Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPUSD2

Gene Name Gene ID Reads Annotation
RPUSD2 ENSGALG00000041216 9 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]











Genes with expression patterns similar to RPUSD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPUSD2 ENSGALG00000041216 9 4 - - 1.000 1.000 - 1.000 - - - 1.000 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
2. HOXD11 ENSGALG00000039629 658 1.934 - - - 0.939 - - - - - 0.995 homeobox D11 [Source:NCBI gene;Acc:395328]
3. C11H16ORF70 C11H16ORF70 7 1.735 - - 0.755 - - - - - - 0.980
4. PLXNB1 23 1.733 - - 0.810 0.923 - - - - - - plexin B1, transcript variant X2
5. LRRC47 7 1.731 - - 0.731 1.000 - - - - - - leucine rich repeat containing 47
6. FHL2 ENSGALG00000016797 11 1.67 - - 0.873 - - - - - - 0.797 four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
7. ENPEP ENSGALG00000031410 147 1.6 - - - - - 0.824 - - - 0.776 glutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]
8. IL22RA1 ENSGALG00000004221 71 1.585 - - 0.763 - - - - - - 0.822 interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
9. DLST ENSGALG00000010286 19 1.578 - - 0.808 - - - - - - 0.770 dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
10. TMEM11 ENSGALG00000004749 206 1 - - - 1.000 - - - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
11. PLD5 ENSGALG00000010737 5 1 - - - 1.000 - - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
12. ENSGALG00000013912 ENSGALG00000013912 3 1 - - - 1.000 - - - - - -
13. CAV3 ENSGALG00000008351 16 1 - - - 1.000 - - - - - - caveolin 3 [Source:NCBI gene;Acc:378796]
14. BRPF3 8 1 - - - - - 1.000 - - - - bromodomain and PHD finger containing, 3, transcript variant X2
15. GPR98 GPR98 22 1 - - - 1.000 - - - - - -
16. ASB7 ENSGALG00000007115 3 1 - - - 1.000 - - - - - - ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
17. ENSGALG00000006495 ENSGALG00000006495 4 1 - - - 1.000 - - - - - -
18. WNT3A ENSGALG00000042657 22 1 - - - 1.000 - - - - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
19. ENSGALG00000027405 ENSGALG00000027405 1 1 - - - 1.000 - - - - - -
20. ENSGALG00000027565 ENSGALG00000027565 2 1 - - - 1.000 - - - - - -
21. KLHL14 ENSGALG00000036969 3 1 - - - 1.000 - - - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
22. LHFPL2 ENSGALG00000004437 500 1 - - - 1.000 - - - - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
23. RAB11FIP5 1 1 - - - 1.000 - - - - - - RAB11 family interacting protein 5, transcript variant X1
24. ENSGALG00000023046 ENSGALG00000023046 1 1 - - - 1.000 - - - - - -
25. BTBD2 ENSGALG00000001019 510 1 - - - 1.000 - - - - - - BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15504]
26. DTX4 ENSGALG00000010835 25 1 - - - 1.000 - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
27. WNT3 ENSGALG00000001079 8 1 - - - 1.000 - - - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
28. AGO2 ENSGALG00000040957 25 0.995 - - - - - - - - - 0.995 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
29. ENSGALG00000016213 ENSGALG00000016213 33 0.995 - - - - - - - - - 0.995
30. CYP2H1 CYP2H1 363 0.995 - - - - - - - - - 0.995
31. ENSGALG00000026657 ENSGALG00000026657 4 0.995 - - - - - - - - - 0.995
32. ATP6V0E1 10 0.995 - - - - - - - - - 0.995 ATPase H+ transporting V0 subunit e1
33. ADORA2B ENSGALG00000014182 26 0.995 - - - - - - - - - 0.995 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
34. PPM1H ENSGALG00000009805 3 0.995 - - - - - - - - - 0.995 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
35. LCAT ENSGALG00000028928 484 0.993 - - - - - - - - - 0.993 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
36. KYNU ENSGALG00000012418 353 0.99 - - - - - - - - - 0.990 kynureninase, transcript variant X3
37. OLIG3 ENSGALG00000013862 51 0.987 - - - 0.987 - - - - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
38. SLC12A8 ENSGALG00000012045 39 0.984 - - - - - - - - - 0.984 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
39. WDR72 ENSGALG00000004545 5 0.983 - - - - - - - - - 0.983 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
40. DLX3 ENSGALG00000040529 37 0.982 - - - - - - - - - 0.982 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
41. NEIL3 ENSGALG00000010719 47 0.978 - - - - - - - - - 0.978 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
42. AGRP ENSGALG00000002244 27 0.976 - - - - - - - - - 0.976 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
43. JAKMIP1 ENSGALG00000015528 11 0.975 - - - - - - - - - 0.975 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
44. WDR41 ENSGALG00000004350 16 0.975 - - - - - - - - - 0.975 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
45. TPP1 52 0.973 - - - - - - - - - 0.973 tripeptidyl peptidase 1
46. SORBS1 ENSGALG00000038722 1 0.97 - - - 0.970 - - - - - - sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]
47. ACSS1 ENSGALG00000008632 397 0.969 - - - - - - - - - 0.969 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
48. ST6GALNAC3 ENSGALG00000009027 17 0.968 - - - - - - - - - 0.968 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
49. UROC1 ENSGALG00000006306 75 0.968 - - - - - - - - - 0.968 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
50. CNST ENSGALG00000010649 18 0.963 - - - - - - - - - 0.963 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
51. CELF4 ENSGALG00000002413 10 0.961 - - - - - 0.961 - - - - CUGBP Elav-like family member 4 [Source:HGNC Symbol;Acc:HGNC:14015]
52. LOC112532477 ENSGALG00000027520 40 0.955 - - - - - - - - - 0.955 fibrinogen-like protein 1-like protein
53. HPD ENSGALG00000004343 244 0.948 - - - - - - - - - 0.948 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]
54. ENSGALG00000012250 ENSGALG00000012250 581 0.947 - - - - - - - - - 0.947
55. GNB4 ENSGALG00000008983 26 0.944 - - - - - 0.944 - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
56. FAM13A ENSGALG00000010371 19 0.939 - - - - - - - - - 0.939 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
57. ENTPD7 ENSGALG00000023691 46 0.938 - - - - - - - - - 0.938 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
58. ENSGALG00000016141 ENSGALG00000016141 10 0.933 - - - - - - - - - 0.933
59. HGF/SF HGF/SF 345 0.926 - - - - - - - - - 0.926
60. TMEM206 ENSGALG00000009822 80 0.923 - - - - - - - - - 0.923 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
61. SIGIRR ENSGALG00000004267 72 0.922 - - 0.922 - - - - - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
62. TMEM9 ENSGALG00000000226 635 0.919 - - - - - - - - - 0.919 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
63. DISP3 ENSGALG00000004662 146 0.918 - - - - - - - - - 0.918 dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
64. ENSGALG00000005445 ENSGALG00000005445 16 0.914 - - - - - - - - - 0.914
65. TNIP2 ENSGALG00000015666 28 0.913 - - - - - - - - - 0.913 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
66. TBC1D8B ENSGALG00000009040 75 0.912 - - - - - - - - - 0.912 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
67. UIMC1 ENSGALG00000001158 22 0.908 - - - - - - - - - 0.908 ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
68. U4atac U4atac 23 0.903 - - 0.903 - - - - - - -
69. ENSGALG00000018733 ENSGALG00000018733 175 0.902 - - - - - - - - - 0.902
70. CACNB2 ENSGALG00000008591 53 0.901 - - - - - - - - - 0.901 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
71. MMACHC ENSGALG00000010234 77 0.9 - - - - - - - - - 0.900 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
72. SLC6A2 ENSGALG00000003560 108 0.899 - - - - - - - - - 0.899 solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
73. GPC6 ENSGALG00000016900 13 0.899 - - - - - - - - - 0.899 glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
74. ADAM33 ENSGALG00000030602 7 0.898 - - 0.898 - - - - - - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
75. WNT5B ENSGALG00000012998 35 0.897 - - - - - - - - - 0.897 Wnt family member 5B [Source:NCBI gene;Acc:418154]
76. RFX4 ENSGALG00000012647 119 0.897 - - - 0.897 - - - - - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]
77. SLC17A6 ENSGALG00000039254 16 0.885 - - 0.885 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
78. SYCP1 ENSGALG00000002511 13 0.884 - - 0.884 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
79. LOX ENSGALG00000028063 1488 0.883 - - - - - 0.883 - - - - lysyl oxidase [Source:NCBI gene;Acc:396474]
80. LRRC8C ENSGALG00000006170 43 0.881 - - - - - - - - - 0.881 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
81. DEF6 ENSGALG00000002615 1038 0.881 - - - - - - - - - 0.881 DEF6, guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:2760]
82. NTS ENSGALG00000027192 669 0.88 - - 0.880 - - - - - - - neurotensin [Source:NCBI gene;Acc:417883]
83. FBLN7 ENSGALG00000046358 27 0.879 - - 0.879 - - - - - - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
84. CXADR ENSGALG00000015701 96 0.879 - - 0.879 - - - - - - - coxsackie virus and adenovirus receptor, transcript variant X2
85. JAG1 ENSGALG00000009020 25 0.878 - - - 0.878 - - - - - - jagged 1 [Source:HGNC Symbol;Acc:HGNC:6188]
86. ARHGAP39 ENSGALG00000001536 15 0.877 - - - 0.877 - - - - - - Rho GTPase activating protein 39, transcript variant X2
87. GPSM2 ENSGALG00000002090 50 0.875 - - - 0.875 - - - - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
88. TJP3 ENSGALG00000000748 45 0.874 - - - - - - - - - 0.874 tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
89. ENSGALG00000009041 ENSGALG00000009041 27 0.873 - - 0.873 - - - - - - -
90. TNFAIP3 ENSGALG00000013861 11 0.873 - - 0.873 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
91. LOXHD1 ENSGALG00000037829 3 0.873 - - 0.873 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
92. POMGNT2 ENSGALG00000011518 36 0.873 - - 0.873 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
93. SNX8 ENSGALG00000004255 4 0.873 - - 0.873 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
94. ZMAT4 ENSGALG00000003470 2 0.873 - - 0.873 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
95. CLRN2 ENSGALG00000027453 3 0.873 - - 0.873 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
96. CNGA2 ENSGALG00000007282 2 0.873 - - 0.873 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
97. LRP3 ENSGALG00000004853 13 0.873 - - 0.873 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
98. ENSGALG00000026347 ENSGALG00000026347 2 0.873 - - 0.873 - - - - - - -
99. TLL2 ENSGALG00000005519 10 0.873 - - 0.873 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
100. GAN ENSGALG00000013437 11 0.873 - - 0.873 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]

There are 214 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA