Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRP1B

Gene Name Gene ID Reads Annotation
RRP1B ENSGALG00000035696 12309 ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]











Genes with expression patterns similar to RRP1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRP1B ENSGALG00000035696 12309 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
2. KLHL15 ENSGALG00000016345 1638 2.452 - - 0.750 - - - - 0.834 0.868 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
3. CWC27 ENSGALG00000014747 8389 2.314 - - 0.785 - - - 0.723 0.806 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
4. DSCR3 3583 2.284 - - 0.713 - - - 0.785 0.786 - - DSCR3 arrestin fold containing, transcript variant X1
5. TSEN54 3192 2.244 - - - - - - 0.772 0.733 0.739 - tRNA splicing endonuclease subunit 54, transcript variant X2
6. STRN3 ENSGALG00000040464 9045 2.24 - - - - - - 0.715 0.797 0.728 - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
7. CRIPT ENSGALG00000010014 4311 2.237 - - - - - - 0.733 0.755 0.749 - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
8. DNAL4 ENSGALG00000043451 4469 1.687 - - - - - - 0.819 0.868 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
9. FANCL ENSGALG00000030022 7423 1.671 - - - - - - 0.847 0.824 - - FA complementation group L [Source:NCBI gene;Acc:421202]
10. NDUFA12 ENSGALG00000011325 19807 1.665 - - - - - - 0.843 0.822 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
11. MED17 ENSGALG00000017218 5821 1.658 - - - - - - 0.840 - 0.818 - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
12. DAD1 ENSGALG00000035626 32604 1.656 - - - - - - 0.780 0.876 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
13. RIOK2 ENSGALG00000015288 6280 1.641 - - - - - - 0.852 0.789 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
14. MIB1 ENSGALG00000014974 3583 1.639 - - - - - - 0.750 - 0.889 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
15. C11H16ORF80 C11H16ORF80 18673 1.636 - - - - - - 0.810 0.826 - -
16. HOXA5 ENSGALG00000025929 6231 1.626 - - - - - - 0.816 0.810 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
17. PIH1D3 ENSGALG00000004870 1365 1.616 - - 0.747 - - - - - 0.869 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
18. RFC1 ENSGALG00000014298 6516 1.616 - - - - - - 0.803 0.813 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
19. SPDL1 ENSGALG00000001942 4403 1.615 - - - - - - 0.802 0.813 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
20. CCNDBP1 ENSGALG00000004837 11520 1.613 - - - - - - 0.816 0.797 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
21. RUVBL1 ENSGALG00000005931 9379 1.612 - - - - - - 0.837 - 0.775 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
22. CCNC ENSGALG00000015471 6497 1.612 - - - - - - 0.847 0.765 - - cyclin C [Source:NCBI gene;Acc:421791]
23. PCNT ENSGALG00000007021 6428 1.61 - - - - - - 0.832 0.778 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
24. KIF18A ENSGALG00000012160 2612 1.609 - - - - - - 0.772 0.837 - - kinesin family member 18A [Source:NCBI gene;Acc:421607]
25. NUP85 ENSGALG00000007974 21249 1.602 - - - - - - 0.839 0.763 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
26. ATAD5 ENSGALG00000003294 4830 1.602 - - - - - - - 0.754 0.848 - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
27. TBPL1 ENSGALG00000013981 3710 1.6 - - 0.859 - - - - 0.741 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
28. HCCS ENSGALG00000005571 4939 1.6 - - - - - - 0.881 0.719 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
29. MRPL47 ENSGALG00000013759 9044 1.598 - - - - - - 0.832 0.766 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
30. TAF2 ENSGALG00000043193 6311 1.594 - - - - - - 0.771 0.823 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
31. IARS ENSGALG00000004813 12936 1.587 - - - - - - 0.779 0.808 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
32. ARHGAP21 ENSGALG00000007721 3961 1.587 - - - - - - 0.754 0.833 - - Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
33. ZOV3 ZOV3 3267 1.586 - - 0.795 - - - 0.791 - - -
34. WTAP ENSGALG00000011660 10811 1.586 - - - - - - 0.751 - 0.835 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
35. NUP50 ENSGALG00000014222 11743 1.586 - - - - - - 0.863 0.723 - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
36. CCNH ENSGALG00000015641 8051 1.585 - - - - - - 0.860 0.725 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
37. TPRG1L ENSGALG00000001024 9809 1.585 - - - - - - 0.768 - 0.817 - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
38. ADRM1 ENSGALG00000005200 5417 1.584 - - - - - - 0.787 0.797 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
39. SPCS1 ENSGALG00000001655 7718 1.575 - - - - - - 0.747 0.828 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
40. SEC22A ENSGALG00000011697 7981 1.573 - - - - - - 0.742 0.831 - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
41. CLN8 ENSGALG00000039606 4209 1.573 - - 0.794 - - - 0.779 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
42. DYNC1I2 ENSGALG00000009551 5420 1.573 - - 0.812 - - - 0.761 - - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
43. TRAPPC6B ENSGALG00000010157 7567 1.573 - - - - - - 0.793 0.780 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
44. RUFY2 1442 1.572 - - 0.715 - - - - - 0.857 - RUN and FYVE domain containing 2, transcript variant X1
45. WDR3 ENSGALG00000014791 5856 1.571 - - - - - - 0.732 0.839 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
46. BORA ENSGALG00000016931 3660 1.57 - - - - - - 0.760 0.810 - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
47. GPR161 ENSGALG00000015247 3473 1.57 - - - - - - 0.771 0.799 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
48. MRPL2 ENSGALG00000008597 16500 1.567 - - - - - - 0.809 0.758 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
49. R3HDM1 ENSGALG00000012246 6580 1.566 - - - - - - 0.856 0.710 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
50. EXOSC9 ENSGALG00000011884 3403 1.563 - - - - - - 0.762 0.801 - - exosome component 9 [Source:NCBI gene;Acc:619530]
51. NAA20 ENSGALG00000012587 11349 1.562 - - - - - - 0.813 - 0.749 - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
52. DNAJA4 ENSGALG00000036850 6847 1.554 - - - - - - 0.764 0.790 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
53. SDF2L1 ENSGALG00000031982 6084 1.554 - - - - - - 0.749 0.805 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
54. METTL23 ENSGALG00000001790 7906 1.552 - - - - - 0.703 0.849 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
55. SCO1 ENSGALG00000030475 7304 1.551 - - - - - - 0.769 - 0.782 - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
56. SMDT1 ENSGALG00000011897 9360 1.551 - - - - - - 0.778 - 0.773 - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
57. RSRC1 ENSGALG00000009669 5829 1.551 - - - - - - 0.828 0.723 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
58. MRPL46 ENSGALG00000006782 5033 1.55 - - - - - - - 0.801 0.749 - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
59. ENSGALG00000020510 ENSGALG00000020510 4037 1.55 - - - - - - 0.710 0.840 - -
60. YRDC ENSGALG00000029001 6529 1.546 - - - - - - 0.812 0.734 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
61. COMMD10 ENSGALG00000002308 7442 1.545 - - - - - - 0.781 - 0.764 - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
62. SETD3 ENSGALG00000034802 4125 1.545 - - - - - - 0.741 0.804 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
63. XBP1 ENSGALG00000005796 14007 1.544 - - - - - - 0.752 0.792 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
64. C19H17ORF85 C19H17ORF85 2538 1.541 - - 0.766 - - - - 0.775 - -
65. DCPS ENSGALG00000031143 10191 1.54 - - - - - - 0.822 0.718 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
66. TM4SF18 4553 1.538 - - - - - - 0.711 0.827 - - transmembrane 4 L six family member 18, transcript variant X2
67. CHM ENSGALG00000006906 4953 1.537 - - - - - - 0.742 0.795 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
68. AZIN1 ENSGALG00000029295 11085 1.536 - - - - - - 0.772 0.764 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
69. UBE2V1 ENSGALG00000008015 17947 1.535 - - 0.733 - - - 0.802 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
70. NUP37 ENSGALG00000012759 9985 1.535 - - - - - - 0.733 0.802 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
71. SASS6 ENSGALG00000005302 4029 1.532 - - - - - - 0.741 0.791 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
72. MSANTD4 ENSGALG00000017177 3306 1.527 - - - - - - - 0.719 0.808 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
73. MMGT1 ENSGALG00000027199 5854 1.527 - - - - - - 0.774 0.753 - - membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:28100]
74. LSG1 ENSGALG00000007058 4591 1.525 - - - - - - 0.796 0.729 - - large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
75. GNS ENSGALG00000009856 3045 1.524 - - 0.749 - - - - - 0.775 - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
76. GABPB1 ENSGALG00000023440 5676 1.52 - - - - - - 0.746 0.774 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
77. AKT1 ENSGALG00000011620 4089 1.519 - - - - - - 0.732 - 0.787 - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
78. INCENP ENSGALG00000007537 16617 1.518 - - - - - - 0.750 0.768 - - inner centromere protein [Source:NCBI gene;Acc:396270]
79. SRBD1 ENSGALG00000009990 4568 1.515 - - - - - - 0.715 0.800 - - S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
80. ERBB2IP ERBB2IP 5800 1.514 - - 0.705 - - - 0.809 - - -
81. TMEM14A ENSGALG00000019894 5279 1.514 - - 0.734 - - - - 0.780 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
82. NDUFS1 ENSGALG00000008606 7898 1.513 - - 0.750 - - - 0.763 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
83. VATB VATB 13756 1.511 - - - - - - 0.803 - 0.708 -
84. FRAS1 ENSGALG00000010316 5008 1.511 - - - - - - 0.777 - 0.734 - Fraser extracellular matrix complex subunit 1, transcript variant X2
85. HMGB3 ENSGALG00000009071 12011 1.511 - - - - - - 0.772 0.739 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
86. CRNKL1 ENSGALG00000008429 7280 1.511 - - - - - - 0.784 - 0.727 - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
87. TBL3 ENSGALG00000005558 8363 1.508 - - - - - - 0.728 0.780 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]
88. WDR89 ENSGALG00000011827 1481 1.508 - - 0.750 - - - - 0.758 - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
89. MSMO1 ENSGALG00000009560 6928 1.507 - - - - - - 0.727 0.780 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
90. CAMK2G ENSGALG00000005088 5037 1.507 - - - - - - 0.759 - 0.748 - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
91. ENSGALG00000014171 ENSGALG00000014171 10383 1.507 - - - - - - 0.720 - 0.787 -
92. ASH2L ENSGALG00000003233 4814 1.504 - - - - - - 0.771 0.733 - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
93. CSRP2BP CSRP2BP 4679 1.503 - - - - - - 0.712 0.791 - -
94. DHX37 ENSGALG00000002964 3497 1.502 - - - - - - 0.724 0.778 - - DEAH-box helicase 37 [Source:HGNC Symbol;Acc:HGNC:17210]
95. QTRTD1 QTRTD1 10765 1.5 - - - - - - 0.740 0.760 - -
96. MKRN1 ENSGALG00000012852 6907 1.5 - - - - - - - 0.754 0.746 - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
97. PTPMT1 ENSGALG00000008091 6160 1.499 - - - - - - 0.725 0.774 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
98. TMEM38B ENSGALG00000027472 2465 1.499 - - 0.788 - - - - - 0.711 - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
99. TTLL5 ENSGALG00000010340 4875 1.497 - - - - - - - 0.719 0.778 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
100. ADI1 ENSGALG00000025796 8636 1.494 - - - - - - 0.723 0.771 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]

There are 1414 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA