Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRM2

Gene Name Gene ID Reads Annotation
RRM2 ENSGALG00000016442 40375 ribonucleotide reductase regulatory subunit M2











Genes with expression patterns similar to RRM2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRM2 ENSGALG00000016442 40375 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - ribonucleotide reductase regulatory subunit M2
2. STK4 ENSGALG00000004098 11366 1.572 - - - - 0.810 - 0.762 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
3. CDCA7 ENSGALG00000040833 7484 1.524 - - - - 0.761 - - 0.763 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
4. FUNDC2 ENSGALG00000029585 9334 1.509 - - - - 0.751 - - 0.758 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
5. SFT2D1 ENSGALG00000020005 10855 1.48 - - - - - - 0.717 0.763 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
6. MAPK6 ENSGALG00000031448 28384 0.857 - - - - - - - 0.857 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
7. CDCA3 ENSGALG00000014513 17047 0.851 - - - - 0.851 - - - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
8. ATP5C1 53961 0.851 - - - - - - 0.851 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
9. POLR2E ENSGALG00000002591 26405 0.847 - - - - 0.847 - - - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
10. MRPS26 ENSGALG00000014118 27422 0.842 - - - - 0.842 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
11. GSPT1 15580 0.837 - - - - 0.837 - - - - - G1 to S phase transition 1, transcript variant X1
12. HDLBP ENSGALG00000005823 24636 0.836 - - - - 0.836 - - - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
13. SRSF7 ENSGALG00000033120 43444 0.833 - - - - 0.833 - - - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
14. FAM98A ENSGALG00000010428 9585 0.831 - - - - - - - 0.831 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
15. PSMB1 ENSGALG00000011174 40689 0.83 - - - - - - 0.830 - - - proteasome subunit beta 1 [Source:NCBI gene;Acc:421551]
16. CSNK2A1 ENSGALG00000006197 41409 0.827 - - - - 0.827 - - - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
17. TNFAIP8L1 ENSGALG00000004266 12611 0.824 - - - - - - - 0.824 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
18. HDAC8 ENSGALG00000004825 12066 0.819 - - - - 0.819 - - - - - histone deacetylase 8, transcript variant X2
19. USMG5 ENSGALG00000034645 33263 0.819 - - - - 0.819 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
20. Mar-05 Mar-05 6330 0.818 - - - - 0.818 - - - - -
21. EIF3B ENSGALG00000040999 49971 0.817 - - - - 0.817 - - - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
22. HP1BP3 ENSGALG00000010079 33723 0.814 - - - - 0.814 - - - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
23. G3BP1 ENSGALG00000004160 36795 0.812 - - - - 0.812 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
24. GABARAPL2 ENSGALG00000003208 9195 0.807 - - - - 0.807 - - - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
25. DKK3 ENSGALG00000005551 7807 0.807 - - - - 0.807 - - - - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
26. CDCA4 ENSGALG00000011692 10381 0.805 - - - - 0.805 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
27. SPEN ENSGALG00000036932 9688 0.803 - - - - 0.803 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
28. PEBP1 ENSGALG00000007403 77502 0.803 - - - - - - 0.803 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
29. PSMD3 ENSGALG00000033162 25615 0.802 - - - - 0.802 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
30. GSTO1 ENSGALG00000008409 7561 0.801 - - - - 0.801 - - - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
31. TBL1X ENSGALG00000040006 28597 0.799 - - - - 0.799 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
32. UQCRH ENSGALG00000017380 55734 0.796 - - - - 0.796 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
33. PDE6D ENSGALG00000033062 20177 0.794 - - - - - - 0.794 - - - phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]
34. COX7A2L ENSGALG00000037996 13646 0.794 - - - - - - - 0.794 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
35. MYBL2 ENSGALG00000003503 15875 0.793 - - - - 0.793 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
36. PSMB3 ENSGALG00000001597 22588 0.792 - - - - - - 0.792 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
37. MRPL21 ENSGALG00000004362 20796 0.791 - - - - 0.791 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
38. SRP19 ENSGALG00000000218 14207 0.791 - - - - 0.791 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
39. HN1 HN1 34386 0.79 - - - - - - 0.790 - - -
40. ENSGALG00000026041 ENSGALG00000026041 13390 0.787 - - - - - - 0.787 - - -
41. CEP78 ENSGALG00000015179 5227 0.787 - - - - 0.787 - - - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
42. MINOS1 ENSGALG00000004039 37740 0.787 - - - - 0.787 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
43. NDUFS4 ENSGALG00000028026 25876 0.787 - - - - 0.787 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
44. RHOT1 ENSGALG00000003397 5149 0.787 - - - - 0.787 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
45. PRTG ENSGALG00000037336 34665 0.784 - - - - - - - 0.784 - - protogenin [Source:NCBI gene;Acc:415407]
46. RPL21 ENSGALG00000027035 244232 0.78 - - - - - - 0.780 - - - ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
47. PSMC1 ENSGALG00000010675 20633 0.78 - - - - 0.780 - - - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
48. PDHB ENSGALG00000029576 12254 0.779 - - - - - - - 0.779 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
49. NEK6 ENSGALG00000001118 20333 0.779 - - - - 0.779 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
50. DNAJC9 ENSGALG00000002701 19249 0.779 - - - - 0.779 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
51. MRPL54 ENSGALG00000027611 39450 0.776 - - - - - - - 0.776 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
52. RBM7 ENSGALG00000007017 8779 0.776 - - - - - - - 0.776 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
53. SFXN5 ENSGALG00000016094 2678 0.776 - - - - 0.776 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
54. ZC3H6 ENSGALG00000008269 10353 0.776 - - - - 0.776 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
55. gga-mir-6587 ENSGALG00000026386 9441 0.775 - - - - - - - 0.775 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
56. EXO1 ENSGALG00000010748 7572 0.775 - - - - - - - 0.775 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
57. UBE2D3 ENSGALG00000012311 39831 0.774 - - - - 0.774 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
58. KPNA2 ENSGALG00000003584 76058 0.773 - - - - 0.773 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
59. DENR ENSGALG00000003795 30805 0.773 - - - - 0.773 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
60. PPM1D ENSGALG00000035610 6530 0.772 - - - - - - - 0.772 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
61. STX2 ENSGALG00000002536 10438 0.771 - - - - - - 0.771 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
62. IGF2BP3 ENSGALG00000010961 81524 0.77 - - - - - - 0.770 - - - insulin like growth factor 2 mRNA binding protein 3 [Source:NCBI gene;Acc:420617]
63. MYO9A ENSGALG00000033618 4505 0.768 - - - - 0.768 - - - - - myosin IXA, transcript variant X10
64. RBMX ENSGALG00000006457 34009 0.768 - - - - - - 0.768 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
65. HOXA9 ENSGALG00000028983 9298 0.767 - 0.767 - - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
66. G3BP2 ENSGALG00000010882 21129 0.767 - - - - - - - 0.767 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
67. KIF2A ENSGALG00000014737 16391 0.767 - - - - 0.767 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
68. UTP6 ENSGALG00000003260 4909 0.767 - - - - 0.767 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
69. ZDHHC6 ENSGALG00000008870 16575 0.767 - - - - 0.767 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
70. ACVR2B ENSGALG00000006158 8692 0.766 - - - - - - - - 0.766 - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
71. HNRNPAB ENSGALG00000014381 41009 0.765 - 0.765 - - - - - - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
72. SLMO2 SLMO2 9207 0.765 - - - - 0.765 - - - - -
73. TAF3 ENSGALG00000006731 15569 0.765 - - - - 0.765 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
74. BASP1 ENSGALG00000012952 19549 0.764 - - - - 0.764 - - - - - brain abundant membrane attached signal protein 1 [Source:NCBI gene;Acc:373905]
75. MEF2BNB MEF2BNB 5578 0.764 - - - - 0.764 - - - - -
76. SELK SELK 15022 0.764 - - - - - - 0.764 - - -
77. UBR7 ENSGALG00000010842 16488 0.764 - - - - - - 0.764 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
78. DDOST ENSGALG00000010073 18707 0.764 - - - - 0.764 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
79. RCOR3 ENSGALG00000009871 7022 0.762 - - - - - - - 0.762 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
80. CETN1 ENSGALG00000026741 7243 0.762 - - - - - - - 0.762 - - centrin 1 [Source:NCBI gene;Acc:422668]
81. CNOT7 ENSGALG00000013649 23435 0.762 - - - - - - 0.762 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
82. CCT4 ENSGALG00000008812 78267 0.76 - 0.760 - - - - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
83. PSMG3 ENSGALG00000004203 11240 0.76 - - - - 0.760 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
84. DLL1 ENSGALG00000011182 1613 0.758 - - - - 0.758 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
85. PRPF8 ENSGALG00000002943 31189 0.758 - - - - - - 0.758 - - - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
86. TMEM126A ENSGALG00000014066 6149 0.758 - - - - - - - 0.758 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
87. AP2B1 ENSGALG00000042125 13229 0.757 - - - - - - - 0.757 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
88. CRNKL1 ENSGALG00000008429 7280 0.757 - - - - - - - 0.757 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
89. LGALS1 ENSGALG00000012420 13993 0.757 - - - - 0.757 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
90. JSC JSC 7982 0.757 - - - - - - - 0.757 - -
91. XPO5 ENSGALG00000010341 24765 0.757 - - - - - - - 0.757 - - exportin 5 [Source:NCBI gene;Acc:421450]
92. PRCC ENSGALG00000040696 9346 0.756 - - - - 0.756 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
93. RPL22 ENSGALG00000000719 74238 0.755 - - - - 0.755 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
94. CDKN1B ENSGALG00000022980 4606 0.755 - - - - 0.755 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
95. KRT19 ENSGALG00000019719 38711 0.753 - 0.753 - - - - - - - - keratin 19 [Source:NCBI gene;Acc:395861]
96. NUP88 ENSGALG00000032280 9847 0.753 - - - - 0.753 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
97. EI24 ENSGALG00000038097 24081 0.753 - - - - - 0.753 - - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
98. CCDC132 CCDC132 2632 0.752 - - - - 0.752 - - - - -
99. LRPPRC ENSGALG00000009967 17091 0.751 - - - - - - - 0.751 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
100. C6ORF192 C6ORF192 4224 0.75 - - - - - - - 0.750 - -

There are 159 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA