0.971 - - - - - 0.971 - - - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
41. PLCD4 ENSGALG00000026687 24 0.968 - - - - - 0.968 - - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
42. SEPN1 SEPN1 58 0.968 - - - - - 0.968 - - - -
43. MUC6 ENSGALG00000040530 11 0.963 - - - - - 0.963 - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
44. ENSGALG00000014539 ENSGALG00000014539 31 0.962 - - - 0.962 - - - - - -
45. KRT20 ENSGALG00000019716 11 0.947 - - - - - 0.947 - - - - keratin 20 [Source:NCBI gene;Acc:420045]
46. PDE8A ENSGALG00000005992 10 0.947 - - - - - 0.947 - - - - phosphodiesterase 8A [Source:HGNC Symbol;Acc:HGNC:8793]
47. ARHGAP20 ENSGALG00000017150 100 0.941 - - - - - 0.941 - - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
48. SNORA31 SNORA31 183 0.931 - - - - - 0.931 - - - -
49. ZNF827 ENSGALG00000009982 7 0.931 - - - - - 0.931 - - - - zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
50. ABCA8 ENSGALG00000021399 11 0.926 - - - - - 0.926 - - - - ATP binding cassette subfamily A member 8
51. TIE1 ENSGALG00000009957 97 0.926 - - - - - 0.926 - - - - tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]
52. ALG12 ENSGALG00000008539 20 0.905 - - - - - 0.905 - - - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
53. FANCF ENSGALG00000003660 25 0.901 - - - - - 0.901 - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
54. CAMK4L ENSGALG00000015203 5 0.897 - - - - - 0.897 - - - - calcium/calmodulin-dependent protein kinase IV-like, transcript variant X3
55. PTPN13 ENSGALG00000011078 62 0.89 - - - - - 0.890 - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
56. CYP4A22 ENSGALG00000020688 741 0.876 - - - - - 0.876 - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
57. MYH7B ENSGALG00000030985 199 0.875 - - - - - 0.875 - - - - Gallus gallus myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA. [Source:RefSeq mRNA;Acc:NM_204587]
58. AK8 ENSGALG00000040923 10 0.875 - - - - - 0.875 - - - - adenylate kinase 8, transcript variant X1
59. TNS3 ENSGALG00000039139 63 0.869 - - - - - 0.869 - - - - tensin 3 [Source:NCBI gene;Acc:420792]
60. LAMA5 486 0.862 - - - - - 0.862 - - - - laminin subunit alpha 5, transcript variant X3
61. PRKCQ ENSGALG00000034970 19 0.858 - - - - - 0.858 - - - - protein kinase C theta [Source:HGNC Symbol;Acc:HGNC:9410]
62. KRT15 ENSGALG00000019718 64 0.846 - - - - - 0.846 - - - - keratin 15 [Source:NCBI gene;Acc:408040]
63. TRPC2L ENSGALG00000017493 28 0.846 - - - - - 0.846 - - - - Putative short transient receptor potential channel 2-like protein
64. AFAP1L2 ENSGALG00000008999 1305 0.844 - - - - - 0.844 - - - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
65. DLEC1 ENSGALG00000005826 23 0.843 - - - - - 0.843 - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
66. CBX4 ENSGALG00000035911 105 0.841 - - - - - 0.841 - - - - chromobox 4 [Source:NCBI gene;Acc:395354]
67. CCP110 ENSGALG00000006925 59 0.836 - - - - - 0.836 - - - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
68. KLF9 ENSGALG00000027374 38 0.832 - - - - - 0.832 - - - - Kruppel like factor 9 [Source:HGNC Symbol;Acc:HGNC:1123]
69. PCDHA11 58 0.825 - - - - - 0.825 - - - - protocadherin alpha 11
70. SYNE3 ENSGALG00000011076 22 0.825 - - - - - 0.825 - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
71. MBIP ENSGALG00000010096 2476 0.825 - - - - - 0.825 - - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
72. WDR17 ENSGALG00000043106 4 0.816 - - - 0.816 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
73. GPR132 ENSGALG00000027407 9 0.816 - - - 0.816 - - - - - - G protein-coupled receptor 132, transcript variant X2
74. FAXC ENSGALG00000015489 0 0.816 - - - 0.816 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
75. TMEM204 ENSGALG00000029047 8 0.816 - - - 0.816 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
76. ENSGALG00000023409 ENSGALG00000023409 0 0.816 - - - 0.816 - - - - - -
77. ENSGALG00000012780 ENSGALG00000012780 10 0.816 - - - 0.816 - - - - - -
78. FAM173B ENSGALG00000013043 4 0.816 - - - 0.816 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
79. BARL ENSGALG00000002170 4 0.816 - - - 0.816 - - - - - - bile acid receptor-like, transcript variant X2
80. CALN1 ENSGALG00000001122 0 0.816 - - - 0.816 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
81. KCNK10 ENSGALG00000010598 7 0.816 - - - 0.816 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
82. SMYD3 ENSGALG00000010653 14 0.816 - - - 0.816 - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
83. CCDC33 7 0.816 - - - 0.816 - - - - - - coiled-coil domain containing 33, transcript variant X2
84. PLEK ENSGALG00000008756 1 0.816 - - - 0.816 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
85. SH3BP5 ENSGALG00000039337 17 0.816 - - - 0.816 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
86. DLX1 ENSGALG00000018439 16 0.816 - - - 0.816 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
87. COL28A1 ENSGALG00000010259 0 0.816 - - - 0.816 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
88. GABRG1 ENSGALG00000020143 5 0.816 - - - 0.816 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
89. IL5RA ENSGALG00000008267 7 0.816 - - - 0.816 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
90. METTL21C ENSGALG00000016864 0 0.816 - - - 0.816 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
91. TRPM8 ENSGALG00000004116 2 0.816 - - - 0.816 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
92. B-G B-G 2 0.816 - - - 0.816 - - - - - -
93. CFH ENSGALG00000002431 31 0.816 - - - 0.816 - - - - - - complement factor H, transcript variant X1
94. LRRC9 2 0.816 - - - 0.816 - - - - - - leucine rich repeat containing 9
95. TPCN2 ENSGALG00000007550 10 0.816 - - - 0.816 - - - - - - two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
96. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 0.816 - - - 0.816 - - - - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
97. KCNJ3 ENSGALG00000012537 6 0.816 - - - 0.816 - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
98. ENSGALG00000028707 ENSGALG00000028707 9 0.816 - - - 0.816 - - - - - -
99. PKHD1 ENSGALG00000042136 8 0.816 - - - 0.816 - - - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
100. ABCA12 ENSGALG00000003553 9 0.816 - - - 0.816 - - - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]

There are 41 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA