Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPUSD1

Gene Name Gene ID Reads Annotation
RPUSD1 ENSGALG00000005315 651 RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]











Genes with expression patterns similar to RPUSD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPUSD1 ENSGALG00000005315 651 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
2. CLN8 ENSGALG00000039606 4209 1.668 - - 0.879 - - - - 0.789 - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
3. RASSF8 ENSGALG00000014041 850 1.659 - - 0.917 - - - - 0.742 - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
4. PON2 ENSGALG00000009689 1416 1.592 - - 0.879 - - - - 0.713 - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
5. LOC770996 ENSGALG00000016570 635 1.515 - - - - - - 0.730 0.785 - - L-gulonolactone oxidase-like
6. FBXL18 ENSGALG00000004611 97 1.487 - - - - - - 0.706 0.781 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
7. GRIK3 ENSGALG00000002098 111 0.984 - - 0.984 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
8. RHOC ENSGALG00000001569 53 0.983 - - 0.983 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
9. ACOT9 ENSGALG00000016351 330 0.983 - - 0.983 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
10. POMC ENSGALG00000016600 99 0.983 - - 0.983 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
11. KIAA0195 KIAA0195 48 0.982 - - 0.982 - - - - - - -
12. AP3M1 ENSGALG00000005070 712 0.982 - - 0.982 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
13. PLEKHG5 ENSGALG00000027476 42 0.982 - - 0.982 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
14. MT1 MT1 218 0.981 - - 0.981 - - - - - - -
15. ENSGALG00000023180 ENSGALG00000023180 83 0.98 - - 0.980 - - - - - - -
16. MGMT ENSGALG00000042949 53 0.98 - - 0.980 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
17. TMEM97 ENSGALG00000005702 2037 0.979 - - 0.979 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
18. ATP2B2 ENSGALG00000030908 584 0.978 - - 0.978 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
19. GOLGA2 ENSGALG00000004881 677 0.978 - - 0.978 - - - - - - - golgin A2, transcript variant X7
20. ADAMTS2 ENSGALG00000032974 141 0.977 - - 0.977 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
21. LHFP 167 0.977 - - 0.977 - - - - - - - lipoma HMGIC fusion partner
22. PKP4 ENSGALG00000012561 3087 0.974 - - 0.974 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
23. C19H17ORF85 C19H17ORF85 2538 0.973 - - 0.973 - - - - - - -
24. SORCS1 ENSGALG00000008465 468 0.973 - - 0.973 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
25. NCAPD3 ENSGALG00000001491 221 0.972 - - 0.972 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
26. LGALS3 ENSGALG00000012173 3306 0.972 - - 0.972 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
27. ZNF423 ENSGALG00000003891 103 0.972 - - 0.972 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
28. C8H1ORF52 C8H1ORF52 118 0.971 - - 0.971 - - - - - - -
29. TRIM45 ENSGALG00000014818 1258 0.971 - - 0.971 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
30. LYPD6B ENSGALG00000028759 831 0.97 - - 0.970 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
31. ENTPD5 ENSGALG00000010202 69 0.97 - - 0.970 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
32. ZEB2 ENSGALG00000040465 315 0.968 - - 0.968 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
33. SULT2B1L1 ENSGALG00000023472 569 0.968 - - 0.968 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
34. EIF2AK2 ENSGALG00000010560 749 0.968 - - 0.968 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
35. LRP2 ENSGALG00000010858 363 0.966 - - 0.966 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
36. TSEN2 ENSGALG00000004981 1929 0.966 - - 0.966 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
37. TMEM38B ENSGALG00000027472 2465 0.965 - - 0.965 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
38. IP6K1 ENSGALG00000002510 827 0.963 - - 0.963 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
39. WDR11 ENSGALG00000035013 3393 0.963 - - 0.963 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
40. BMP2 ENSGALG00000029301 379 0.963 - - 0.963 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
41. FBXO34 ENSGALG00000032563 656 0.963 - - 0.963 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
42. GBGT1 ENSGALG00000003340 399 0.962 - - 0.962 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
43. CASP1 ENSGALG00000001049 1067 0.962 - - 0.962 - - - - - - - caspase 1, transcript variant X2
44. RAB3B ENSGALG00000010567 894 0.962 - - 0.962 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
45. CCDC25 ENSGALG00000016586 351 0.962 - - 0.962 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
46. Sep-02 Sep-02 206 0.962 - - 0.962 - - - - - - -
47. CXorf30 CXorf30 172 0.961 - - 0.961 - - - - - - -
48. MAN1A1 ENSGALG00000014878 1061 0.957 - - 0.957 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
49. SDCBP ENSGALG00000015436 1228 0.955 - - 0.955 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
50. SLC4A4 ENSGALG00000031105 534 0.955 - - 0.955 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
51. MYO18A ENSGALG00000003741 1023 0.955 - - 0.955 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
52. EXTL2 ENSGALG00000027984 808 0.954 - - 0.954 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
53. RUFY2 1442 0.953 - - 0.953 - - - - - - - RUN and FYVE domain containing 2, transcript variant X1
54. YLPM1 671 0.952 - - 0.952 - - - - - - - YLP motif containing 1
55. INTS9 ENSGALG00000016631 742 0.952 - - 0.952 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
56. VRTN ENSGALG00000010232 692 0.951 - - 0.951 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
57. TSN ENSGALG00000011652 905 0.951 - - 0.951 - - - - - - - translin [Source:NCBI gene;Acc:395955]
58. MSRA ENSGALG00000028032 2607 0.95 - - 0.950 - - - - - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
59. USP40 ENSGALG00000004228 1137 0.949 - - 0.949 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
60. AMMECR1L ENSGALG00000026728 2134 0.949 - - 0.949 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
61. ATG10 ENSGALG00000027714 1100 0.948 - - 0.948 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
62. LZIC ENSGALG00000002616 9052 0.947 - - 0.947 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
63. MAK16 ENSGALG00000001663 7455 0.946 - - 0.946 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
64. DAPK3 ENSGALG00000037733 6215 0.946 - - 0.946 - - - - - - - death-associated protein kinase 3, transcript variant X2
65. METTL13 ENSGALG00000003206 1503 0.943 - - 0.943 - - - - - - - methyltransferase like 13 [Source:HGNC Symbol;Acc:HGNC:24248]
66. EPB41 ENSGALG00000001329 787 0.943 - - 0.943 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
67. BCCIP ENSGALG00000006617 13291 0.943 - - 0.943 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
68. PCP4 ENSGALG00000022819 880 0.942 - - 0.942 - - - - - - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
69. KIAA0930 ENSGALG00000014226 1243 0.942 - - 0.942 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
70. NLGN1 ENSGALG00000040938 651 0.941 - - 0.941 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
71. DLX5 ENSGALG00000009129 1395 0.941 - - 0.941 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
72. C5H14ORF166 C5H14ORF166 24176 0.94 - - 0.940 - - - - - - -
73. TRIM37 ENSGALG00000005084 4036 0.94 - - 0.940 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
74. FRMD3 ENSGALG00000012577 999 0.94 - - 0.940 - - - - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
75. LRR1 ENSGALG00000012230 1062 0.938 - - 0.938 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
76. SYBU ENSGALG00000036527 1221 0.938 - - 0.938 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
77. OSGEPL1 ENSGALG00000037727 1879 0.938 - - 0.938 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
78. DDX18 ENSGALG00000012147 12463 0.937 - - 0.937 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
79. ZOV3 ZOV3 3267 0.937 - - 0.937 - - - - - - -
80. WDR89 ENSGALG00000011827 1481 0.934 - - 0.934 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
81. GNMT ENSGALG00000043290 3288 0.934 - - 0.934 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
82. WBSCR17 581 0.934 - - 0.934 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
83. TXNDC12 ENSGALG00000010569 13822 0.933 - - 0.933 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
84. RFNG ENSGALG00000002841 1643 0.933 - - 0.933 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
85. MPG ENSGALG00000028691 1874 0.933 - - 0.933 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
86. ZFAND2B ENSGALG00000029226 4107 0.932 - - 0.932 - - - - - - - zinc finger AN1-type containing 2B [Source:HGNC Symbol;Acc:HGNC:25206]
87. LMO4 ENSGALG00000006252 3686 0.931 - - 0.931 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
88. PDCD4 ENSGALG00000008700 574 0.93 - - 0.930 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
89. TGIF1 ENSGALG00000014795 2378 0.929 - - 0.929 - - - - - - - TGFB induced factor homeobox 1 [Source:NCBI gene;Acc:396339]
90. PIH1D3 ENSGALG00000004870 1365 0.929 - - 0.929 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
91. FBF1 ENSGALG00000002179 1738 0.929 - - 0.929 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
92. ZNF276 ENSGALG00000000513 2410 0.928 - - 0.928 - - - - - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
93. TMEM200C ENSGALG00000030210 1434 0.928 - - 0.928 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
94. ENSGALG00000028359 ENSGALG00000028359 479 0.927 - - 0.927 - - - - - - -
95. EYA3 ENSGALG00000000777 922 0.927 - - 0.927 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:NCBI gene;Acc:395717]
96. B3GNT7 ENSGALG00000007701 929 0.926 - - 0.926 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
97. PVALB1 PVALB1 267 0.925 - - 0.925 - - - - - - -
98. FOPNL ENSGALG00000006532 2922 0.925 - - 0.925 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
99. C5orf30 ENSGALG00000027512 1721 0.925 - - 0.925 - - - - - - - chromosome 5 open reading frame 30 [Source:HGNC Symbol;Acc:HGNC:25052]
100. TRANK1 ENSGALG00000037629 2268 0.925 - - 0.925 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]

There are 529 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA