Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RPUSD2

Gene Name Gene ID Reads Annotation
RPUSD2 ENSDARG00000060992 107 RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]










Genes with expression patterns similar to RPUSD2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RPUSD2 ENSDARG00000060992 107 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
2. tsc1a ENSDARG00000026048, ENSDARG00000113789, ENSDARG00000113892 439 3.129 0.795 0.759 - - - 0.765 0.810 - - TSC complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9111]
3. dlx1a ENSDARG00000013125 142 2.379 0.735 0.739 - - - 0.905 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
4. PEG3_11 PEG3_11 167 1.664 0.770 - - - - 0.894 - - -
5. cyp2k8 ENSDARG00000101190 69 1.654 - 0.719 - - - 0.935 - - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
6. EHD2 EHD2 23 1.637 - 0.821 - - - 0.816 - - -
7. yif1b ENSDARG00000040505 47 1.614 - 0.713 - - - 0.901 - - - Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
8. FRMPD2 ENSDARG00000074119 5 1.601 0.700 - - - - 0.901 - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
9. plat ENSDARG00000062707 491 1.6 - 0.747 - - - - 0.853 - - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
10. ugt2b3 46 1.594 0.700 - - - - 0.894 - - - UDP glucuronosyltransferase 2 family, polypeptide B3
11. ankrd16 ENSDARG00000003822, ENSDARG00000113646 64 1.585 - 0.712 - - - 0.873 - - - ankyrin repeat domain 16 [Source:ZFIN;Acc:ZDB-GENE-041210-253]
12. CU459160.1 CU459160.1 104 1.545 0.740 - - - - 0.805 - - -
13. gabbr2 ENSDARG00000061042 122 1.535 - - - - 0.711 0.824 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
14. IKBIP IKBIP 308 1.535 0.722 - - - - 0.813 - - -
15. LRRC61 ENSDARG00000077357 55 1.518 - 0.734 - - - - 0.784 - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
16. ppa2 ENSDARG00000009685 209 1.518 - 0.784 - - - - 0.734 - - pyrophosphatase (inorganic) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1857]
17. si:dkey-101k6.5 ENSDARG00000055136 253 1.517 0.810 - - - - - 0.707 - - si:dkey-101k6.5 [Source:ZFIN;Acc:ZDB-GENE-081105-143]
18. TTF1_3 TTF1_3 215 1.516 - 0.725 - - - - 0.791 - -
19. si:ch211-51n3.1 si:ch211-51n3.1 26 1.515 0.776 0.739 - - - - - - -
20. zgc:152863 ENSDARG00000099969 99 1.511 - 0.720 - - - 0.791 - - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
21. BX004880.2 BX004880.2 83 1.493 - 0.752 - - 0.741 - - - -
22. si:ch211-188c16.1 ENSDARG00000077288 16 1.477 - 0.739 - - 0.738 - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
23. METTL4 ENSDARG00000088999 160 1.463 - 0.713 - - - 0.750 - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
24. SPAG16 7 1.461 0.700 - - - 0.761 - - - - sperm associated antigen 16
25. fhl3b ENSDARG00000104315 359 1.455 0.731 0.724 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
26. rabl2 ENSDARG00000063321, ENSDARG00000109811, ENSDARG00000112447 301 1.443 - - - - - 0.702 0.741 - - RAB, member of RAS oncogene family-like 2 [Source:ZFIN;Acc:ZDB-GENE-060503-464]
27. CABZ01067072.1 CABZ01067072.1 17 1.439 0.700 0.739 - - - - - - -
28. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1.439 0.700 0.739 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
29. adam19b ENSDARG00000067545 162 1 1.000 - - - - - - - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
30. mir199-2 mir199-2 38 0.973 - - - - - 0.973 - - -
31. GPC5 GPC5 11 0.959 - - - - - 0.959 - - -
32. TSC22D1 ENSDARG00000038306 517 0.947 - 0.947 - - - - - - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
33. ENSDARG00000077141 ENSDARG00000077141 227 0.941 0.941 - - - - - - - -
34. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.941 - - - - - 0.941 - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
35. CCKBR CCKBR 88 0.934 0.934 - - - - - - - -
36. C21HXorf40A C21HXorf40A 216 0.932 0.932 - - - - - - - -
37. FILIP1 339 0.924 - - - - - 0.924 - - - filamin A interacting protein 1
38. abhd6a ENSDARG00000060756 122 0.924 - - - - - - 0.924 - - abhydrolase domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-090925-1]
39. ap5m1 ENSDARG00000031533 153 0.91 - - - - - 0.910 - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
40. CABZ01076234.1 CABZ01076234.1 49 0.908 - 0.908 - - - - - - -
41. rgs2 ENSDARG00000098761, ENSDARG00000109741 324 0.907 - - - - - 0.907 - - - regulator of G protein signaling 2 [Source:ZFIN;Acc:ZDB-GENE-040718-410]
42. si:ch211-260b17.6 32 0.905 - - - - - 0.905 - - - si:ch211-260b17.6
43. si:ch211-213a13.11 si:ch211-213a13.11 9 0.905 - - - - - 0.905 - - -
44. tango6 ENSDARG00000034001 203 0.904 - - - - - 0.904 - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
45. CABZ01118627.1 CABZ01118627.1 18 0.901 - - - - - 0.901 - - -
46. egr2a ENSDARG00000044098 1101 0.901 - - - - - 0.901 - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
47. zgc:174654 zgc:174654 54 0.901 - - - - - 0.901 - - -
48. gata1b ENSDARG00000059130 151 0.901 - - - - - 0.901 - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
49. abca4a ENSDARG00000057169 27 0.901 - - - - - 0.901 - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
50. RFESD_2 RFESD_2 29 0.901 - - - - - 0.901 - - -
51. NXPH4 11 0.901 - - - - - 0.901 - - - neurexophilin 4
52. DHDH DHDH 15 0.901 - - - - - 0.901 - - -
53. fut10 ENSDARG00000100322 22 0.901 - - - - - 0.901 - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
54. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 0.901 - - - - - 0.901 - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
55. RP1L1 RP1L1 15 0.901 - - - - - 0.901 - - -
56. CABZ01080492.1 CABZ01080492.1 495 0.901 - - - - - 0.901 - - -
57. BX649490.1 ENSDARG00000091718 7 0.901 - - - - - 0.901 - - - titin-like [Source:NCBI gene;Acc:101883412]
58. zgc:103519 zgc:103519 3 0.901 - - - - - 0.901 - - -
59. otogl ENSDARG00000088750 2 0.901 - - - - - 0.901 - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
60. zgc:171779 ENSDARG00000016908 26 0.901 - - - - - 0.901 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
61. pcyox1 ENSDARG00000103052 20 0.901 - - - - - 0.901 - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
62. si:ch211-261n9.3 si:ch211-261n9.3 2 0.901 - - - - - 0.901 - - -
63. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.901 - - - - - 0.901 - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
64. cyp27c1 ENSDARG00000092660 2 0.901 - - - - - 0.901 - - - cytochrome P450, family 27, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-080204-68]
65. necab1 ENSDARG00000056566, ENSDARG00000111028 26 0.901 - - - - - 0.901 - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
66. si:ch211-223a21.3 ENSDARG00000104737 28 0.901 - - - - - 0.901 - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
67. BX004980.1 ENSDARG00000099680 10 0.901 - - - - - 0.901 - - -
68. arhgef6 ENSDARG00000006683 59 0.901 - - - - - 0.901 - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
69. hsd17b1 ENSDARG00000027469 11 0.901 - - - - - 0.901 - - - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
70. WNT6 WNT6 11 0.901 - - - - - 0.901 - - -
71. OVOL1 75 0.901 - - - - - 0.901 - - - ovo-like zinc finger 1, transcript variant X1
72. ttll2 ENSDARG00000077853 9 0.901 - - - - - 0.901 - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
73. PEG3_10 PEG3_10 45 0.901 - - - - - 0.901 - - -
74. ANGEL1 ENSDARG00000077567 38 0.901 - - - - - 0.901 - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
75. mxtx1 ENSDARG00000069382 32 0.901 - - - - - 0.901 - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
76. abcg4b ENSDARG00000078068 180 0.901 - - - - - 0.901 - - - ATP-binding cassette, sub-family G (WHITE), member 4b [Source:ZFIN;Acc:ZDB-GENE-080215-10]
77. mxra5b ENSDARG00000076309 190 0.899 - - - - - 0.899 - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
78. ifnphi3 ENSDARG00000070676 7 0.898 - - - - - 0.898 - - - interferon phi 3 [Source:ZFIN;Acc:ZDB-GENE-071128-2]
79. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 0.898 - - - - - 0.898 - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
80. RCSD1 RCSD1 144 0.898 - - - - - 0.898 - - -
81. BX640547.1_1 ENSDARG00000092775 76 0.897 - - - - - 0.897 - - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
82. fermt3a fermt3a 56 0.897 - - - - - 0.897 - - -
83. ddx43 ENSDARG00000022614 48 0.897 - - - - - 0.897 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
84. zgc:174700_1 zgc:174700_1 60 0.897 - - - - - 0.897 - - -
85. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.896 - - - - - 0.896 - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
86. ALPK1 195 0.896 - 0.896 - - - - - - - alpha-kinase 1
87. si:dkey-14o1.14 si:dkey-14o1.14 142 0.893 - 0.893 - - - - - - -
88. ascc2 ENSDARG00000013058 228 0.893 - - - - - 0.893 - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
89. immp1l ENSDARG00000045935 175 0.892 - - - - - 0.892 - - - inner mitochondrial membrane peptidase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-070522-4]
90. usp40 ENSDARG00000071197 825 0.89 - - - - - 0.890 - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
91. plcd1a ENSDARG00000059123 46 0.889 - - - - - 0.889 - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
92. CAPN1_1 ENSDARG00000055338 288 0.889 - - - - - 0.889 - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
93. si:ch73-290k24.5 ENSDARG00000076310 39 0.889 - - - - - 0.889 - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
94. CU695006.1 CU695006.1 4 0.889 - - - - - 0.889 - - -
95. angptl6 ENSDARG00000020265 273 0.889 - - - - - 0.889 - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
96. ENSDARG00000078787 ENSDARG00000078787 97 0.889 - - - - - 0.889 - - -
97. nucb2b ENSDARG00000036291 911 0.888 - - - - - 0.888 - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
98. nedd1 ENSDARG00000013472 209 0.888 - - - - - 0.888 - - - neural precursor cell expressed, developmentally down-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2906]
99. btr16 ENSDARG00000028850 21 0.887 - - - - - - 0.887 - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
100. si:dkey-241l7.2 ENSDARG00000105335 6 0.886 - - - - - 0.886 - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]

There are 750 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA