Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RRM1

Gene Name Gene ID Reads Annotation
RRM1 ENSGALG00000017350 47890 ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]











Genes with expression patterns similar to RRM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RRM1 ENSGALG00000017350 47890 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleotide reductase catalytic subunit M1 [Source:NCBI gene;Acc:419081]
2. HSP90AA1 ENSGALG00000033212 55740 1.722 - - - - 0.940 - 0.782 - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
3. HNRNPAB ENSGALG00000014381 41009 1.57 - - - - 0.793 - 0.777 - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
4. NOVA1 ENSGALG00000009850 7584 1.55 - - 0.811 - - - - 0.739 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
5. RBM5 30998 1.543 - - 0.739 - 0.804 - - - - - RNA binding motif protein 5, transcript variant X1
6. RPL30 ENSGALG00000029897 58241 1.507 - - 0.723 - - - 0.784 - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
7. MAP2 ENSGALG00000002789 6597 1.494 - - 0.786 - - - - 0.708 - - microtubule associated protein 2, transcript variant X33
8. NDUFB9 ENSGALG00000042242 115459 0.899 - - - - - - 0.899 - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
9. EFNB2 ENSGALG00000029175 5664 0.885 - - - - 0.885 - - - - - ephrin B2 [Source:NCBI gene;Acc:395625]
10. DRG1 ENSGALG00000006921 10791 0.884 - - - - 0.884 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
11. CKAP5 ENSGALG00000008325 8494 0.884 - - - - 0.884 - - - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
12. MPPED1 ENSGALG00000014186 5726 0.883 - - - - 0.883 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
13. CCNYL1 ENSGALG00000008485 11958 0.883 - - - - 0.883 - - - - - cyclin Y like 1
14. SUGT1 ENSGALG00000016946 22881 0.881 - - - - 0.881 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
15. TPP2 ENSGALG00000016865 7509 0.878 - - - - 0.878 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
16. FOXK2 ENSGALG00000001577 6346 0.878 - - - - 0.878 - - - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
17. SRSF6 ENSGALG00000000990 12424 0.875 - - - - 0.875 - - - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
18. PSMD12 ENSGALG00000026225 17473 0.875 - - - - 0.875 - - - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
19. BRCC3 ENSGALG00000005383 4844 0.874 - - - - 0.874 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
20. MOCS2 ENSGALG00000014906 4974 0.872 - - - - 0.872 - - - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
21. MTG1 ENSGALG00000003549 5032 0.871 - - - - 0.871 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
22. MRPL32 ENSGALG00000037258 6861 0.87 - - - - 0.870 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
23. RANBP1 ENSGALG00000002107 17715 0.87 - - - - 0.870 - - - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
24. ADSL ENSGALG00000012034 10280 0.869 - - - - 0.869 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
25. CLSPN ENSGALG00000002346 2590 0.868 - - - - 0.868 - - - - - claspin [Source:NCBI gene;Acc:428223]
26. PRKACB ENSGALG00000028530 12506 0.867 - - - - 0.867 - - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
27. MAP3K13 ENSGALG00000006655 632 0.867 - - - - 0.867 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
28. PDXP ENSGALG00000023131 2663 0.866 - - - - 0.866 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
29. PCIF1 ENSGALG00000023547 867 0.866 - - - - 0.866 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
30. FOCAD ENSGALG00000015071 3677 0.866 - - - - 0.866 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
31. TMEM65 ENSGALG00000037371 776 0.865 - - - - 0.865 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
32. CRIPT ENSGALG00000010014 4311 0.865 - - - - 0.865 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
33. KAT6A ENSGALG00000003641 2631 0.865 - - - - 0.865 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
34. AIP ENSGALG00000040247 4166 0.865 - - - - 0.865 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
35. NMT1 ENSGALG00000000857 5770 0.864 - - - - 0.864 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
36. DARS ENSGALG00000012355 2887 0.864 - - - - 0.864 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
37. TMEM167A ENSGALG00000027332 13862 0.864 - - - - 0.864 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
38. CDR2L ENSGALG00000026295 4142 0.863 - - - - 0.863 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
39. CSNK1E ENSGALG00000032257 2165 0.863 - - - - 0.863 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
40. C9orf89 C9orf89 3056 0.863 - - - - 0.863 - - - - -
41. ACO2 ENSGALG00000011950 30387 0.863 - - - - - - - 0.863 - - aconitase 2 [Source:NCBI gene;Acc:374009]
42. TIMM21 ENSGALG00000013709 3215 0.863 - - - - 0.863 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
43. UTP15 ENSGALG00000013510 13122 0.862 - - - - 0.862 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
44. ENSGALG00000005720 ENSGALG00000005720 1666 0.862 - - - - 0.862 - - - - -
45. COPG2 ENSGALG00000008144 4542 0.862 - - - - 0.862 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
46. COPA ENSGALG00000009153 11618 0.862 - - - - 0.862 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
47. FAM18B1 ENSGALG00000001335 5177 0.862 - - - - 0.862 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
48. EIF4G3 ENSGALG00000010084 5881 0.862 - - - - 0.862 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
49. HABP4 ENSGALG00000012628 2894 0.862 - - - - 0.862 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
50. TSPAN5 ENSGALG00000012227 8703 0.862 - - - - 0.862 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
51. RBM15B 5416 0.861 - - - - 0.861 - - - - - RNA binding motif protein 15B
52. AEN ENSGALG00000044204 2633 0.861 - - - - 0.861 - - - - - apoptosis enhancing nuclease, transcript variant X1
53. LFNG ENSGALG00000038515 5178 0.86 - - - - 0.860 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
54. MXD4 ENSGALG00000015688 1472 0.86 - - - - 0.860 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
55. FBXW7 ENSGALG00000010103 5982 0.86 - - - - 0.860 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
56. ITPK1 ENSGALG00000034898 4212 0.86 - - - - 0.860 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
57. RHBDF1 ENSGALG00000007434 2359 0.859 - - - - 0.859 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
58. NOL12 ENSGALG00000012410 5658 0.859 - - - - 0.859 - - - - - nucleolar protein 12
59. TDRD3 ENSGALG00000016936 3412 0.858 - - - - 0.858 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
60. TIMM22 ENSGALG00000004383 7619 0.858 - - - - - - - 0.858 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
61. LSMD1 LSMD1 2562 0.858 - - - - 0.858 - - - - -
62. SFRP2 ENSGALG00000009241 4716 0.858 - - - - 0.858 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
63. TRAM1 ENSGALG00000041112 22876 0.857 - - - - 0.857 - - - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
64. ZNF217 ZNF217 14511 0.857 - - - - 0.857 - - - - -
65. SRP68 ENSGALG00000002062 7370 0.857 - - - - 0.857 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
66. BTBD7 4136 0.857 - - - - 0.857 - - - - - BTB domain containing 7, transcript variant X2
67. NDUFB4 ENSGALG00000027688 8951 0.857 - - - - 0.857 - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
68. PAXIP1 ENSGALG00000036064 3120 0.856 - - - - 0.856 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
69. MAP2K4 ENSGALG00000032178 5982 0.856 - - - - 0.856 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
70. GPALPP1 ENSGALG00000031567 4221 0.855 - - - - 0.855 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
71. MAP1LC3A ENSGALG00000038721 2230 0.855 - - - - 0.855 - - - - - microtubule associated protein 1 light chain 3 alpha
72. CNOT2 ENSGALG00000010042 7612 0.855 - - - - 0.855 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
73. LAP3 ENSGALG00000006334 21076 0.855 - - - - 0.855 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
74. BUB1 ENSGALG00000008233 11536 0.855 - - - - 0.855 - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
75. LASP-2 LASP-2 4415 0.855 - - - - 0.855 - - - - -
76. KDM1A ENSGALG00000033469 20632 0.854 - - - - 0.854 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
77. COL4A5 ENSGALG00000008141 15874 0.854 - - - - 0.854 - - - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
78. ZNF326 ENSGALG00000006113 15141 0.853 - - - - 0.853 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
79. B4GAL-T7 B4GAL-T7 12356 0.853 - - - - 0.853 - - - - -
80. gga-mir-1778 ENSGALG00000025181 8765 0.853 - - - - 0.853 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
81. WDR36 ENSGALG00000000247 11277 0.853 - - - - 0.853 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
82. SOD2 ENSGALG00000011661 13178 0.853 - - - - 0.853 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
83. HNRNPLL ENSGALG00000008504 14719 0.852 - - - - 0.852 - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
84. CCDC101 CCDC101 9111 0.852 - - - - 0.852 - - - - -
85. SH3GLB1 ENSGALG00000006284 12764 0.852 - - - - 0.852 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
86. BAMBI ENSGALG00000040993 7562 0.852 - - - - 0.852 - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
87. ACTR6 ENSGALG00000040976 31271 0.851 - - - - 0.851 - - - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
88. PIK3CD ENSGALG00000002583 1036 0.851 - - - - 0.851 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
89. GLB1L2 ENSGALG00000001604 4057 0.851 - - - - 0.851 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
90. TLK1 ENSGALG00000009569 5446 0.851 - - - - 0.851 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
91. WSB2 ENSGALG00000008151 13246 0.85 - - - - 0.850 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
92. MANF ENSGALG00000002362 7518 0.85 - - - - 0.850 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
93. BCCIP ENSGALG00000006617 13291 0.849 - - - - 0.849 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
94. ASPM ENSGALG00000032398 12784 0.849 - - - - 0.849 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
95. TXNDC9 ENSGALG00000032090 6804 0.848 - - - - 0.848 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
96. DIABLO ENSGALG00000004412 9499 0.848 - - - - 0.848 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
97. TIA1 ENSGALG00000013879 16330 0.847 - - - - 0.847 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
98. DYNC1LI1 ENSGALG00000011491 11011 0.846 - - - - 0.846 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
99. SMS ENSGALG00000016379 11607 0.845 - - - - 0.845 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
100. CISD2 ENSGALG00000027860 12968 0.842 - - - - 0.842 - - - - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA