Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRP12

Gene Name Gene ID Reads Annotation
RRP12 ENSGALG00000041331 3369 ribosomal RNA processing 12 homolog [Source:NCBI gene;Acc:423845]











Genes with expression patterns similar to RRP12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRP12 ENSGALG00000041331 3369 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal RNA processing 12 homolog [Source:NCBI gene;Acc:423845]
2. ENTPD5 ENSGALG00000010202 69 1.503 - - 0.791 - - - - - - 0.712 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
3. PTPN5 ENSGALG00000006368 440 0.895 - - 0.895 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
4. PVALB1 PVALB1 267 0.871 - - 0.871 - - - - - - -
5. PDCD4 ENSGALG00000008700 574 0.863 - - 0.863 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
6. SURF2 ENSGALG00000003181 3500 0.859 - - 0.859 - - - - - - - surfeit 2 [Source:NCBI gene;Acc:417156]
7. C-MET C-MET 1650 0.851 - - 0.851 - - - - - - -
8. BARX2B BARX2B 1983 0.848 - - 0.848 - - - - - - -
9. ZC3H13 ENSGALG00000016984 21043 0.846 - - 0.846 - - - - - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
10. INVS ENSGALG00000013441 1123 0.844 - - 0.844 - - - - - - - inversin [Source:NCBI gene;Acc:395234]
11. CTSO ENSGALG00000009373 4186 0.841 - - 0.841 - - - - - - - cathepsin O [Source:NCBI gene;Acc:422410]
12. CASP9 ENSGALG00000001366 1356 0.831 - - 0.831 - - - - - - - caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]
13. DEPDC5 ENSGALG00000006766 1592 0.83 - - 0.830 - - - - - - - DEP domain containing 5, transcript variant X6
14. CAMK2D ENSGALG00000041635 3384 0.828 - - 0.828 - - - - - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
15. AGPAT9 AGPAT9 1823 0.828 - - 0.828 - - - - - - -
16. WBSCR17 581 0.825 - - 0.825 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
17. PCMTD2 ENSGALG00000005901 1833 0.821 - - 0.821 - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
18. TMEM200C ENSGALG00000030210 1434 0.82 - - 0.820 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
19. NLGN1 ENSGALG00000040938 651 0.816 - - 0.816 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
20. NAT9 ENSGALG00000007723 2098 0.815 - - 0.815 - - - - - - - N-acetyltransferase 9 (putative), transcript variant X7
21. DLX5 ENSGALG00000009129 1395 0.814 - - 0.814 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
22. ERI1 ENSGALG00000011448 3236 0.814 - - 0.814 - - - - - - - exoribonuclease 1 [Source:NCBI gene;Acc:422629]
23. CHCHD4 ENSGALG00000006328 5860 0.809 - - 0.809 - - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
24. SNX2 ENSGALG00000005337 590 0.802 - - 0.802 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
25. RIPPLY3 1380 0.801 - - 0.801 - - - - - - - ripply transcriptional repressor 3
26. CXorf30 CXorf30 172 0.8 - - 0.800 - - - - - - -
27. ATP2B4 ENSGALG00000003601 3746 0.797 - - 0.797 - - - - - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
28. COL6A1 ENSGALG00000005974 1991 0.797 - - 0.797 - - - - - - - collagen type VI alpha 1 chain [Source:NCBI gene;Acc:396000]
29. MAK16 ENSGALG00000001663 7455 0.796 - - 0.796 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
30. DDX18 ENSGALG00000012147 12463 0.795 - - 0.795 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
31. DHCR7 ENSGALG00000004106 4731 0.794 - - 0.794 - - - - - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
32. CCNB3 ENSGALG00000025810 2115 0.794 - - 0.794 - - - - - - - cyclin B3 [Source:NCBI gene;Acc:396167]
33. LZIC ENSGALG00000002616 9052 0.792 - - 0.792 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
34. GPBP1L1 ENSGALG00000010276 10253 0.79 - - 0.790 - - - - - - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
35. B3GNT7 ENSGALG00000007701 929 0.785 - - 0.785 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
36. TRIM45 ENSGALG00000014818 1258 0.784 - - 0.784 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
37. C8H1ORF52 C8H1ORF52 118 0.783 - - 0.783 - - - - - - -
38. TRANK1 ENSGALG00000037629 2268 0.783 - - 0.783 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
39. FBXO34 ENSGALG00000032563 656 0.782 - - 0.782 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
40. TSEN2 ENSGALG00000004981 1929 0.782 - - 0.782 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
41. ETV4 ENSGALG00000036678 2424 0.782 - - 0.782 - - - - - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
42. KIAA0195 KIAA0195 48 0.78 - - 0.780 - - - - - - -
43. FAM178A FAM178A 2738 0.779 - - 0.779 - - - - - - -
44. LRR1 ENSGALG00000012230 1062 0.778 - - 0.778 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
45. SCPEP1 ENSGALG00000003185 2322 0.778 - - 0.778 - - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
46. IP6K1 ENSGALG00000002510 827 0.778 - - 0.778 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
47. ADAMTS2 ENSGALG00000032974 141 0.778 - - 0.778 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
48. RHOC ENSGALG00000001569 53 0.778 - - 0.778 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
49. PTDSS1 ENSGALG00000030185 5515 0.778 - - 0.778 - - - - - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
50. POMC ENSGALG00000016600 99 0.777 - - 0.777 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
51. ENSGALG00000023180 ENSGALG00000023180 83 0.777 - - 0.777 - - - - - - -
52. GRIK3 ENSGALG00000002098 111 0.776 - - 0.776 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
53. MGMT ENSGALG00000042949 53 0.776 - - 0.776 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
54. PLEKHG5 ENSGALG00000027476 42 0.775 - - 0.775 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
55. VRTN ENSGALG00000010232 692 0.775 - - 0.775 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
56. WDR60 1631 0.772 - - 0.772 - - - - - - - WD repeat domain 60, transcript variant X4
57. MRPL30 ENSGALG00000016760 16965 0.772 - - 0.772 - - - - - - - mitochondrial ribosomal protein L30
58. DBI ENSGALG00000012112 6910 0.772 - - 0.772 - - - - - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
59. MRPS27 ENSGALG00000015002 6541 0.772 - - 0.772 - - - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
60. PKP4 ENSGALG00000012561 3087 0.771 - - 0.771 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
61. MT1 MT1 218 0.771 - - 0.771 - - - - - - -
62. TTC32 ENSGALG00000016476 2962 0.77 - - 0.770 - - - - - - - tetratricopeptide repeat domain 32 [Source:HGNC Symbol;Acc:HGNC:32954]
63. RPL30 ENSGALG00000029897 58241 0.77 - - 0.770 - - - - - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
64. SYNCRIP ENSGALG00000015830 30555 0.77 - - 0.770 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
65. FAM211B FAM211B 3808 0.77 - - 0.770 - - - - - - -
66. ARFRP1 ENSGALG00000006101 3743 0.77 - - 0.770 - - - - - - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
67. HRAS1 HRAS1 7988 0.769 - - 0.769 - - - - - - -
68. FOXM1 ENSGALG00000013420 2274 0.768 - - 0.768 - - - - - - - forkhead box M1 [Source:NCBI gene;Acc:430534]
69. gga-mir-1723 ENSGALG00000025386 6662 0.768 - - 0.768 - - - - - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
70. FURIN ENSGALG00000008341 2609 0.765 - - 0.765 - - - - - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
71. RASSF8 ENSGALG00000014041 850 0.765 - - 0.765 - - - - - - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
72. MANEA ENSGALG00000015590 2286 0.764 - - 0.764 - - - - - - - mannosidase endo-alpha
73. METTL6 ENSGALG00000040665 4467 0.764 - - 0.764 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
74. RSPO3 ENSGALG00000042607 2031 0.764 - - 0.764 - - - - - - - Gallus gallus R-spondin 3 (RSPO3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319025]
75. CDC42BPA ENSGALG00000009158 3926 0.762 - - 0.762 - - - - - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
76. SECISBP2 ENSGALG00000010694 6990 0.762 - - 0.762 - - - - - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
77. GOLGA2 ENSGALG00000004881 677 0.762 - - 0.762 - - - - - - - golgin A2, transcript variant X7
78. USP15 ENSGALG00000030024 2761 0.761 - - 0.761 - - - - - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
79. FAM114A2 ENSGALG00000004068 2970 0.761 - - 0.761 - - - - - - - family with sequence similarity 114 member A2 [Source:HGNC Symbol;Acc:HGNC:1333]
80. PELI1 ENSGALG00000008837 11561 0.761 - - 0.761 - - - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
81. YLPM1 671 0.761 - - 0.761 - - - - - - - YLP motif containing 1
82. C19H17ORF85 C19H17ORF85 2538 0.76 - - 0.760 - - - - - - -
83. LHFP 167 0.76 - - 0.760 - - - - - - - lipoma HMGIC fusion partner
84. Sep-02 Sep-02 206 0.76 - - 0.760 - - - - - - -
85. CPT1A ENSGALG00000007077 3199 0.759 - - 0.759 - - - - - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
86. SORCS1 ENSGALG00000008465 468 0.759 - - 0.759 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
87. SEC24A ENSGALG00000006417 1805 0.759 - - 0.759 - - - - - - - Gallus gallus SEC24 homolog A, COPII coat complex component (SEC24A), mRNA. [Source:RefSeq mRNA;Acc:NM_001321593]
88. UBE2V1 ENSGALG00000008015 17947 0.759 - - 0.759 - - - - - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
89. C14orf1 C14orf1 14289 0.757 - - 0.757 - - - - - - -
90. GOLGA3 ENSGALG00000002158 1342 0.757 - - 0.757 - - - - - - - golgin A3 [Source:HGNC Symbol;Acc:HGNC:4426]
91. LRP2 ENSGALG00000010858 363 0.756 - - 0.756 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
92. PXDN ENSGALG00000016377 4255 0.755 - - 0.755 - - - - - - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
93. IGDCC4 ENSGALG00000007410 5457 0.755 - - 0.755 - - - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
94. ATP2B2 ENSGALG00000030908 584 0.755 - - 0.755 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
95. DLG3 ENSGALG00000041900 3016 0.755 - - 0.755 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
96. CTNNBIP1 ENSGALG00000026306 8049 0.755 - - 0.755 - - - - - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
97. CEP70 ENSGALG00000012087 7992 0.755 - - 0.755 - - - - - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
98. LGALS3 ENSGALG00000012173 3306 0.755 - - 0.755 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
99. ACOT9 ENSGALG00000016351 330 0.754 - - 0.754 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
100. NCAPD3 ENSGALG00000001491 221 0.754 - - 0.754 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3

There are 144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA